RNA–Protein interactions for RNA: ENST00000505552.1

ITGA3-205, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-205ENST00000505552 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
ITGA3-205ENST00000505552 KDM5AP29375 1690 aaKnown RBP8.12□□□□□ -1.11
ITGA3-205ENST00000505552 MLECQ14165 292 aa8.12□□□□□ -1.11
ITGA3-205ENST00000505552 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
ITGA3-205ENST00000505552 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
ITGA3-205ENST00000505552 ZFYVE9O95405 1425 aa8.12□□□□□ -1.11
ITGA3-205ENST00000505552 RGL3Q3MIN7 710 aa8.11□□□□□ -1.11
ITGA3-205ENST00000505552 SLC52A1Q9NWF4 448 aa8.11□□□□□ -1.11
ITGA3-205ENST00000505552 UBR1Q8IWV7 1749 aa8.11□□□□□ -1.11
ITGA3-205ENST00000505552 ADGRB1O14514 1584 aa8.1□□□□□ -1.11
ITGA3-205ENST00000505552 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
ITGA3-205ENST00000505552 IQGAP1P46940 1657 aa8.1□□□□□ -1.11
ITGA3-205ENST00000505552 PIK3C2GO75747 1445 aa8.1□□□□□ -1.11
ITGA3-205ENST00000505552 SETD1AO15047 1707 aaKnown RBP8.09□□□□□ -1.11
ITGA3-205ENST00000505552 ASXL1Q8IXJ9 1541 aa8.09□□□□□ -1.11
ITGA3-205ENST00000505552 RIMS1Q86UR5 1692 aaKnown RBP8.09□□□□□ -1.11
ITGA3-205ENST00000505552 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
ITGA3-205ENST00000505552 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
ITGA3-205ENST00000505552 NRXN3Q9Y4C0 1643 aa8.09□□□□□ -1.11
ITGA3-205ENST00000505552 RPGRIP1LQ68CZ1 1315 aa8.08□□□□□ -1.12
ITGA3-205ENST00000505552 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
ITGA3-205ENST00000505552 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
ITGA3-205ENST00000505552 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
ITGA3-205ENST00000505552 CEBPAP49715 358 aaPredicted RBP8.08□□□□□ -1.12
ITGA3-205ENST00000505552 KDM2AQ9Y2K7 1162 aa8.08□□□□□ -1.12
ITGA3-205ENST00000505552 SETBP1Q9Y6X0 1596 aa8.08□□□□□ -1.12
ITGA3-205ENST00000505552 TNRQ92752 1358 aa8.08□□□□□ -1.12
ITGA3-205ENST00000505552 MYO3AQ8NEV4 1616 aa8.07□□□□□ -1.12
ITGA3-205ENST00000505552 ARID4BQ4LE39 1312 aaPredicted RBP8.07□□□□□ -1.12
ITGA3-205ENST00000505552 POLR1AO95602 1720 aaPredicted RBP8.07□□□□□ -1.12
ITGA3-205ENST00000505552 FBXO41Q8TF61 875 aa8.07□□□□□ -1.12
ITGA3-205ENST00000505552 PTPRMP28827 1452 aa8.06□□□□□ -1.12
ITGA3-205ENST00000505552 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
ITGA3-205ENST00000505552 ARHGAP23Q9P227 1491 aa8.06□□□□□ -1.12
ITGA3-205ENST00000505552 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
ITGA3-205ENST00000505552 USP47Q96K76 1375 aa8.06□□□□□ -1.12
ITGA3-205ENST00000505552 ZNF142P52746 1687 aaPredicted RBP8.05□□□□□ -1.12
ITGA3-205ENST00000505552 SLIT1O75093 1534 aa8.05□□□□□ -1.12
ITGA3-205ENST00000505552 HOXD11P31277 338 aaPredicted RBP8.05□□□□□ -1.12
ITGA3-205ENST00000505552 C14orf93Q9H972 538 aaKnown RBP8.05□□□□□ -1.12
ITGA3-205ENST00000505552 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
ITGA3-205ENST00000505552 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
ITGA3-205ENST00000505552 TESK2Q96S53 571 aa8.04□□□□□ -1.12
ITGA3-205ENST00000505552 MED14O60244 1454 aa8.04□□□□□ -1.12
ITGA3-205ENST00000505552 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
ITGA3-205ENST00000505552 RIMS2Q9UQ26 1411 aa8.03□□□□□ -1.12
ITGA3-205ENST00000505552 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
ITGA3-205ENST00000505552 TMEM2Q9UHN6 1383 aa8.03□□□□□ -1.12
ITGA3-205ENST00000505552 ZNF326Q5BKZ1 582 aaKnown RBP8.03□□□□□ -1.12
ITGA3-205ENST00000505552 ALKQ9UM73 1620 aa8.03□□□□□ -1.12
ITGA3-205ENST00000505552 CEP170BQ9Y4F5 1589 aaPredicted RBP8.02□□□□□ -1.13
ITGA3-205ENST00000505552 SCAF11Q99590 1463 aaKnown RBP8.02□□□□□ -1.13
ITGA3-205ENST00000505552 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
ITGA3-205ENST00000505552 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
ITGA3-205ENST00000505552 ARHGEF28Q8N1W1 1705 aaKnown RBP8.02□□□□□ -1.13
ITGA3-205ENST00000505552 ADAMTS13Q76LX8 1427 aa8.02□□□□□ -1.13
ITGA3-205ENST00000505552 CCDC7Q96M83 1385 aa8.01□□□□□ -1.13
ITGA3-205ENST00000505552 ST20-MTHFSA0A0A6YYL1 179 aa8.01□□□□□ -1.13
ITGA3-205ENST00000505552 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
ITGA3-205ENST00000505552 NUTM2DQ5VT03 806 aaPredicted RBP8.01□□□□□ -1.13
ITGA3-205ENST00000505552 KIF7Q2M1P5 1343 aa8.01□□□□□ -1.13
ITGA3-205ENST00000505552 SETD1BQ9UPS6 1966 aaKnown RBP8.01□□□□□ -1.13
ITGA3-205ENST00000505552 VGFO15240 615 aaPredicted RBP8□□□□□ -1.13
ITGA3-205ENST00000505552 LTKP29376 864 aa8□□□□□ -1.13
ITGA3-205ENST00000505552 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
ITGA3-205ENST00000505552 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
ITGA3-205ENST00000505552 DISP3Q9P2K9 1392 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 SBNO2Q9Y2G9 1366 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 KNDC1Q76NI1 1749 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 CNKSR2Q8WXI2 1034 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 MYOM1P52179 1685 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 DLC1Q96QB1 1528 aa7.98□□□□□ -1.13
ITGA3-205ENST00000505552 METP08581 1390 aa7.97□□□□□ -1.13
ITGA3-205ENST00000505552 PLEKHG1Q9ULL1 1385 aa7.97□□□□□ -1.13
ITGA3-205ENST00000505552 TECPR2O15040 1411 aa7.97□□□□□ -1.13
ITGA3-205ENST00000505552 TMEM132EQ6IEE7 984 aa7.97□□□□□ -1.13
ITGA3-205ENST00000505552 PTPRUQ92729 1446 aa7.96□□□□□ -1.13
ITGA3-205ENST00000505552 YTHDC2Q9H6S0 1430 aaKnown RBP7.96□□□□□ -1.13
ITGA3-205ENST00000505552 QRICH2Q9H0J4 1663 aa7.96□□□□□ -1.13
ITGA3-205ENST00000505552 TULP4Q9NRJ4 1543 aa7.96□□□□□ -1.14
ITGA3-205ENST00000505552 LRPPRCP42704 1394 aaKnown RBP7.96□□□□□ -1.14
ITGA3-205ENST00000505552 XRN1Q8IZH2 1706 aaKnown RBP7.95□□□□□ -1.14
ITGA3-205ENST00000505552 CPS1P31327 1500 aa7.95□□□□□ -1.14
ITGA3-205ENST00000505552 DDX10Q13206 875 aaKnown RBP7.95□□□□□ -1.14
ITGA3-205ENST00000505552 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.95□□□□□ -1.14
ITGA3-205ENST00000505552 ABCC11Q96J66 1382 aa7.95□□□□□ -1.14
ITGA3-205ENST00000505552 DIP2AQ14689 1571 aa7.94□□□□□ -1.14
ITGA3-205ENST00000505552 MIER1Q8N108 512 aa7.94□□□□□ -1.14
ITGA3-205ENST00000505552 THEMISQ8N1K5 641 aaPredicted RBP7.93□□□□□ -1.14
ITGA3-205ENST00000505552 PLEKHH1Q9ULM0 1364 aa7.93□□□□□ -1.14
ITGA3-205ENST00000505552 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.92□□□□□ -1.14
ITGA3-205ENST00000505552 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
ITGA3-205ENST00000505552 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
ITGA3-205ENST00000505552 SIRT1Q96EB6 747 aa7.92□□□□□ -1.14
ITGA3-205ENST00000505552 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
ITGA3-205ENST00000505552 STAG3Q9UJ98 1225 aa7.92□□□□□ -1.14
ITGA3-205ENST00000505552 TRAK1Q9UPV9 953 aa7.92□□□□□ -1.14
ITGA3-205ENST00000505552 CENPJQ9HC77 1338 aaPredicted RBP7.92□□□□□ -1.14
ITGA3-205ENST00000505552 CHD2O14647 1828 aaKnown RBP7.92□□□□□ -1.14
ITGA3-205ENST00000505552 TBX22Q9Y458 520 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms