RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ITGBL1O95965 494 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 OATP04181 439 aa6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 MDM2Q00987 491 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 CERKQ8TCT0 537 aa6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 TMUB1Q9BVT8 246 aa6.06□□□□□ -1.44
TRAPPC11-205ENST00000506426 SSTR3P32745 418 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC11-205ENST00000506426 SH3D19Q5HYK7 790 aa6.05□□□□□ -1.44
TRAPPC11-205ENST00000506426 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
TRAPPC11-205ENST00000506426 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC11-205ENST00000506426 KIAA1468Q9P260 1216 aa6.04□□□□□ -1.44
TRAPPC11-205ENST00000506426 RABGEF1Q9UJ41 708 aa6.04□□□□□ -1.44
TRAPPC11-205ENST00000506426 SOWAHBA6NEL2 793 aa6.03□□□□□ -1.44
TRAPPC11-205ENST00000506426 SKIV2LQ15477 1246 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-205ENST00000506426 C6orf132Q5T0Z8 1188 aa6.03□□□□□ -1.44
TRAPPC11-205ENST00000506426 PHOX2BQ99453 314 aa6.03□□□□□ -1.44
TRAPPC11-205ENST00000506426 PPP1R3GB7ZBB8 358 aa6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 ONECUT3O60422 494 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 METTL3Q86U44 580 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 ZFRQ96KR1 1074 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 BEGAINQ9BUH8 593 aa6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 ATP1B4Q9UN42 357 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC11-205ENST00000506426 PADI6Q6TGC4 694 aa6.01□□□□□ -1.45
TRAPPC11-205ENST00000506426 FAM217BQ9NTX9 383 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC11-205ENST00000506426 A6NJR5 290 aa6□□□□□ -1.45
TRAPPC11-205ENST00000506426 KCNC4Q03721 635 aa6□□□□□ -1.45
TRAPPC11-205ENST00000506426 FAM161AQ3B820 660 aa6□□□□□ -1.45
TRAPPC11-205ENST00000506426 PXYLP1Q8TE99 480 aa6□□□□□ -1.45
TRAPPC11-205ENST00000506426 RBM27Q9P2N5 1060 aaKnown RBP6□□□□□ -1.45
TRAPPC11-205ENST00000506426 ADGRG1Q9Y653 693 aa6□□□□□ -1.45
TRAPPC11-205ENST00000506426 APBB1O00213 710 aa5.99□□□□□ -1.45
TRAPPC11-205ENST00000506426 UBTFP17480 764 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-205ENST00000506426 TTC13Q8NBP0 860 aa5.99□□□□□ -1.45
TRAPPC11-205ENST00000506426 RBM46Q8TBY0 533 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-205ENST00000506426 ARID3AQ99856 593 aa5.99□□□□□ -1.45
TRAPPC11-205ENST00000506426 GFRA3O60609 400 aa5.98□□□□□ -1.45
TRAPPC11-205ENST00000506426 PRSS12P56730 875 aa5.98□□□□□ -1.45
TRAPPC11-205ENST00000506426 DIXDC1Q155Q3 683 aa5.98□□□□□ -1.45
TRAPPC11-205ENST00000506426 POLR3EQ9NVU0 708 aa5.98□□□□□ -1.45
TRAPPC11-205ENST00000506426 ARID3CA6NKF2 412 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 TRAK2O60296 914 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 MCM6Q14566 821 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 TRAF7Q6Q0C0 670 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 PROCA1Q8NCQ7 364 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 NLRP7Q8WX94 980 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 C1orf115Q9H7X2 142 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
TRAPPC11-205ENST00000506426 MYSM1Q5VVJ2 828 aa5.96□□□□□ -1.46
TRAPPC11-205ENST00000506426 LAPTM4BQ86VI4 370 aa5.96□□□□□ -1.46
TRAPPC11-205ENST00000506426 CLUAP1Q96AJ1 413 aa5.96□□□□□ -1.46
TRAPPC11-205ENST00000506426 CDCA7LQ96GN5 454 aa5.96□□□□□ -1.46
TRAPPC11-205ENST00000506426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.95□□□□□ -1.46
TRAPPC11-205ENST00000506426 RAD21O60216 631 aa5.95□□□□□ -1.46
TRAPPC11-205ENST00000506426 CLK2P49760 499 aaKnown RBP5.95□□□□□ -1.46
TRAPPC11-205ENST00000506426 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.95□□□□□ -1.46
TRAPPC11-205ENST00000506426 TBC1D2Q9BYX2 928 aa5.95□□□□□ -1.46
TRAPPC11-205ENST00000506426 C3orf80F5H4A9 247 aa5.94□□□□□ -1.46
TRAPPC11-205ENST00000506426 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC11-205ENST00000506426 TSR3Q9UJK0 312 aaKnown RBP5.94□□□□□ -1.46
TRAPPC11-205ENST00000506426 TRIM6-TRIM34B2RNG4 842 aa5.93□□□□□ -1.46
TRAPPC11-205ENST00000506426 SMAPO00193 183 aa5.93□□□□□ -1.46
TRAPPC11-205ENST00000506426 FAM98CQ17RN3 349 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-205ENST00000506426 BANK1Q8NDB2 785 aa5.93□□□□□ -1.46
TRAPPC11-205ENST00000506426 PRKD2Q9BZL6 878 aa5.93□□□□□ -1.46
TRAPPC11-205ENST00000506426 RCCD1A6NED2 376 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 SPDYE5A6NIY4 337 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 TMEM259Q4ZIN3 620 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 TJAP1Q5JTD0 557 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 PROSER2Q86WR7 435 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 LRCH3Q96II8 777 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 TSKSQ9UJT2 592 aa5.92□□□□□ -1.46
TRAPPC11-205ENST00000506426 RFC5P40937 340 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 NYAP1Q6ZVC0 841 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 RIC3Q7Z5B4 369 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 NUTM1Q86Y26 1132 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 SULF1Q8IWU6 871 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 SPIRE2Q8WWL2 714 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 ZNF516Q92618 1163 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 EYA1Q99502 592 aa5.91□□□□□ -1.46
TRAPPC11-205ENST00000506426 CD46P15529 392 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 DNAJB2P25686 324 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 PPP2R2DQ66LE6 453 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 PPP1R18Q6NYC8 613 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 PACS2Q86VP3 889 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 FAM198AQ9UFP1 575 aa5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 ZNF777Q9ULD5 760 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-205ENST00000506426 NBPF26B4DH59 902 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 TUSC1Q2TAM9 212 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 NUDT18Q6ZVK8 323 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 SAMD7Q7Z3H4 446 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 CCDC82Q8N4S0 544 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 NKX2-3Q8TAU0 364 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 POM121Q96HA1 1249 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 LIMD1Q9UGP4 676 aa5.89□□□□□ -1.47
TRAPPC11-205ENST00000506426 DDX11L8A8MPP1 907 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 SPTLC1O15269 473 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 PPP4CP60510 307 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 LAPTM4AQ15012 233 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 FNBP4Q8N3X1 1017 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 TATDN2Q93075 761 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms