RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 KDM5AP29375 1690 aaKnown RBP12.75□□□□□ -0.37
SNF8-204ENST00000506104 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
SNF8-204ENST00000506104 ITGAEP38570 1179 aa12.74□□□□□ -0.37
SNF8-204ENST00000506104 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
SNF8-204ENST00000506104 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
SNF8-204ENST00000506104 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
SNF8-204ENST00000506104 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
SNF8-204ENST00000506104 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
SNF8-204ENST00000506104 SLC52A1Q9NWF4 448 aa12.73□□□□□ -0.37
SNF8-204ENST00000506104 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
SNF8-204ENST00000506104 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
SNF8-204ENST00000506104 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
SNF8-204ENST00000506104 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
SNF8-204ENST00000506104 TET3O43151 1660 aa12.71□□□□□ -0.37
SNF8-204ENST00000506104 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
SNF8-204ENST00000506104 NOS1P29475 1434 aa12.71□□□□□ -0.38
SNF8-204ENST00000506104 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
SNF8-204ENST00000506104 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
SNF8-204ENST00000506104 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
SNF8-204ENST00000506104 PLEKHG1Q9ULL1 1385 aa12.68□□□□□ -0.38
SNF8-204ENST00000506104 ADGRL2O95490 1459 aa12.67□□□□□ -0.38
SNF8-204ENST00000506104 TMEM131LA2VDJ0 1609 aa12.67□□□□□ -0.38
SNF8-204ENST00000506104 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
SNF8-204ENST00000506104 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
SNF8-204ENST00000506104 ATF3P18847 181 aa12.67□□□□□ -0.38
SNF8-204ENST00000506104 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
SNF8-204ENST00000506104 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNF8-204ENST00000506104 E9PCH4 1651 aa12.67□□□□□ -0.38
SNF8-204ENST00000506104 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
SNF8-204ENST00000506104 JCADQ9P266 1359 aa12.66□□□□□ -0.38
SNF8-204ENST00000506104 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
SNF8-204ENST00000506104 ZNF326Q5BKZ1 582 aaKnown RBP12.65□□□□□ -0.38
SNF8-204ENST00000506104 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
SNF8-204ENST00000506104 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
SNF8-204ENST00000506104 UNC13BO14795 1591 aa12.64□□□□□ -0.39
SNF8-204ENST00000506104 TBX22Q9Y458 520 aa12.63□□□□□ -0.39
SNF8-204ENST00000506104 NUP155O75694 1391 aa12.62□□□□□ -0.39
SNF8-204ENST00000506104 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
SNF8-204ENST00000506104 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
SNF8-204ENST00000506104 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
SNF8-204ENST00000506104 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
SNF8-204ENST00000506104 TRPM2O94759 1503 aa12.6□□□□□ -0.39
SNF8-204ENST00000506104 IQGAP3Q86VI3 1631 aa12.59□□□□□ -0.39
SNF8-204ENST00000506104 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
SNF8-204ENST00000506104 DIP2AQ14689 1571 aa12.59□□□□□ -0.39
SNF8-204ENST00000506104 ADAMTS13Q76LX8 1427 aa12.58□□□□□ -0.4
SNF8-204ENST00000506104 LRP6O75581 1613 aa12.58□□□□□ -0.4
SNF8-204ENST00000506104 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SNF8-204ENST00000506104 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
SNF8-204ENST00000506104 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
SNF8-204ENST00000506104 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
SNF8-204ENST00000506104 RXRBP28702 533 aa12.55□□□□□ -0.4
SNF8-204ENST00000506104 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
SNF8-204ENST00000506104 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
SNF8-204ENST00000506104 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
SNF8-204ENST00000506104 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
SNF8-204ENST00000506104 KIF1BO60333 1816 aa12.54□□□□□ -0.4
SNF8-204ENST00000506104 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
SNF8-204ENST00000506104 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
SNF8-204ENST00000506104 AFF2P51816 1311 aa12.54□□□□□ -0.4
SNF8-204ENST00000506104 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
SNF8-204ENST00000506104 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
SNF8-204ENST00000506104 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
SNF8-204ENST00000506104 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNF8-204ENST00000506104 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
SNF8-204ENST00000506104 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
SNF8-204ENST00000506104 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
SNF8-204ENST00000506104 METP08581 1390 aa12.5□□□□□ -0.41
SNF8-204ENST00000506104 NALCNQ8IZF0 1738 aa12.49□□□□□ -0.41
SNF8-204ENST00000506104 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
SNF8-204ENST00000506104 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
SNF8-204ENST00000506104 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
SNF8-204ENST00000506104 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
SNF8-204ENST00000506104 MST1RQ04912 1400 aa12.48□□□□□ -0.41
SNF8-204ENST00000506104 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
SNF8-204ENST00000506104 DCCP43146 1447 aa12.46□□□□□ -0.41
SNF8-204ENST00000506104 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
SNF8-204ENST00000506104 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
SNF8-204ENST00000506104 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
SNF8-204ENST00000506104 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
SNF8-204ENST00000506104 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
SNF8-204ENST00000506104 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
SNF8-204ENST00000506104 ORAI2Q96SN7 254 aa12.43□□□□□ -0.42
SNF8-204ENST00000506104 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
SNF8-204ENST00000506104 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
SNF8-204ENST00000506104 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
SNF8-204ENST00000506104 USP21Q9UK80 565 aa12.42□□□□□ -0.42
SNF8-204ENST00000506104 RGS12O14924 1447 aa12.41□□□□□ -0.42
SNF8-204ENST00000506104 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
SNF8-204ENST00000506104 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
SNF8-204ENST00000506104 STK26Q9P289 416 aa12.41□□□□□ -0.42
SNF8-204ENST00000506104 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
SNF8-204ENST00000506104 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.43
SNF8-204ENST00000506104 PPLO60437 1756 aa12.39□□□□□ -0.43
SNF8-204ENST00000506104 FOXD1Q16676 465 aa12.39□□□□□ -0.43
SNF8-204ENST00000506104 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
SNF8-204ENST00000506104 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
SNF8-204ENST00000506104 NAIPQ13075 1403 aa12.37□□□□□ -0.43
SNF8-204ENST00000506104 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
SNF8-204ENST00000506104 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms