RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 ARHGAP23Q9P227 1491 aa9.81□□□□□ -0.84
SDHC-207ENST00000504963 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
SDHC-207ENST00000504963 SLC52A1Q9NWF4 448 aa9.81□□□□□ -0.84
SDHC-207ENST00000504963 NRXN3Q9Y4C0 1643 aa9.79□□□□□ -0.84
SDHC-207ENST00000504963 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
SDHC-207ENST00000504963 NRXN1Q9ULB1 1477 aa9.79□□□□□ -0.84
SDHC-207ENST00000504963 SLIT1O75093 1534 aa9.78□□□□□ -0.84
SDHC-207ENST00000504963 HSPA2P54652 639 aa9.78□□□□□ -0.84
SDHC-207ENST00000504963 NBPF8Q3BBV2 869 aa9.78□□□□□ -0.84
SDHC-207ENST00000504963 DISP3Q9P2K9 1392 aa9.77□□□□□ -0.84
SDHC-207ENST00000504963 RGL3Q3MIN7 710 aa9.77□□□□□ -0.85
SDHC-207ENST00000504963 STRCQ7RTU9 1775 aa9.77□□□□□ -0.85
SDHC-207ENST00000504963 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 RIMS2Q9UQ26 1411 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 PPP1R15AO75807 674 aaPredicted RBP9.76□□□□□ -0.85
SDHC-207ENST00000504963 LTKP29376 864 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 MYOM2P54296 1465 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 ADGRF5Q8IZF2 1346 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 ASXL1Q8IXJ9 1541 aa9.76□□□□□ -0.85
SDHC-207ENST00000504963 TMEM2Q9UHN6 1383 aa9.75□□□□□ -0.85
SDHC-207ENST00000504963 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
SDHC-207ENST00000504963 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
SDHC-207ENST00000504963 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
SDHC-207ENST00000504963 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
SDHC-207ENST00000504963 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
SDHC-207ENST00000504963 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
SDHC-207ENST00000504963 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
SDHC-207ENST00000504963 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
SDHC-207ENST00000504963 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
SDHC-207ENST00000504963 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
SDHC-207ENST00000504963 MED14O60244 1454 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 SETBP1Q9Y6X0 1596 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 CERKQ8TCT0 537 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 TIMELESSQ9UNS1 1208 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 KDM2AQ9Y2K7 1162 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 KIAA1210Q9ULL0 1709 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 RPGRIP1LQ68CZ1 1315 aa9.72□□□□□ -0.85
SDHC-207ENST00000504963 ADGRB1O14514 1584 aa9.71□□□□□ -0.85
SDHC-207ENST00000504963 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.86
SDHC-207ENST00000504963 ALKQ9UM73 1620 aa9.71□□□□□ -0.86
SDHC-207ENST00000504963 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
SDHC-207ENST00000504963 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
SDHC-207ENST00000504963 RALGAPBQ86X10 1494 aa9.7□□□□□ -0.86
SDHC-207ENST00000504963 THEMISQ8N1K5 641 aaPredicted RBP9.69□□□□□ -0.86
SDHC-207ENST00000504963 STRCP1A6NGW2 1772 aa9.68□□□□□ -0.86
SDHC-207ENST00000504963 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
SDHC-207ENST00000504963 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
SDHC-207ENST00000504963 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
SDHC-207ENST00000504963 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
SDHC-207ENST00000504963 PTPRUQ92729 1446 aa9.67□□□□□ -0.86
SDHC-207ENST00000504963 CACNB1Q02641 598 aaPredicted RBP9.67□□□□□ -0.86
SDHC-207ENST00000504963 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
SDHC-207ENST00000504963 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
SDHC-207ENST00000504963 LAMC1P11047 1609 aa9.67□□□□□ -0.86
SDHC-207ENST00000504963 METP08581 1390 aa9.66□□□□□ -0.86
SDHC-207ENST00000504963 CHD2O14647 1828 aaKnown RBP9.66□□□□□ -0.86
SDHC-207ENST00000504963 C14orf93Q9H972 538 aaKnown RBP9.66□□□□□ -0.86
SDHC-207ENST00000504963 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.86
SDHC-207ENST00000504963 ARHGEF28Q8N1W1 1705 aaKnown RBP9.65□□□□□ -0.86
SDHC-207ENST00000504963 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
SDHC-207ENST00000504963 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.87
SDHC-207ENST00000504963 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
SDHC-207ENST00000504963 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
SDHC-207ENST00000504963 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
SDHC-207ENST00000504963 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
SDHC-207ENST00000504963 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
SDHC-207ENST00000504963 ZEB1P37275 1124 aaPredicted RBP9.63□□□□□ -0.87
SDHC-207ENST00000504963 ANKLE2Q86XL3 938 aa9.63□□□□□ -0.87
SDHC-207ENST00000504963 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
SDHC-207ENST00000504963 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
SDHC-207ENST00000504963 XIRP1Q702N8 1843 aaKnown RBP9.61□□□□□ -0.87
SDHC-207ENST00000504963 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
SDHC-207ENST00000504963 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
SDHC-207ENST00000504963 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
SDHC-207ENST00000504963 TECPR2O15040 1411 aa9.61□□□□□ -0.87
SDHC-207ENST00000504963 YTHDC2Q9H6S0 1430 aaKnown RBP9.61□□□□□ -0.87
SDHC-207ENST00000504963 CPS1P31327 1500 aa9.6□□□□□ -0.87
SDHC-207ENST00000504963 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
SDHC-207ENST00000504963 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
SDHC-207ENST00000504963 PLEKHH1Q9ULM0 1364 aa9.6□□□□□ -0.87
SDHC-207ENST00000504963 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
SDHC-207ENST00000504963 DLC1Q96QB1 1528 aa9.59□□□□□ -0.87
SDHC-207ENST00000504963 ABCC11Q96J66 1382 aa9.59□□□□□ -0.87
SDHC-207ENST00000504963 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
SDHC-207ENST00000504963 DMRT2Q9Y5R5 561 aa9.58□□□□□ -0.88
SDHC-207ENST00000504963 USP47Q96K76 1375 aa9.58□□□□□ -0.88
SDHC-207ENST00000504963 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
SDHC-207ENST00000504963 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
SDHC-207ENST00000504963 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
SDHC-207ENST00000504963 HDGFP51858 240 aaKnown RBP9.57□□□□□ -0.88
SDHC-207ENST00000504963 TESK2Q96S53 571 aa9.57□□□□□ -0.88
SDHC-207ENST00000504963 HIRIP3Q9BW71 556 aaPredicted RBP9.57□□□□□ -0.88
SDHC-207ENST00000504963 PIK3R4Q99570 1358 aa9.56□□□□□ -0.88
SDHC-207ENST00000504963 KCNA6P17658 529 aa9.56□□□□□ -0.88
SDHC-207ENST00000504963 CARD11Q9BXL7 1154 aa9.56□□□□□ -0.88
SDHC-207ENST00000504963 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
SDHC-207ENST00000504963 PTCH1Q13635 1447 aa9.56□□□□□ -0.88
SDHC-207ENST00000504963 STK26Q9P289 416 aa9.55□□□□□ -0.88
SDHC-207ENST00000504963 AMOTL2Q9Y2J4 779 aa9.55□□□□□ -0.88
SDHC-207ENST00000504963 NALCNQ8IZF0 1738 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms