RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 SMAPO00193 183 aa8.89□□□□□ -0.99
CLDND1-212ENST00000506885 LCE2BO14633 110 aa8.89□□□□□ -0.99
CLDND1-212ENST00000506885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.89□□□□□ -0.99
CLDND1-212ENST00000506885 EYA1Q99502 592 aa8.89□□□□□ -0.99
CLDND1-212ENST00000506885 GFRA3O60609 400 aa8.88□□□□□ -0.99
CLDND1-212ENST00000506885 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
CLDND1-212ENST00000506885 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
CLDND1-212ENST00000506885 DNAJB2P25686 324 aa8.87□□□□□ -0.99
CLDND1-212ENST00000506885 ZNF775Q96BV0 537 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-212ENST00000506885 SUPT5HO00267 1087 aaKnown RBP8.86□□□□□ -0.99
CLDND1-212ENST00000506885 GPR37O15354 613 aa8.86□□□□□ -0.99
CLDND1-212ENST00000506885 LMOD2Q6P5Q4 547 aa8.86□□□□□ -0.99
CLDND1-212ENST00000506885 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
CLDND1-212ENST00000506885 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
CLDND1-212ENST00000506885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.85□□□□□ -0.99
CLDND1-212ENST00000506885 C3orf80F5H4A9 247 aa8.85□□□□□ -0.99
CLDND1-212ENST00000506885 PPP4CP60510 307 aa8.85□□□□□ -0.99
CLDND1-212ENST00000506885 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
CLDND1-212ENST00000506885 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
CLDND1-212ENST00000506885 KCNC4Q03721 635 aa8.83□□□□□ -1
CLDND1-212ENST00000506885 PXYLP1Q8TE99 480 aa8.82□□□□□ -1
CLDND1-212ENST00000506885 MINK1Q8N4C8 1332 aaPredicted RBP8.81□□□□□ -1
CLDND1-212ENST00000506885 RCCD1A6NED2 376 aa8.81□□□□□ -1
CLDND1-212ENST00000506885 MAP2K5Q13163 448 aa8.81□□□□□ -1
CLDND1-212ENST00000506885 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
CLDND1-212ENST00000506885 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
CLDND1-212ENST00000506885 METTL3Q86U44 580 aaKnown RBP8.81□□□□□ -1
CLDND1-212ENST00000506885 TMEM134Q9H6X4 195 aa8.81□□□□□ -1
CLDND1-212ENST00000506885 FECHP22830 423 aa8.8□□□□□ -1
CLDND1-212ENST00000506885 PRR14Q9BWN1 585 aa8.8□□□□□ -1
CLDND1-212ENST00000506885 RNF40O75150 1001 aa8.79□□□□□ -1
CLDND1-212ENST00000506885 FAM161AQ3B820 660 aa8.78□□□□□ -1
CLDND1-212ENST00000506885 NRG2O14511 850 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-212ENST00000506885 IRF6O14896 467 aa8.77□□□□□ -1.01
CLDND1-212ENST00000506885 KRI1Q8N9T8 703 aaKnown RBP8.76□□□□□ -1.01
CLDND1-212ENST00000506885 ZC3H15Q8WU90 426 aaKnown RBP8.75□□□□□ -1.01
CLDND1-212ENST00000506885 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
CLDND1-212ENST00000506885 ZMYND10O75800 440 aa8.74□□□□□ -1.01
CLDND1-212ENST00000506885 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
CLDND1-212ENST00000506885 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
CLDND1-212ENST00000506885 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
CLDND1-212ENST00000506885 KMT5BQ4FZB7 885 aa8.73□□□□□ -1.01
CLDND1-212ENST00000506885 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-212ENST00000506885 CCDC102AQ96A19 550 aa8.7□□□□□ -1.02
CLDND1-212ENST00000506885 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
CLDND1-212ENST00000506885 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
CLDND1-212ENST00000506885 IL21Q9HBE4 155 aa8.69□□□□□ -1.02
CLDND1-212ENST00000506885 CLCN1P35523 988 aa8.68□□□□□ -1.02
CLDND1-212ENST00000506885 APLP1P51693 650 aa8.68□□□□□ -1.02
CLDND1-212ENST00000506885 ACTN4O43707 911 aaKnown RBP8.67□□□□□ -1.02
CLDND1-212ENST00000506885 CFHP08603 1231 aa8.67□□□□□ -1.02
CLDND1-212ENST00000506885 TRIM26Q12899 539 aaPredicted RBP8.67□□□□□ -1.02
CLDND1-212ENST00000506885 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
CLDND1-212ENST00000506885 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
CLDND1-212ENST00000506885 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
CLDND1-212ENST00000506885 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
CLDND1-212ENST00000506885 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
CLDND1-212ENST00000506885 SLC10A3P09131 477 aa8.65□□□□□ -1.02
CLDND1-212ENST00000506885 TJAP1Q5JTD0 557 aa8.65□□□□□ -1.02
CLDND1-212ENST00000506885 AK7Q96M32 723 aa8.65□□□□□ -1.02
CLDND1-212ENST00000506885 MTRQ99707 1265 aa8.65□□□□□ -1.02
CLDND1-212ENST00000506885 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
CLDND1-212ENST00000506885 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
CLDND1-212ENST00000506885 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
CLDND1-212ENST00000506885 GCGRP47871 477 aa8.62□□□□□ -1.03
CLDND1-212ENST00000506885 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
CLDND1-212ENST00000506885 NLRP7Q8WX94 980 aa8.62□□□□□ -1.03
CLDND1-212ENST00000506885 NR1I2O75469 434 aa8.61□□□□□ -1.03
CLDND1-212ENST00000506885 AMHR2Q16671 573 aa8.61□□□□□ -1.03
CLDND1-212ENST00000506885 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
CLDND1-212ENST00000506885 ZPR1O75312 459 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 CD46P15529 392 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 GGCXP38435 758 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 COPS2P61201 443 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
CLDND1-212ENST00000506885 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
CLDND1-212ENST00000506885 BLOC1S3Q6QNY0 202 aa8.58□□□□□ -1.04
CLDND1-212ENST00000506885 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
CLDND1-212ENST00000506885 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-212ENST00000506885 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-212ENST00000506885 TRIM66O15016 1216 aa8.57□□□□□ -1.04
CLDND1-212ENST00000506885 USP46P62068 366 aa8.57□□□□□ -1.04
CLDND1-212ENST00000506885 HRCP23327 699 aa8.56□□□□□ -1.04
CLDND1-212ENST00000506885 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
CLDND1-212ENST00000506885 KDM4AO75164 1064 aa8.55□□□□□ -1.04
CLDND1-212ENST00000506885 SSTR3P32745 418 aaPredicted RBP8.55□□□□□ -1.04
CLDND1-212ENST00000506885 FUT2Q10981 343 aa8.55□□□□□ -1.04
CLDND1-212ENST00000506885 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
CLDND1-212ENST00000506885 SCUBE3Q8IX30 993 aa8.54□□□□□ -1.04
CLDND1-212ENST00000506885 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
CLDND1-212ENST00000506885 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
CLDND1-212ENST00000506885 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-212ENST00000506885 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
CLDND1-212ENST00000506885 MORN1Q5T089 497 aa8.53□□□□□ -1.04
CLDND1-212ENST00000506885 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CLDND1-212ENST00000506885 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
CLDND1-212ENST00000506885 Q3C1V9 767 aa8.52□□□□□ -1.05
CLDND1-212ENST00000506885 PUS10Q3MIT2 529 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms