RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
TRIM6-208ENST00000506134 SPATA31E1Q6ZUB1 1445 aa14.29□□□□□ -0.12
TRIM6-208ENST00000506134 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
TRIM6-208ENST00000506134 LTKP29376 864 aa14.28□□□□□ -0.12
TRIM6-208ENST00000506134 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
TRIM6-208ENST00000506134 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
TRIM6-208ENST00000506134 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
TRIM6-208ENST00000506134 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
TRIM6-208ENST00000506134 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
TRIM6-208ENST00000506134 RIMS2Q9UQ26 1411 aa14.25□□□□□ -0.13
TRIM6-208ENST00000506134 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
TRIM6-208ENST00000506134 EID1Q9Y6B2 187 aa14.25□□□□□ -0.13
TRIM6-208ENST00000506134 RPGRIP1LQ68CZ1 1315 aa14.25□□□□□ -0.13
TRIM6-208ENST00000506134 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
TRIM6-208ENST00000506134 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
TRIM6-208ENST00000506134 SLIT1O75093 1534 aa14.23□□□□□ -0.13
TRIM6-208ENST00000506134 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRIM6-208ENST00000506134 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
TRIM6-208ENST00000506134 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
TRIM6-208ENST00000506134 ZFYVE9O95405 1425 aa14.23□□□□□ -0.13
TRIM6-208ENST00000506134 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
TRIM6-208ENST00000506134 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
TRIM6-208ENST00000506134 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
TRIM6-208ENST00000506134 NEXMIFQ5QGS0 1516 aa14.21□□□□□ -0.13
TRIM6-208ENST00000506134 ADGRF5Q8IZF2 1346 aa14.21□□□□□ -0.14
TRIM6-208ENST00000506134 STRCQ7RTU9 1775 aa14.2□□□□□ -0.14
TRIM6-208ENST00000506134 BCANQ96GW7 911 aa14.2□□□□□ -0.14
TRIM6-208ENST00000506134 SCAF11Q99590 1463 aaKnown RBP14.2□□□□□ -0.14
TRIM6-208ENST00000506134 PPLO60437 1756 aa14.18□□□□□ -0.14
TRIM6-208ENST00000506134 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
TRIM6-208ENST00000506134 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
TRIM6-208ENST00000506134 NPHP4O75161 1426 aaPredicted RBP14.16□□□□□ -0.14
TRIM6-208ENST00000506134 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
TRIM6-208ENST00000506134 IFT172Q9UG01 1749 aa14.16□□□□□ -0.14
TRIM6-208ENST00000506134 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
TRIM6-208ENST00000506134 STAC3Q96MF2 364 aa14.16□□□□□ -0.14
TRIM6-208ENST00000506134 MED14O60244 1454 aa14.16□□□□□ -0.14
TRIM6-208ENST00000506134 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
TRIM6-208ENST00000506134 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
TRIM6-208ENST00000506134 MYOM2P54296 1465 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 NBPF8Q3BBV2 869 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
TRIM6-208ENST00000506134 TBX22Q9Y458 520 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 ADAMTS13Q76LX8 1427 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
TRIM6-208ENST00000506134 IQGAP1P46940 1657 aa14.11□□□□□ -0.15
TRIM6-208ENST00000506134 PIK3C2GO75747 1445 aa14.1□□□□□ -0.15
TRIM6-208ENST00000506134 NRXN3Q9Y4C0 1643 aa14.1□□□□□ -0.15
TRIM6-208ENST00000506134 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
TRIM6-208ENST00000506134 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
TRIM6-208ENST00000506134 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
TRIM6-208ENST00000506134 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
TRIM6-208ENST00000506134 METP08581 1390 aa14.08□□□□□ -0.15
TRIM6-208ENST00000506134 NBPF1Q3BBV0 1214 aa14.08□□□□□ -0.16
TRIM6-208ENST00000506134 ZNF335Q9H4Z2 1342 aaPredicted RBP14.05□□□□□ -0.16
TRIM6-208ENST00000506134 STK26Q9P289 416 aa14.05□□□□□ -0.16
TRIM6-208ENST00000506134 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
TRIM6-208ENST00000506134 KCNA6P17658 529 aa14.04□□□□□ -0.16
TRIM6-208ENST00000506134 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
TRIM6-208ENST00000506134 SETD1AO15047 1707 aaKnown RBP14.03□□□□□ -0.16
TRIM6-208ENST00000506134 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
TRIM6-208ENST00000506134 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
TRIM6-208ENST00000506134 PIK3R4Q99570 1358 aa14.02□□□□□ -0.17
TRIM6-208ENST00000506134 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
TRIM6-208ENST00000506134 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
TRIM6-208ENST00000506134 TRAK1Q9UPV9 953 aa14□□□□□ -0.17
TRIM6-208ENST00000506134 ADGRB1O14514 1584 aa14□□□□□ -0.17
TRIM6-208ENST00000506134 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
TRIM6-208ENST00000506134 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
TRIM6-208ENST00000506134 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
TRIM6-208ENST00000506134 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
TRIM6-208ENST00000506134 LAMC1P11047 1609 aa13.99□□□□□ -0.17
TRIM6-208ENST00000506134 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
TRIM6-208ENST00000506134 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
TRIM6-208ENST00000506134 YTHDC2Q9H6S0 1430 aaKnown RBP13.99□□□□□ -0.17
TRIM6-208ENST00000506134 PROSER2Q86WR7 435 aaPredicted RBP13.98□□□□□ -0.17
TRIM6-208ENST00000506134 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
TRIM6-208ENST00000506134 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
TRIM6-208ENST00000506134 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
TRIM6-208ENST00000506134 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
TRIM6-208ENST00000506134 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.17
TRIM6-208ENST00000506134 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.17
TRIM6-208ENST00000506134 ZEB1P37275 1124 aaPredicted RBP13.96□□□□□ -0.18
TRIM6-208ENST00000506134 SIRT1Q96EB6 747 aa13.96□□□□□ -0.18
TRIM6-208ENST00000506134 GPRASP1Q5JY77 1395 aa13.96□□□□□ -0.18
TRIM6-208ENST00000506134 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
TRIM6-208ENST00000506134 NWD1Q149M9 1564 aa13.95□□□□□ -0.18
TRIM6-208ENST00000506134 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
TRIM6-208ENST00000506134 XRN1Q8IZH2 1706 aaKnown RBP13.94□□□□□ -0.18
TRIM6-208ENST00000506134 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
TRIM6-208ENST00000506134 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRIM6-208ENST00000506134 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
TRIM6-208ENST00000506134 TECPR2O15040 1411 aa13.93□□□□□ -0.18
TRIM6-208ENST00000506134 POGKQ9P215 609 aa13.93□□□□□ -0.18
TRIM6-208ENST00000506134 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
TRIM6-208ENST00000506134 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
TRIM6-208ENST00000506134 CPS1P31327 1500 aa13.92□□□□□ -0.18
TRIM6-208ENST00000506134 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
TRIM6-208ENST00000506134 NKTRP30414 1462 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms