RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 NLRP7Q8WX94 980 aa15.21■□□□□ 0.03
RETREG1-203ENST00000506441 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
RETREG1-203ENST00000506441 LSM11P83369 360 aaKnown RBP eCLIP15.2■□□□□ 0.02
RETREG1-203ENST00000506441 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
RETREG1-203ENST00000506441 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
RETREG1-203ENST00000506441 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
RETREG1-203ENST00000506441 SEPT9Q9UHD8 586 aaPredicted RBP15.17■□□□□ 0.02
RETREG1-203ENST00000506441 POTEB3A0JP26 581 aa15.16■□□□□ 0.02
RETREG1-203ENST00000506441 GOLGA8CPA6NN73 597 aa15.16■□□□□ 0.02
RETREG1-203ENST00000506441 POTEBQ6S5H4 581 aa15.16■□□□□ 0.02
RETREG1-203ENST00000506441 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
RETREG1-203ENST00000506441 LCE2DQ5TA82 110 aaPredicted RBP15.15■□□□□ 0.02
RETREG1-203ENST00000506441 ADGRD1Q6QNK2 874 aa15.15■□□□□ 0.02
RETREG1-203ENST00000506441 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
RETREG1-203ENST00000506441 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
RETREG1-203ENST00000506441 C3orf80F5H4A9 247 aa15.14■□□□□ 0.01
RETREG1-203ENST00000506441 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
RETREG1-203ENST00000506441 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
RETREG1-203ENST00000506441 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
RETREG1-203ENST00000506441 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
RETREG1-203ENST00000506441 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
RETREG1-203ENST00000506441 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
RETREG1-203ENST00000506441 SWT1Q5T5J6 900 aaKnown RBP15.11■□□□□ 0.01
RETREG1-203ENST00000506441 CD46P15529 392 aa15.1■□□□□ 0.01
RETREG1-203ENST00000506441 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
RETREG1-203ENST00000506441 SKIV2LQ15477 1246 aaKnown RBP15.08■□□□□ 0
RETREG1-203ENST00000506441 ZFRQ96KR1 1074 aaKnown RBP15.08■□□□□ 0
RETREG1-203ENST00000506441 SAMD7Q7Z3H4 446 aa15.05■□□□□ -0
RETREG1-203ENST00000506441 LRCH3Q96II8 777 aa15.05■□□□□ -0
RETREG1-203ENST00000506441 USP46P62068 366 aa15.04■□□□□ -0
RETREG1-203ENST00000506441 ANKK1Q8NFD2 765 aa15.04■□□□□ -0
RETREG1-203ENST00000506441 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
RETREG1-203ENST00000506441 RNF40O75150 1001 aa15.03■□□□□ -0
RETREG1-203ENST00000506441 GRIPAP1Q4V328 841 aa15.03■□□□□ -0
RETREG1-203ENST00000506441 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.03■□□□□ -0
RETREG1-203ENST00000506441 HRO43593 1189 aa15.02■□□□□ -0
RETREG1-203ENST00000506441 KDM4AO75164 1064 aa15□□□□□ -0.01
RETREG1-203ENST00000506441 GCGRP47871 477 aa15□□□□□ -0.01
RETREG1-203ENST00000506441 KMT5BQ4FZB7 885 aa15□□□□□ -0.01
RETREG1-203ENST00000506441 PRR14Q9BWN1 585 aa15□□□□□ -0.01
RETREG1-203ENST00000506441 SPIRE2Q8WWL2 714 aa14.99□□□□□ -0.01
RETREG1-203ENST00000506441 MYSM1Q5VVJ2 828 aa14.98□□□□□ -0.01
RETREG1-203ENST00000506441 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
RETREG1-203ENST00000506441 CLK2P49760 499 aaKnown RBP14.97□□□□□ -0.01
RETREG1-203ENST00000506441 GJA5P36382 358 aa14.96□□□□□ -0.01
RETREG1-203ENST00000506441 PPP4CP60510 307 aa14.95□□□□□ -0.02
RETREG1-203ENST00000506441 POTEGQ6S5H5 508 aa14.95□□□□□ -0.02
RETREG1-203ENST00000506441 RIC3Q7Z5B4 369 aa14.95□□□□□ -0.02
RETREG1-203ENST00000506441 SLC10A3P09131 477 aa14.94□□□□□ -0.02
RETREG1-203ENST00000506441 WNT2BQ93097 391 aa14.94□□□□□ -0.02
RETREG1-203ENST00000506441 POTEMA6NI47 508 aa14.92□□□□□ -0.02
RETREG1-203ENST00000506441 CFHP08603 1231 aa14.92□□□□□ -0.02
RETREG1-203ENST00000506441 TUSC1Q2TAM9 212 aa14.92□□□□□ -0.02
RETREG1-203ENST00000506441 SOWAHBA6NEL2 793 aa14.91□□□□□ -0.02
RETREG1-203ENST00000506441 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
RETREG1-203ENST00000506441 SPTLC1O15269 473 aa14.9□□□□□ -0.02
RETREG1-203ENST00000506441 KRTAP3-3Q9BYR6 98 aa14.89□□□□□ -0.03
RETREG1-203ENST00000506441 KRTAP3-2Q9BYR7 98 aa14.89□□□□□ -0.03
RETREG1-203ENST00000506441 TSR3Q9UJK0 312 aaKnown RBP14.89□□□□□ -0.03
RETREG1-203ENST00000506441 ATP6V1AP38606 617 aa14.88□□□□□ -0.03
RETREG1-203ENST00000506441 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
RETREG1-203ENST00000506441 MOXD2PA6NHM9 499 aa14.87□□□□□ -0.03
RETREG1-203ENST00000506441 FLIIQ13045 1269 aa14.87□□□□□ -0.03
RETREG1-203ENST00000506441 RSBN1LQ6PCB5 846 aaPredicted RBP14.87□□□□□ -0.03
RETREG1-203ENST00000506441 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
RETREG1-203ENST00000506441 PROCA1Q8NCQ7 364 aaPredicted RBP14.86□□□□□ -0.03
RETREG1-203ENST00000506441 HOXA2O43364 376 aa14.85□□□□□ -0.03
RETREG1-203ENST00000506441 FDX1P10109 184 aa14.85□□□□□ -0.03
RETREG1-203ENST00000506441 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
RETREG1-203ENST00000506441 NUTM2BA6NNL0 878 aaPredicted RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 NUTM2EB1AL46 878 aaPredicted RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 ACTN4O43707 911 aaKnown RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 NUTM2DQ5VT03 806 aaPredicted RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 PRPF38BQ5VTL8 546 aaKnown RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 NUTM2AQ8IVF1 878 aaPredicted RBP14.83□□□□□ -0.04
RETREG1-203ENST00000506441 NDUFV2P19404 249 aa14.82□□□□□ -0.04
RETREG1-203ENST00000506441 FUT2Q10981 343 aa14.82□□□□□ -0.04
RETREG1-203ENST00000506441 TMEM259Q4ZIN3 620 aa14.82□□□□□ -0.04
RETREG1-203ENST00000506441 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
RETREG1-203ENST00000506441 LIMD1Q9UGP4 676 aa14.82□□□□□ -0.04
RETREG1-203ENST00000506441 BCAMP50895 628 aa14.81□□□□□ -0.04
RETREG1-203ENST00000506441 NYAP1Q6ZVC0 841 aa14.81□□□□□ -0.04
RETREG1-203ENST00000506441 ZBTB3Q9H5J0 574 aa14.81□□□□□ -0.04
RETREG1-203ENST00000506441 SPDYE5A6NIY4 337 aa14.8□□□□□ -0.04
RETREG1-203ENST00000506441 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
RETREG1-203ENST00000506441 Q3C1V9 767 aa14.79□□□□□ -0.04
RETREG1-203ENST00000506441 PPP2R2DQ66LE6 453 aa14.78□□□□□ -0.04
RETREG1-203ENST00000506441 KCTD12Q96CX2 325 aaKnown RBP14.78□□□□□ -0.04
RETREG1-203ENST00000506441 THSD4Q6ZMP0 1018 aa14.76□□□□□ -0.05
RETREG1-203ENST00000506441 BANK1Q8NDB2 785 aa14.75□□□□□ -0.05
RETREG1-203ENST00000506441 PCDHB3Q9Y5E6 796 aa14.75□□□□□ -0.05
RETREG1-203ENST00000506441 LILRB3O75022 631 aa14.74□□□□□ -0.05
RETREG1-203ENST00000506441 NR1I2O75469 434 aa14.74□□□□□ -0.05
RETREG1-203ENST00000506441 RFC5P40937 340 aa14.74□□□□□ -0.05
RETREG1-203ENST00000506441 MTMR2Q13614 643 aa14.74□□□□□ -0.05
RETREG1-203ENST00000506441 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
RETREG1-203ENST00000506441 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
RETREG1-203ENST00000506441 APBB1O00213 710 aa14.72□□□□□ -0.05
RETREG1-203ENST00000506441 HRCP23327 699 aa14.71□□□□□ -0.05
RETREG1-203ENST00000506441 MORN1Q5T089 497 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms