RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
LIN54-204ENST00000505397 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 GPRASP1Q5JY77 1395 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 STAC3Q96MF2 364 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
LIN54-204ENST00000505397 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 NPATQ14207 1427 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.26
LIN54-204ENST00000505397 B4GALNT3Q6L9W6 998 aa22.88■■□□□ 1.25
LIN54-204ENST00000505397 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
LIN54-204ENST00000505397 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
LIN54-204ENST00000505397 RALBP1Q15311 655 aa22.85■■□□□ 1.25
LIN54-204ENST00000505397 TMC1Q8TDI8 760 aa22.84■■□□□ 1.25
LIN54-204ENST00000505397 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
LIN54-204ENST00000505397 MROH2AA6NES4 1674 aa22.83■■□□□ 1.25
LIN54-204ENST00000505397 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
LIN54-204ENST00000505397 REREQ9P2R6 1566 aa22.81■■□□□ 1.24
LIN54-204ENST00000505397 IFT172Q9UG01 1749 aa22.8■■□□□ 1.24
LIN54-204ENST00000505397 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
LIN54-204ENST00000505397 MYOM2P54296 1465 aa22.79■■□□□ 1.24
LIN54-204ENST00000505397 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 ARHGAP31Q2M1Z3 1444 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
LIN54-204ENST00000505397 PARD3Q8TEW0 1356 aa22.77■■□□□ 1.24
LIN54-204ENST00000505397 NOS1P29475 1434 aa22.76■■□□□ 1.23
LIN54-204ENST00000505397 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
LIN54-204ENST00000505397 AGLP35573 1532 aa22.74■■□□□ 1.23
LIN54-204ENST00000505397 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
LIN54-204ENST00000505397 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
LIN54-204ENST00000505397 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
LIN54-204ENST00000505397 SYNMO15061 1565 aa22.73■■□□□ 1.23
LIN54-204ENST00000505397 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
LIN54-204ENST00000505397 PPLO60437 1756 aa22.72■■□□□ 1.23
LIN54-204ENST00000505397 PREX1Q8TCU6 1659 aa22.7■■□□□ 1.23
LIN54-204ENST00000505397 NLRP13Q86W25 1043 aa22.7■■□□□ 1.22
LIN54-204ENST00000505397 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
LIN54-204ENST00000505397 TESK2Q96S53 571 aa22.69■■□□□ 1.22
LIN54-204ENST00000505397 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
LIN54-204ENST00000505397 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
LIN54-204ENST00000505397 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
LIN54-204ENST00000505397 TMF1P82094 1093 aa22.67■■□□□ 1.22
LIN54-204ENST00000505397 INSRP06213 1382 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 CCDC136Q96JN2 1154 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 DISP3Q9P2K9 1392 aa22.65■■□□□ 1.22
LIN54-204ENST00000505397 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.22
LIN54-204ENST00000505397 SLC52A1Q9NWF4 448 aa22.64■■□□□ 1.22
LIN54-204ENST00000505397 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
LIN54-204ENST00000505397 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
LIN54-204ENST00000505397 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
LIN54-204ENST00000505397 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
LIN54-204ENST00000505397 RRP1P56182 461 aaKnown RBP22.59■■□□□ 1.21
LIN54-204ENST00000505397 IDI1Q13907 227 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 MLECQ14165 292 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 MYO5BQ9ULV0 1848 aa22.58■■□□□ 1.21
LIN54-204ENST00000505397 NEXMIFQ5QGS0 1516 aa22.58■■□□□ 1.21
LIN54-204ENST00000505397 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.2
LIN54-204ENST00000505397 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.2
LIN54-204ENST00000505397 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
LIN54-204ENST00000505397 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
LIN54-204ENST00000505397 ESF1Q9H501 851 aaKnown RBP22.55■■□□□ 1.2
LIN54-204ENST00000505397 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 TMEM131LA2VDJ0 1609 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 PANK3Q9H999 370 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 FBXO31Q5XUX0 539 aaPredicted RBP22.54■■□□□ 1.2
LIN54-204ENST00000505397 SLC24A1O60721 1099 aa22.53■■□□□ 1.2
LIN54-204ENST00000505397 C14orf93Q9H972 538 aaKnown RBP22.53■■□□□ 1.2
LIN54-204ENST00000505397 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.2
LIN54-204ENST00000505397 SPATA31D1Q6ZQQ2 1576 aa22.51■■□□□ 1.19
LIN54-204ENST00000505397 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
LIN54-204ENST00000505397 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
LIN54-204ENST00000505397 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
LIN54-204ENST00000505397 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
LIN54-204ENST00000505397 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
LIN54-204ENST00000505397 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
LIN54-204ENST00000505397 EXOC6Q8TAG9 804 aa22.48■■□□□ 1.19
LIN54-204ENST00000505397 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
LIN54-204ENST00000505397 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.19
LIN54-204ENST00000505397 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.19
LIN54-204ENST00000505397 CENPJQ9HC77 1338 aaPredicted RBP22.45■■□□□ 1.18
LIN54-204ENST00000505397 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
LIN54-204ENST00000505397 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 QRICH2Q9H0J4 1663 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 TMEM132EQ6IEE7 984 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 MYOM1P52179 1685 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 ZMYM3Q14202 1370 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 ARHGEF28Q8N1W1 1705 aaKnown RBP22.4■■□□□ 1.18
LIN54-204ENST00000505397 IPO9Q96P70 1041 aaKnown RBP22.39■■□□□ 1.18
LIN54-204ENST00000505397 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 A2ML1A8K2U0 1454 aa22.38■■□□□ 1.17
LIN54-204ENST00000505397 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
LIN54-204ENST00000505397 KNSTRNQ9Y448 316 aa22.37■■□□□ 1.17
LIN54-204ENST00000505397 PPP2R1AP30153 589 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms