RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
TRIM23-205ENST00000506400 SLIT1O75093 1534 aa16.15■□□□□ 0.18
TRIM23-205ENST00000506400 RIMS2Q9UQ26 1411 aa16.15■□□□□ 0.18
TRIM23-205ENST00000506400 EID1Q9Y6B2 187 aa16.15■□□□□ 0.18
TRIM23-205ENST00000506400 ARHGAP23Q9P227 1491 aa16.15■□□□□ 0.18
TRIM23-205ENST00000506400 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
TRIM23-205ENST00000506400 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
TRIM23-205ENST00000506400 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
TRIM23-205ENST00000506400 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
TRIM23-205ENST00000506400 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
TRIM23-205ENST00000506400 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
TRIM23-205ENST00000506400 NEXMIFQ5QGS0 1516 aa16.12■□□□□ 0.17
TRIM23-205ENST00000506400 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
TRIM23-205ENST00000506400 HSPA2P54652 639 aa16.11■□□□□ 0.17
TRIM23-205ENST00000506400 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
TRIM23-205ENST00000506400 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
TRIM23-205ENST00000506400 MYOM2P54296 1465 aa16.1■□□□□ 0.17
TRIM23-205ENST00000506400 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
TRIM23-205ENST00000506400 LTKP29376 864 aa16.09■□□□□ 0.17
TRIM23-205ENST00000506400 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
TRIM23-205ENST00000506400 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
TRIM23-205ENST00000506400 PPLO60437 1756 aa16.08■□□□□ 0.16
TRIM23-205ENST00000506400 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
TRIM23-205ENST00000506400 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
TRIM23-205ENST00000506400 NCKAP5LQ9HCH0 1330 aa16.06■□□□□ 0.16
TRIM23-205ENST00000506400 MED14O60244 1454 aa16.05■□□□□ 0.16
TRIM23-205ENST00000506400 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
TRIM23-205ENST00000506400 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
TRIM23-205ENST00000506400 BCANQ96GW7 911 aa16.04■□□□□ 0.16
TRIM23-205ENST00000506400 NPHP4O75161 1426 aaPredicted RBP16.03■□□□□ 0.16
TRIM23-205ENST00000506400 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
TRIM23-205ENST00000506400 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
TRIM23-205ENST00000506400 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
TRIM23-205ENST00000506400 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
TRIM23-205ENST00000506400 SETBP1Q9Y6X0 1596 aa16■□□□□ 0.15
TRIM23-205ENST00000506400 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
TRIM23-205ENST00000506400 TBX22Q9Y458 520 aa16■□□□□ 0.15
TRIM23-205ENST00000506400 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
TRIM23-205ENST00000506400 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
TRIM23-205ENST00000506400 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
TRIM23-205ENST00000506400 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
TRIM23-205ENST00000506400 LAMC1P11047 1609 aa15.97■□□□□ 0.15
TRIM23-205ENST00000506400 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
TRIM23-205ENST00000506400 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
TRIM23-205ENST00000506400 IQGAP1P46940 1657 aa15.97■□□□□ 0.15
TRIM23-205ENST00000506400 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
TRIM23-205ENST00000506400 NRXN3Q9Y4C0 1643 aa15.96■□□□□ 0.15
TRIM23-205ENST00000506400 KIAA1210Q9ULL0 1709 aa15.94■□□□□ 0.14
TRIM23-205ENST00000506400 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
TRIM23-205ENST00000506400 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
TRIM23-205ENST00000506400 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
TRIM23-205ENST00000506400 ROCK2O75116 1388 aaKnown RBP15.92■□□□□ 0.14
TRIM23-205ENST00000506400 METP08581 1390 aa15.91■□□□□ 0.14
TRIM23-205ENST00000506400 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
TRIM23-205ENST00000506400 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
TRIM23-205ENST00000506400 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
TRIM23-205ENST00000506400 SETD1AO15047 1707 aaKnown RBP15.89■□□□□ 0.13
TRIM23-205ENST00000506400 ADGRB1O14514 1584 aa15.89■□□□□ 0.13
TRIM23-205ENST00000506400 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
TRIM23-205ENST00000506400 LRPPRCP42704 1394 aaKnown RBP15.88■□□□□ 0.13
TRIM23-205ENST00000506400 YTHDC2Q9H6S0 1430 aaKnown RBP15.88■□□□□ 0.13
TRIM23-205ENST00000506400 KCNA6P17658 529 aa15.88■□□□□ 0.13
TRIM23-205ENST00000506400 ASXL1Q8IXJ9 1541 aa15.88■□□□□ 0.13
TRIM23-205ENST00000506400 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
TRIM23-205ENST00000506400 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
TRIM23-205ENST00000506400 STK26Q9P289 416 aa15.86■□□□□ 0.13
TRIM23-205ENST00000506400 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
TRIM23-205ENST00000506400 SIRT1Q96EB6 747 aa15.85■□□□□ 0.13
TRIM23-205ENST00000506400 TRAK1Q9UPV9 953 aa15.84■□□□□ 0.13
TRIM23-205ENST00000506400 TECPR2O15040 1411 aa15.84■□□□□ 0.13
TRIM23-205ENST00000506400 NWD1Q149M9 1564 aa15.83■□□□□ 0.13
TRIM23-205ENST00000506400 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
TRIM23-205ENST00000506400 PTCH1Q13635 1447 aa15.82■□□□□ 0.12
TRIM23-205ENST00000506400 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
TRIM23-205ENST00000506400 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
TRIM23-205ENST00000506400 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
TRIM23-205ENST00000506400 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
TRIM23-205ENST00000506400 CPS1P31327 1500 aa15.81■□□□□ 0.12
TRIM23-205ENST00000506400 FAM135BQ49AJ0 1406 aa15.81■□□□□ 0.12
TRIM23-205ENST00000506400 KNDC1Q76NI1 1749 aa15.81■□□□□ 0.12
TRIM23-205ENST00000506400 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
TRIM23-205ENST00000506400 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM23-205ENST00000506400 USP47Q96K76 1375 aa15.79■□□□□ 0.12
TRIM23-205ENST00000506400 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
TRIM23-205ENST00000506400 POGKQ9P215 609 aa15.79■□□□□ 0.12
TRIM23-205ENST00000506400 ROBO2Q9HCK4 1378 aa15.78■□□□□ 0.12
TRIM23-205ENST00000506400 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
TRIM23-205ENST00000506400 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.12
TRIM23-205ENST00000506400 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.11
TRIM23-205ENST00000506400 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
TRIM23-205ENST00000506400 WAPLQ7Z5K2 1190 aa15.76■□□□□ 0.11
TRIM23-205ENST00000506400 ARHGEF28Q8N1W1 1705 aaKnown RBP15.75■□□□□ 0.11
TRIM23-205ENST00000506400 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
TRIM23-205ENST00000506400 STRCP1A6NGW2 1772 aa15.74■□□□□ 0.11
TRIM23-205ENST00000506400 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
TRIM23-205ENST00000506400 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
TRIM23-205ENST00000506400 LTBP4Q8N2S1 1624 aa15.73■□□□□ 0.11
TRIM23-205ENST00000506400 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
TRIM23-205ENST00000506400 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
TRIM23-205ENST00000506400 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms