RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 SLC52A1Q9NWF4 448 aa23.96■■□□□ 1.43
PDCD6-203ENST00000505526 NWD1Q149M9 1564 aa23.96■■□□□ 1.43
PDCD6-203ENST00000505526 MSH6P52701 1360 aa23.94■■□□□ 1.42
PDCD6-203ENST00000505526 SLAIN2Q9P270 581 aa23.92■■□□□ 1.42
PDCD6-203ENST00000505526 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
PDCD6-203ENST00000505526 RPRD2Q5VT52 1461 aaKnown RBP23.88■■□□□ 1.41
PDCD6-203ENST00000505526 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
PDCD6-203ENST00000505526 PHLPP1O60346 1717 aa23.88■■□□□ 1.41
PDCD6-203ENST00000505526 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
PDCD6-203ENST00000505526 JCADQ9P266 1359 aa23.86■■□□□ 1.41
PDCD6-203ENST00000505526 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
PDCD6-203ENST00000505526 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
PDCD6-203ENST00000505526 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
PDCD6-203ENST00000505526 CHD2O14647 1828 aaKnown RBP23.84■■□□□ 1.41
PDCD6-203ENST00000505526 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
PDCD6-203ENST00000505526 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
PDCD6-203ENST00000505526 GCC2Q8IWJ2 1684 aa23.82■■□□□ 1.4
PDCD6-203ENST00000505526 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
PDCD6-203ENST00000505526 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
PDCD6-203ENST00000505526 TMEM131LA2VDJ0 1609 aa23.81■■□□□ 1.4
PDCD6-203ENST00000505526 TBX22Q9Y458 520 aa23.81■■□□□ 1.4
PDCD6-203ENST00000505526 NCOA3Q9Y6Q9 1424 aa23.79■■□□□ 1.4
PDCD6-203ENST00000505526 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
PDCD6-203ENST00000505526 COL16A1Q07092 1604 aaPredicted RBP23.79■■□□□ 1.4
PDCD6-203ENST00000505526 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
PDCD6-203ENST00000505526 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
PDCD6-203ENST00000505526 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDCD6-203ENST00000505526 SPATA31A6Q5VVP1 1343 aa23.75■■□□□ 1.39
PDCD6-203ENST00000505526 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
PDCD6-203ENST00000505526 ADAMTS13Q76LX8 1427 aa23.74■■□□□ 1.39
PDCD6-203ENST00000505526 LRP6O75581 1613 aa23.73■■□□□ 1.39
PDCD6-203ENST00000505526 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
PDCD6-203ENST00000505526 MEX3CQ5U5Q3 659 aaKnown RBP23.72■■□□□ 1.39
PDCD6-203ENST00000505526 C19orf44Q9H6X5 657 aa23.72■■□□□ 1.39
PDCD6-203ENST00000505526 ATF3P18847 181 aa23.71■■□□□ 1.39
PDCD6-203ENST00000505526 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.71■■□□□ 1.39
PDCD6-203ENST00000505526 UNC13BO14795 1591 aa23.71■■□□□ 1.39
PDCD6-203ENST00000505526 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
PDCD6-203ENST00000505526 PIK3R4Q99570 1358 aa23.7■■□□□ 1.38
PDCD6-203ENST00000505526 AHDC1Q5TGY3 1603 aaPredicted RBP23.7■■□□□ 1.38
PDCD6-203ENST00000505526 TRIM26Q12899 539 aaPredicted RBP23.69■■□□□ 1.38
PDCD6-203ENST00000505526 ZNF772Q68DY9 489 aaPredicted RBP23.69■■□□□ 1.38
PDCD6-203ENST00000505526 E9PCH4 1651 aa23.69■■□□□ 1.38
PDCD6-203ENST00000505526 SHPRHQ149N8 1683 aa23.66■■□□□ 1.38
PDCD6-203ENST00000505526 AMOTL2Q9Y2J4 779 aa23.66■■□□□ 1.38
PDCD6-203ENST00000505526 TRPM2O94759 1503 aa23.65■■□□□ 1.38
PDCD6-203ENST00000505526 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
PDCD6-203ENST00000505526 ITGAEP38570 1179 aa23.63■■□□□ 1.37
PDCD6-203ENST00000505526 BRINP3Q76B58 766 aa23.63■■□□□ 1.37
PDCD6-203ENST00000505526 UPF1Q92900 1129 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDCD6-203ENST00000505526 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
PDCD6-203ENST00000505526 PTPRUQ92729 1446 aa23.62■■□□□ 1.37
PDCD6-203ENST00000505526 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
PDCD6-203ENST00000505526 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
PDCD6-203ENST00000505526 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
PDCD6-203ENST00000505526 RXRBP28702 533 aa23.59■■□□□ 1.37
PDCD6-203ENST00000505526 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
PDCD6-203ENST00000505526 NUP155O75694 1391 aa23.58■■□□□ 1.37
PDCD6-203ENST00000505526 DCCP43146 1447 aa23.57■■□□□ 1.36
PDCD6-203ENST00000505526 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
PDCD6-203ENST00000505526 XRN1Q8IZH2 1706 aaKnown RBP23.54■■□□□ 1.36
PDCD6-203ENST00000505526 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
PDCD6-203ENST00000505526 MST1RQ04912 1400 aa23.53■■□□□ 1.36
PDCD6-203ENST00000505526 SETD5Q9C0A6 1442 aa23.53■■□□□ 1.36
PDCD6-203ENST00000505526 AFF2P51816 1311 aa23.52■■□□□ 1.36
PDCD6-203ENST00000505526 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
PDCD6-203ENST00000505526 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
PDCD6-203ENST00000505526 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
PDCD6-203ENST00000505526 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
PDCD6-203ENST00000505526 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
PDCD6-203ENST00000505526 NHSL1Q5SYE7 1610 aa23.49■■□□□ 1.35
PDCD6-203ENST00000505526 METP08581 1390 aa23.49■■□□□ 1.35
PDCD6-203ENST00000505526 SPHKAPQ2M3C7 1700 aa23.45■■□□□ 1.35
PDCD6-203ENST00000505526 DDX17Q92841 729 aaKnown RBP23.45■■□□□ 1.34
PDCD6-203ENST00000505526 C8orf37Q96NL8 207 aa23.45■■□□□ 1.34
PDCD6-203ENST00000505526 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
PDCD6-203ENST00000505526 PNPLA6Q8IY17 1366 aa23.43■■□□□ 1.34
PDCD6-203ENST00000505526 QTRT2Q9H974 415 aaKnown RBP23.43■■□□□ 1.34
PDCD6-203ENST00000505526 RBM6P78332 1123 aaKnown RBP23.41■■□□□ 1.34
PDCD6-203ENST00000505526 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
PDCD6-203ENST00000505526 RGS12O14924 1447 aa23.4■■□□□ 1.34
PDCD6-203ENST00000505526 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.33
PDCD6-203ENST00000505526 CLTCL1P53675 1640 aa23.36■■□□□ 1.33
PDCD6-203ENST00000505526 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
PDCD6-203ENST00000505526 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
PDCD6-203ENST00000505526 ADAMTS2O95450 1211 aa23.36■■□□□ 1.33
PDCD6-203ENST00000505526 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
PDCD6-203ENST00000505526 NAIPQ13075 1403 aa23.33■■□□□ 1.33
PDCD6-203ENST00000505526 LAMC1P11047 1609 aa23.31■■□□□ 1.32
PDCD6-203ENST00000505526 ORAI2Q96SN7 254 aa23.3■■□□□ 1.32
PDCD6-203ENST00000505526 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
PDCD6-203ENST00000505526 SOS2Q07890 1332 aaPredicted RBP23.3■■□□□ 1.32
PDCD6-203ENST00000505526 KIF1BO60333 1816 aa23.29■■□□□ 1.32
PDCD6-203ENST00000505526 ROBO2Q9HCK4 1378 aa23.28■■□□□ 1.32
PDCD6-203ENST00000505526 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
PDCD6-203ENST00000505526 USP21Q9UK80 565 aa23.28■■□□□ 1.32
PDCD6-203ENST00000505526 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
PDCD6-203ENST00000505526 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
PDCD6-203ENST00000505526 RAB3GAP2Q9H2M9 1393 aa23.24■■□□□ 1.31
PDCD6-203ENST00000505526 FNBP4Q8N3X1 1017 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms