RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
LETM1-203ENST00000505551 CROCC2H7BZ55 1655 aa17.17■□□□□ 0.34
LETM1-203ENST00000505551 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
LETM1-203ENST00000505551 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
LETM1-203ENST00000505551 PLIN1O60240 522 aa17.15■□□□□ 0.34
LETM1-203ENST00000505551 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
LETM1-203ENST00000505551 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.34
LETM1-203ENST00000505551 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
LETM1-203ENST00000505551 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
LETM1-203ENST00000505551 KDM5CP41229 1560 aa17.14■□□□□ 0.33
LETM1-203ENST00000505551 USP47Q96K76 1375 aa17.13■□□□□ 0.33
LETM1-203ENST00000505551 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
LETM1-203ENST00000505551 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
LETM1-203ENST00000505551 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
LETM1-203ENST00000505551 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
LETM1-203ENST00000505551 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
LETM1-203ENST00000505551 RALBP1Q15311 655 aa17.11■□□□□ 0.33
LETM1-203ENST00000505551 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
LETM1-203ENST00000505551 PLCH2O75038 1416 aa17.11■□□□□ 0.33
LETM1-203ENST00000505551 E9PCH4 1651 aa17.1■□□□□ 0.33
LETM1-203ENST00000505551 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
LETM1-203ENST00000505551 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
LETM1-203ENST00000505551 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
LETM1-203ENST00000505551 USP19O94966 1318 aa17.09■□□□□ 0.33
LETM1-203ENST00000505551 ZMYM4Q5VZL5 1548 aa17.08■□□□□ 0.32
LETM1-203ENST00000505551 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
LETM1-203ENST00000505551 INSRP06213 1382 aa17.08■□□□□ 0.32
LETM1-203ENST00000505551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
LETM1-203ENST00000505551 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
LETM1-203ENST00000505551 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
LETM1-203ENST00000505551 TPRNQ4KMQ1 711 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
LETM1-203ENST00000505551 TPM2P07951 284 aa17.05■□□□□ 0.32
LETM1-203ENST00000505551 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
LETM1-203ENST00000505551 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
LETM1-203ENST00000505551 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
LETM1-203ENST00000505551 BECN1Q14457 450 aa17.04■□□□□ 0.32
LETM1-203ENST00000505551 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
LETM1-203ENST00000505551 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
LETM1-203ENST00000505551 PRDM4Q9UKN5 801 aa17.03■□□□□ 0.32
LETM1-203ENST00000505551 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
LETM1-203ENST00000505551 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
LETM1-203ENST00000505551 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
LETM1-203ENST00000505551 ZFP91Q96JP5 570 aaPredicted RBP17.02■□□□□ 0.31
LETM1-203ENST00000505551 ESPNB1AK53 854 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 KIF3BO15066 747 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 CCDC144AA2RUR9 1427 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
LETM1-203ENST00000505551 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
LETM1-203ENST00000505551 WDR7Q9Y4E6 1490 aa17■□□□□ 0.31
LETM1-203ENST00000505551 RGS3P49796 1198 aa16.99■□□□□ 0.31
LETM1-203ENST00000505551 MRE11P49959 708 aa16.99■□□□□ 0.31
LETM1-203ENST00000505551 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
LETM1-203ENST00000505551 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
LETM1-203ENST00000505551 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
LETM1-203ENST00000505551 FANCAO15360 1455 aa16.97■□□□□ 0.31
LETM1-203ENST00000505551 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
LETM1-203ENST00000505551 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
LETM1-203ENST00000505551 MCM4P33991 863 aa16.95■□□□□ 0.3
LETM1-203ENST00000505551 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
LETM1-203ENST00000505551 ABCC1P33527 1531 aa16.94■□□□□ 0.3
LETM1-203ENST00000505551 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
LETM1-203ENST00000505551 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
LETM1-203ENST00000505551 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
LETM1-203ENST00000505551 GTF2E1P29083 439 aaPredicted RBP16.93■□□□□ 0.3
LETM1-203ENST00000505551 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
LETM1-203ENST00000505551 CDK11BP21127 795 aaKnown RBP16.92■□□□□ 0.3
LETM1-203ENST00000505551 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
LETM1-203ENST00000505551 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
LETM1-203ENST00000505551 SEC24BO95487 1268 aa16.91■□□□□ 0.3
LETM1-203ENST00000505551 GRPEL1Q9HAV7 217 aa16.91■□□□□ 0.3
LETM1-203ENST00000505551 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
LETM1-203ENST00000505551 KCNA4P22459 653 aa16.91■□□□□ 0.3
LETM1-203ENST00000505551 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
LETM1-203ENST00000505551 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
LETM1-203ENST00000505551 GGT6Q6P531 493 aa16.9■□□□□ 0.3
LETM1-203ENST00000505551 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
LETM1-203ENST00000505551 TRAK2O60296 914 aa16.89■□□□□ 0.29
LETM1-203ENST00000505551 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
LETM1-203ENST00000505551 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
LETM1-203ENST00000505551 TBC1D2Q9BYX2 928 aa16.88■□□□□ 0.29
LETM1-203ENST00000505551 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
LETM1-203ENST00000505551 ERBINQ96RT1 1412 aa16.88■□□□□ 0.29
LETM1-203ENST00000505551 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
LETM1-203ENST00000505551 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
LETM1-203ENST00000505551 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
LETM1-203ENST00000505551 PLXNC1O60486 1568 aa16.86■□□□□ 0.29
LETM1-203ENST00000505551 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
LETM1-203ENST00000505551 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
LETM1-203ENST00000505551 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
LETM1-203ENST00000505551 A2MP01023 1474 aa16.85■□□□□ 0.29
LETM1-203ENST00000505551 CD109Q6YHK3 1445 aa16.85■□□□□ 0.29
LETM1-203ENST00000505551 TERF1P54274 439 aa16.85■□□□□ 0.29
LETM1-203ENST00000505551 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms