RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
SNCA-210ENST00000506691 JCADQ9P266 1359 aa16.36■□□□□ 0.21
SNCA-210ENST00000506691 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
SNCA-210ENST00000506691 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
SNCA-210ENST00000506691 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
SNCA-210ENST00000506691 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
SNCA-210ENST00000506691 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
SNCA-210ENST00000506691 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
SNCA-210ENST00000506691 POTEAQ6S8J7 498 aa16.33■□□□□ 0.2
SNCA-210ENST00000506691 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
SNCA-210ENST00000506691 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
SNCA-210ENST00000506691 SPATA31A6Q5VVP1 1343 aa16.32■□□□□ 0.2
SNCA-210ENST00000506691 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
SNCA-210ENST00000506691 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
SNCA-210ENST00000506691 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
SNCA-210ENST00000506691 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
SNCA-210ENST00000506691 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
SNCA-210ENST00000506691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNCA-210ENST00000506691 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
SNCA-210ENST00000506691 ITGAEP38570 1179 aa16.29■□□□□ 0.2
SNCA-210ENST00000506691 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNCA-210ENST00000506691 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
SNCA-210ENST00000506691 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
SNCA-210ENST00000506691 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
SNCA-210ENST00000506691 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.2
SNCA-210ENST00000506691 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
SNCA-210ENST00000506691 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
SNCA-210ENST00000506691 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
SNCA-210ENST00000506691 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
SNCA-210ENST00000506691 DCCP43146 1447 aa16.26■□□□□ 0.19
SNCA-210ENST00000506691 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
SNCA-210ENST00000506691 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
SNCA-210ENST00000506691 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
SNCA-210ENST00000506691 C19orf44Q9H6X5 657 aa16.24■□□□□ 0.19
SNCA-210ENST00000506691 UNC13BO14795 1591 aa16.24■□□□□ 0.19
SNCA-210ENST00000506691 ADAMTS13Q76LX8 1427 aa16.22■□□□□ 0.19
SNCA-210ENST00000506691 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
SNCA-210ENST00000506691 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
SNCA-210ENST00000506691 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
SNCA-210ENST00000506691 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
SNCA-210ENST00000506691 TRPM2O94759 1503 aa16.2■□□□□ 0.18
SNCA-210ENST00000506691 BCANQ96GW7 911 aa16.2■□□□□ 0.18
SNCA-210ENST00000506691 LRP6O75581 1613 aa16.19■□□□□ 0.18
SNCA-210ENST00000506691 HRCP23327 699 aa16.18■□□□□ 0.18
SNCA-210ENST00000506691 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
SNCA-210ENST00000506691 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
SNCA-210ENST00000506691 ATF3P18847 181 aa16.17■□□□□ 0.18
SNCA-210ENST00000506691 NAIPQ13075 1403 aa16.17■□□□□ 0.18
SNCA-210ENST00000506691 E9PCH4 1651 aa16.16■□□□□ 0.18
SNCA-210ENST00000506691 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
SNCA-210ENST00000506691 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
SNCA-210ENST00000506691 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
SNCA-210ENST00000506691 UPF1Q92900 1129 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNCA-210ENST00000506691 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
SNCA-210ENST00000506691 NHSL1Q5SYE7 1610 aa16.12■□□□□ 0.17
SNCA-210ENST00000506691 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
SNCA-210ENST00000506691 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
SNCA-210ENST00000506691 ASXL1Q8IXJ9 1541 aa16.11■□□□□ 0.17
SNCA-210ENST00000506691 RXRBP28702 533 aa16.11■□□□□ 0.17
SNCA-210ENST00000506691 BRINP3Q76B58 766 aa16.11■□□□□ 0.17
SNCA-210ENST00000506691 LRRC59Q96AG4 307 aaKnown RBP16.09■□□□□ 0.17
SNCA-210ENST00000506691 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
SNCA-210ENST00000506691 MST1RQ04912 1400 aa16.09■□□□□ 0.17
SNCA-210ENST00000506691 LAMC1P11047 1609 aa16.08■□□□□ 0.17
SNCA-210ENST00000506691 NRXN3Q9Y4C0 1643 aa16.08■□□□□ 0.17
SNCA-210ENST00000506691 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
SNCA-210ENST00000506691 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
SNCA-210ENST00000506691 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
SNCA-210ENST00000506691 NUP155O75694 1391 aa16.05■□□□□ 0.16
SNCA-210ENST00000506691 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
SNCA-210ENST00000506691 SPHKAPQ2M3C7 1700 aa16.04■□□□□ 0.16
SNCA-210ENST00000506691 RAB3GAP2Q9H2M9 1393 aa16.03■□□□□ 0.16
SNCA-210ENST00000506691 CHGAP10645 457 aaKnown RBP16.03■□□□□ 0.16
SNCA-210ENST00000506691 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
SNCA-210ENST00000506691 AFF2P51816 1311 aa16.02■□□□□ 0.16
SNCA-210ENST00000506691 PNPLA6Q8IY17 1366 aa16.01■□□□□ 0.15
SNCA-210ENST00000506691 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
SNCA-210ENST00000506691 FOXD1Q16676 465 aa16■□□□□ 0.15
SNCA-210ENST00000506691 NGLY1Q96IV0 654 aa16■□□□□ 0.15
SNCA-210ENST00000506691 RGS12O14924 1447 aa15.98■□□□□ 0.15
SNCA-210ENST00000506691 NALCNQ8IZF0 1738 aa15.98■□□□□ 0.15
SNCA-210ENST00000506691 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
SNCA-210ENST00000506691 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
SNCA-210ENST00000506691 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
SNCA-210ENST00000506691 METP08581 1390 aa15.98■□□□□ 0.15
SNCA-210ENST00000506691 NUTM2DQ5VT03 806 aaPredicted RBP15.96■□□□□ 0.15
SNCA-210ENST00000506691 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
SNCA-210ENST00000506691 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
SNCA-210ENST00000506691 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
SNCA-210ENST00000506691 SOS2Q07890 1332 aaPredicted RBP15.95■□□□□ 0.14
SNCA-210ENST00000506691 COL22A1Q8NFW1 1626 aaPredicted RBP15.95■□□□□ 0.14
SNCA-210ENST00000506691 NUTM2BA6NNL0 878 aaPredicted RBP15.95■□□□□ 0.14
SNCA-210ENST00000506691 NUTM2EB1AL46 878 aaPredicted RBP15.95■□□□□ 0.14
SNCA-210ENST00000506691 NUTM2AQ8IVF1 878 aaPredicted RBP15.95■□□□□ 0.14
SNCA-210ENST00000506691 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
SNCA-210ENST00000506691 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
SNCA-210ENST00000506691 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
SNCA-210ENST00000506691 KIF1BO60333 1816 aa15.93■□□□□ 0.14
SNCA-210ENST00000506691 C8orf37Q96NL8 207 aa15.92■□□□□ 0.14
SNCA-210ENST00000506691 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms