RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
GYPB-207ENST00000506679 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
GYPB-207ENST00000506679 TTLL12Q14166 644 aaPredicted RBP6.61□□□□□ -1.35
GYPB-207ENST00000506679 SWT1Q5T5J6 900 aaKnown RBP6.61□□□□□ -1.35
GYPB-207ENST00000506679 SAMD7Q7Z3H4 446 aa6.61□□□□□ -1.35
GYPB-207ENST00000506679 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
GYPB-207ENST00000506679 MS4A1P11836 297 aa6.6□□□□□ -1.35
GYPB-207ENST00000506679 NEUROD2Q15784 382 aa6.6□□□□□ -1.35
GYPB-207ENST00000506679 SPNS2Q8IVW8 549 aa6.6□□□□□ -1.35
GYPB-207ENST00000506679 SOWAHBA6NEL2 793 aa6.59□□□□□ -1.35
GYPB-207ENST00000506679 SLC10A3P09131 477 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 CD46P15529 392 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 SSTR3P32745 418 aaPredicted RBP6.58□□□□□ -1.36
GYPB-207ENST00000506679 SULF1Q8IWU6 871 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 SLF2Q8IX21 1173 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 ANKK1Q8NFD2 765 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 STAC3Q96MF2 364 aa6.58□□□□□ -1.36
GYPB-207ENST00000506679 THSD4Q6ZMP0 1018 aa6.57□□□□□ -1.36
GYPB-207ENST00000506679 WNT2BQ93097 391 aa6.57□□□□□ -1.36
GYPB-207ENST00000506679 LRCH3Q96II8 777 aa6.57□□□□□ -1.36
GYPB-207ENST00000506679 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.57□□□□□ -1.36
GYPB-207ENST00000506679 MYT1LQ9UL68 1186 aa6.57□□□□□ -1.36
GYPB-207ENST00000506679 GOLGA8CPA6NN73 597 aa6.56□□□□□ -1.36
GYPB-207ENST00000506679 BCAMP50895 628 aa6.56□□□□□ -1.36
GYPB-207ENST00000506679 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
GYPB-207ENST00000506679 DDX11L8A8MPP1 907 aa6.55□□□□□ -1.36
GYPB-207ENST00000506679 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
GYPB-207ENST00000506679 PLEKHG3A1L390 1219 aa6.54□□□□□ -1.36
GYPB-207ENST00000506679 KCTD12Q96CX2 325 aaKnown RBP6.54□□□□□ -1.36
GYPB-207ENST00000506679 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
GYPB-207ENST00000506679 TSR3Q9UJK0 312 aaKnown RBP6.54□□□□□ -1.36
GYPB-207ENST00000506679 GCGRP47871 477 aa6.53□□□□□ -1.36
GYPB-207ENST00000506679 SLC4A3P48751 1232 aa6.53□□□□□ -1.36
GYPB-207ENST00000506679 NECTIN2Q92692 538 aa6.53□□□□□ -1.36
GYPB-207ENST00000506679 BEGAINQ9BUH8 593 aa6.53□□□□□ -1.36
GYPB-207ENST00000506679 HPS5Q9UPZ3 1129 aa6.53□□□□□ -1.36
GYPB-207ENST00000506679 RSPH4AQ5TD94 716 aa6.52□□□□□ -1.37
GYPB-207ENST00000506679 RDH13Q8NBN7 331 aa6.52□□□□□ -1.37
GYPB-207ENST00000506679 RNF40O75150 1001 aa6.51□□□□□ -1.37
GYPB-207ENST00000506679 CFHP08603 1231 aa6.51□□□□□ -1.37
GYPB-207ENST00000506679 RNF166Q96A37 237 aaPredicted RBP6.51□□□□□ -1.37
GYPB-207ENST00000506679 WBP1LQ9NX94 342 aa6.51□□□□□ -1.37
GYPB-207ENST00000506679 APLP1P51693 650 aa6.5□□□□□ -1.37
GYPB-207ENST00000506679 PPP4CP60510 307 aa6.5□□□□□ -1.37
GYPB-207ENST00000506679 NYAP1Q6ZVC0 841 aa6.5□□□□□ -1.37
GYPB-207ENST00000506679 ACTN4O43707 911 aaKnown RBP6.49□□□□□ -1.37
GYPB-207ENST00000506679 KDM4AO75164 1064 aa6.49□□□□□ -1.37
GYPB-207ENST00000506679 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
GYPB-207ENST00000506679 TBC1D2Q9BYX2 928 aa6.49□□□□□ -1.37
GYPB-207ENST00000506679 GOPCQ9HD26 462 aa6.49□□□□□ -1.37
GYPB-207ENST00000506679 USP46P62068 366 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 DIXDC1Q155Q3 683 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 KMT5BQ4FZB7 885 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 SH3D19Q5HYK7 790 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 IL27Q8NEV9 243 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 PRR14Q9BWN1 585 aa6.48□□□□□ -1.37
GYPB-207ENST00000506679 HOXA2O43364 376 aa6.47□□□□□ -1.37
GYPB-207ENST00000506679 GJA5P36382 358 aa6.47□□□□□ -1.37
GYPB-207ENST00000506679 FUT2Q10981 343 aa6.47□□□□□ -1.37
GYPB-207ENST00000506679 MYSM1Q5VVJ2 828 aa6.47□□□□□ -1.37
GYPB-207ENST00000506679 PTPN5P54829 565 aa6.46□□□□□ -1.38
GYPB-207ENST00000506679 RSPH6AQ9H0K4 717 aa6.46□□□□□ -1.38
GYPB-207ENST00000506679 HCSTQ9UBK5 93 aa6.46□□□□□ -1.38
GYPB-207ENST00000506679 MOXD2PA6NHM9 499 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 SPTLC1O15269 473 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 ATP6V1AP38606 617 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 TUSC1Q2TAM9 212 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 MORN1Q5T089 497 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 NUTM1Q86Y26 1132 aa6.45□□□□□ -1.38
GYPB-207ENST00000506679 SKIV2LQ15477 1246 aaKnown RBP6.44□□□□□ -1.38
GYPB-207ENST00000506679 RSBN1LQ6PCB5 846 aaPredicted RBP6.44□□□□□ -1.38
GYPB-207ENST00000506679 HLA-CQ95604 372 aa6.44□□□□□ -1.38
GYPB-207ENST00000506679 CLK2P49760 499 aaKnown RBP6.43□□□□□ -1.38
GYPB-207ENST00000506679 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
GYPB-207ENST00000506679 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
GYPB-207ENST00000506679 PCDHB3Q9Y5E6 796 aa6.43□□□□□ -1.38
GYPB-207ENST00000506679 NDUFV2P19404 249 aa6.42□□□□□ -1.38
GYPB-207ENST00000506679 PUS10Q3MIT2 529 aaKnown RBP6.42□□□□□ -1.38
GYPB-207ENST00000506679 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
GYPB-207ENST00000506679 TJAP1Q5JTD0 557 aa6.42□□□□□ -1.38
GYPB-207ENST00000506679 RIC3Q7Z5B4 369 aa6.42□□□□□ -1.38
GYPB-207ENST00000506679 PCDHGC3Q9UN70 934 aa6.42□□□□□ -1.38
GYPB-207ENST00000506679 FDX1P10109 184 aa6.41□□□□□ -1.38
GYPB-207ENST00000506679 GUCA2AQ02747 115 aa6.41□□□□□ -1.38
GYPB-207ENST00000506679 BLOC1S3Q6QNY0 202 aa6.41□□□□□ -1.38
GYPB-207ENST00000506679 MTRQ99707 1265 aa6.41□□□□□ -1.38
GYPB-207ENST00000506679 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
GYPB-207ENST00000506679 SALL2Q9Y467 1007 aaPredicted RBP6.41□□□□□ -1.38
GYPB-207ENST00000506679 ITGBL1O95965 494 aaPredicted RBP6.4□□□□□ -1.38
GYPB-207ENST00000506679 PRPF38BQ5VTL8 546 aaKnown RBP6.4□□□□□ -1.38
GYPB-207ENST00000506679 PROCA1Q8NCQ7 364 aaPredicted RBP6.4□□□□□ -1.38
GYPB-207ENST00000506679 THAP11Q96EK4 314 aa6.4□□□□□ -1.38
GYPB-207ENST00000506679 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
GYPB-207ENST00000506679 NR1I2O75469 434 aa6.39□□□□□ -1.39
GYPB-207ENST00000506679 FBXO31Q5XUX0 539 aaPredicted RBP6.39□□□□□ -1.39
GYPB-207ENST00000506679 SCUBE3Q8IX30 993 aa6.39□□□□□ -1.39
GYPB-207ENST00000506679 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
GYPB-207ENST00000506679 LILRB3O75022 631 aa6.38□□□□□ -1.39
GYPB-207ENST00000506679 ZPR1O75312 459 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms