RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 BRD4O60885 1362 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-205ENST00000505458 MROH2AA6NES4 1674 aa15.45■□□□□ 0.06
NFKB1-205ENST00000505458 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
NFKB1-205ENST00000505458 NEFLP07196 543 aa15.44■□□□□ 0.06
NFKB1-205ENST00000505458 SYNMO15061 1565 aa15.44■□□□□ 0.06
NFKB1-205ENST00000505458 TESK2Q96S53 571 aa15.44■□□□□ 0.06
NFKB1-205ENST00000505458 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
NFKB1-205ENST00000505458 SBNO2Q9Y2G9 1366 aa15.43■□□□□ 0.06
NFKB1-205ENST00000505458 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
NFKB1-205ENST00000505458 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
NFKB1-205ENST00000505458 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
NFKB1-205ENST00000505458 INSRP06213 1382 aa15.42■□□□□ 0.06
NFKB1-205ENST00000505458 KDM5AP29375 1690 aaKnown RBP15.41■□□□□ 0.06
NFKB1-205ENST00000505458 GGT6Q6P531 493 aa15.4■□□□□ 0.06
NFKB1-205ENST00000505458 UGGT1Q9NYU2 1555 aa15.4■□□□□ 0.06
NFKB1-205ENST00000505458 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
NFKB1-205ENST00000505458 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
NFKB1-205ENST00000505458 PARD3Q8TEW0 1356 aa15.39■□□□□ 0.05
NFKB1-205ENST00000505458 SLC52A1Q9NWF4 448 aa15.39■□□□□ 0.05
NFKB1-205ENST00000505458 DISP3Q9P2K9 1392 aa15.39■□□□□ 0.05
NFKB1-205ENST00000505458 ZFYVE9O95405 1425 aa15.39■□□□□ 0.05
NFKB1-205ENST00000505458 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
NFKB1-205ENST00000505458 PREX1Q8TCU6 1659 aa15.37■□□□□ 0.05
NFKB1-205ENST00000505458 YEATS2Q9ULM3 1422 aa15.37■□□□□ 0.05
NFKB1-205ENST00000505458 SUPT16HQ9Y5B9 1047 aaKnown RBP15.37■□□□□ 0.05
NFKB1-205ENST00000505458 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
NFKB1-205ENST00000505458 SIGLEC1Q9BZZ2 1709 aa15.36■□□□□ 0.05
NFKB1-205ENST00000505458 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
NFKB1-205ENST00000505458 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
NFKB1-205ENST00000505458 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
NFKB1-205ENST00000505458 ERICH6BQ5W0A0 696 aa15.35■□□□□ 0.05
NFKB1-205ENST00000505458 KIF13AQ9H1H9 1805 aa15.34■□□□□ 0.05
NFKB1-205ENST00000505458 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
NFKB1-205ENST00000505458 VGFO15240 615 aaPredicted RBP15.33■□□□□ 0.05
NFKB1-205ENST00000505458 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
NFKB1-205ENST00000505458 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
NFKB1-205ENST00000505458 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
NFKB1-205ENST00000505458 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
NFKB1-205ENST00000505458 C14orf93Q9H972 538 aaKnown RBP15.31■□□□□ 0.04
NFKB1-205ENST00000505458 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
NFKB1-205ENST00000505458 PUS7Q96PZ0 661 aaKnown RBP15.31■□□□□ 0.04
NFKB1-205ENST00000505458 MYOM1P52179 1685 aa15.31■□□□□ 0.04
NFKB1-205ENST00000505458 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
NFKB1-205ENST00000505458 ADGRB1O14514 1584 aa15.3■□□□□ 0.04
NFKB1-205ENST00000505458 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
NFKB1-205ENST00000505458 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
NFKB1-205ENST00000505458 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
NFKB1-205ENST00000505458 ERVK-7P63135 1459 aa15.29■□□□□ 0.04
NFKB1-205ENST00000505458 TMEM131LA2VDJ0 1609 aa15.29■□□□□ 0.04
NFKB1-205ENST00000505458 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
NFKB1-205ENST00000505458 PANK3Q9H999 370 aa15.28■□□□□ 0.04
NFKB1-205ENST00000505458 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
NFKB1-205ENST00000505458 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
NFKB1-205ENST00000505458 CENPJQ9HC77 1338 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-205ENST00000505458 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
NFKB1-205ENST00000505458 SPATA31D1Q6ZQQ2 1576 aa15.27■□□□□ 0.04
NFKB1-205ENST00000505458 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.03
NFKB1-205ENST00000505458 CLTCQ00610 1675 aaKnown RBP15.24■□□□□ 0.03
NFKB1-205ENST00000505458 ARHGEF28Q8N1W1 1705 aaKnown RBP15.24■□□□□ 0.03
NFKB1-205ENST00000505458 FKBP8Q14318 412 aa15.24■□□□□ 0.03
NFKB1-205ENST00000505458 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
NFKB1-205ENST00000505458 NINLQ9Y2I6 1382 aa15.23■□□□□ 0.03
NFKB1-205ENST00000505458 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
NFKB1-205ENST00000505458 IDI1Q13907 227 aa15.21■□□□□ 0.03
NFKB1-205ENST00000505458 MYO5BQ9ULV0 1848 aa15.2■□□□□ 0.02
NFKB1-205ENST00000505458 BLMP54132 1417 aaPredicted RBP15.2■□□□□ 0.02
NFKB1-205ENST00000505458 NUDCQ9Y266 331 aa15.19■□□□□ 0.02
NFKB1-205ENST00000505458 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
NFKB1-205ENST00000505458 EVC2Q86UK5 1308 aa15.18■□□□□ 0.02
NFKB1-205ENST00000505458 NSD2O96028 1365 aa15.16■□□□□ 0.02
NFKB1-205ENST00000505458 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
NFKB1-205ENST00000505458 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
NFKB1-205ENST00000505458 ESF1Q9H501 851 aaKnown RBP15.16■□□□□ 0.02
NFKB1-205ENST00000505458 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
NFKB1-205ENST00000505458 HDGFP51858 240 aaKnown RBP15.15■□□□□ 0.02
NFKB1-205ENST00000505458 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
NFKB1-205ENST00000505458 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
NFKB1-205ENST00000505458 A2ML1A8K2U0 1454 aa15.14■□□□□ 0.01
NFKB1-205ENST00000505458 PPP2R1AP30153 589 aa15.13■□□□□ 0.01
NFKB1-205ENST00000505458 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
NFKB1-205ENST00000505458 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
NFKB1-205ENST00000505458 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
NFKB1-205ENST00000505458 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
NFKB1-205ENST00000505458 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
NFKB1-205ENST00000505458 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
NFKB1-205ENST00000505458 TULP4Q9NRJ4 1543 aa15.11■□□□□ 0.01
NFKB1-205ENST00000505458 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
NFKB1-205ENST00000505458 RIMS2Q9UQ26 1411 aa15.1■□□□□ 0.01
NFKB1-205ENST00000505458 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
NFKB1-205ENST00000505458 PTPRMP28827 1452 aa15.1■□□□□ 0.01
NFKB1-205ENST00000505458 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
NFKB1-205ENST00000505458 PPP4R2Q9NY27 417 aa15.09■□□□□ 0.01
NFKB1-205ENST00000505458 KNDC1Q76NI1 1749 aa15.08■□□□□ 0
NFKB1-205ENST00000505458 POLR3AO14802 1390 aaPredicted RBP15.08■□□□□ 0
NFKB1-205ENST00000505458 ZMYM3Q14202 1370 aa15.08■□□□□ 0
NFKB1-205ENST00000505458 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
NFKB1-205ENST00000505458 SETD1AO15047 1707 aaKnown RBP15.07■□□□□ 0
NFKB1-205ENST00000505458 NLRP1Q9C000 1473 aa15.07■□□□□ 0
NFKB1-205ENST00000505458 TNRQ92752 1358 aa15.07■□□□□ 0
NFKB1-205ENST00000505458 FBXO31Q5XUX0 539 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms