RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 LOC105371045A0A1W2PR82 267 aa10.84□□□□□ -0.67
NPIPB3-203ENST00000504841 MSH6P52701 1360 aa10.84□□□□□ -0.67
NPIPB3-203ENST00000504841 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
NPIPB3-203ENST00000504841 NKTRP30414 1462 aaKnown RBP10.83□□□□□ -0.68
NPIPB3-203ENST00000504841 PHLPP1O60346 1717 aa10.83□□□□□ -0.68
NPIPB3-203ENST00000504841 TET3O43151 1660 aa10.82□□□□□ -0.68
NPIPB3-203ENST00000504841 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
NPIPB3-203ENST00000504841 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
NPIPB3-203ENST00000504841 KCNA4P22459 653 aa10.82□□□□□ -0.68
NPIPB3-203ENST00000504841 LMTK2Q8IWU2 1503 aa10.82□□□□□ -0.68
NPIPB3-203ENST00000504841 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
NPIPB3-203ENST00000504841 APLP2Q06481 763 aa10.81□□□□□ -0.68
NPIPB3-203ENST00000504841 NOS1P29475 1434 aa10.81□□□□□ -0.68
NPIPB3-203ENST00000504841 JCADQ9P266 1359 aa10.8□□□□□ -0.68
NPIPB3-203ENST00000504841 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
NPIPB3-203ENST00000504841 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
NPIPB3-203ENST00000504841 FGD6Q6ZV73 1430 aa10.8□□□□□ -0.68
NPIPB3-203ENST00000504841 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-203ENST00000504841 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
NPIPB3-203ENST00000504841 TRIM52Q96A61 297 aa10.78□□□□□ -0.68
NPIPB3-203ENST00000504841 GCC2Q8IWJ2 1684 aa10.78□□□□□ -0.68
NPIPB3-203ENST00000504841 MYO5BQ9ULV0 1848 aa10.77□□□□□ -0.68
NPIPB3-203ENST00000504841 LRP6O75581 1613 aa10.77□□□□□ -0.68
NPIPB3-203ENST00000504841 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.68
NPIPB3-203ENST00000504841 RIMS2Q9UQ26 1411 aa10.77□□□□□ -0.68
NPIPB3-203ENST00000504841 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-203ENST00000504841 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.69
NPIPB3-203ENST00000504841 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
NPIPB3-203ENST00000504841 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
NPIPB3-203ENST00000504841 CHD2O14647 1828 aaKnown RBP10.75□□□□□ -0.69
NPIPB3-203ENST00000504841 FAM50AQ14320 339 aaKnown RBP10.75□□□□□ -0.69
NPIPB3-203ENST00000504841 ANKRD50Q9ULJ7 1429 aa10.75□□□□□ -0.69
NPIPB3-203ENST00000504841 RPRD2Q5VT52 1461 aaKnown RBP10.74□□□□□ -0.69
NPIPB3-203ENST00000504841 SPATA31A6Q5VVP1 1343 aa10.74□□□□□ -0.69
NPIPB3-203ENST00000504841 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 NUTM2BA6NNL0 878 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 NUTM2EB1AL46 878 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 ZNF772Q68DY9 489 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 NUTM2AQ8IVF1 878 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 ADGRL2O95490 1459 aa10.73□□□□□ -0.69
NPIPB3-203ENST00000504841 ATF3P18847 181 aa10.72□□□□□ -0.69
NPIPB3-203ENST00000504841 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
NPIPB3-203ENST00000504841 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.72□□□□□ -0.69
NPIPB3-203ENST00000504841 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 HOXD11P31277 338 aaPredicted RBP10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 SHPRHQ149N8 1683 aa10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
NPIPB3-203ENST00000504841 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
NPIPB3-203ENST00000504841 DIP2AQ14689 1571 aa10.69□□□□□ -0.7
NPIPB3-203ENST00000504841 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
NPIPB3-203ENST00000504841 RXRBP28702 533 aa10.69□□□□□ -0.7
NPIPB3-203ENST00000504841 BRINP3Q76B58 766 aa10.69□□□□□ -0.7
NPIPB3-203ENST00000504841 UNC13BO14795 1591 aa10.69□□□□□ -0.7
NPIPB3-203ENST00000504841 TRPM2O94759 1503 aa10.68□□□□□ -0.7
NPIPB3-203ENST00000504841 E9PCH4 1651 aa10.68□□□□□ -0.7
NPIPB3-203ENST00000504841 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
NPIPB3-203ENST00000504841 ASXL1Q8IXJ9 1541 aa10.67□□□□□ -0.7
NPIPB3-203ENST00000504841 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
NPIPB3-203ENST00000504841 PIK3R4Q99570 1358 aa10.66□□□□□ -0.7
NPIPB3-203ENST00000504841 AFF2P51816 1311 aa10.66□□□□□ -0.7
NPIPB3-203ENST00000504841 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
NPIPB3-203ENST00000504841 DDX17Q92841 729 aaKnown RBP10.64□□□□□ -0.71
NPIPB3-203ENST00000504841 IQGAP3Q86VI3 1631 aa10.64□□□□□ -0.71
NPIPB3-203ENST00000504841 RGS12O14924 1447 aa10.64□□□□□ -0.71
NPIPB3-203ENST00000504841 MST1RQ04912 1400 aa10.64□□□□□ -0.71
NPIPB3-203ENST00000504841 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
NPIPB3-203ENST00000504841 DCCP43146 1447 aa10.63□□□□□ -0.71
NPIPB3-203ENST00000504841 XRN1Q8IZH2 1706 aaKnown RBP10.63□□□□□ -0.71
NPIPB3-203ENST00000504841 NUP155O75694 1391 aa10.63□□□□□ -0.71
NPIPB3-203ENST00000504841 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
NPIPB3-203ENST00000504841 NRXN3Q9Y4C0 1643 aa10.62□□□□□ -0.71
NPIPB3-203ENST00000504841 SETD5Q9C0A6 1442 aa10.62□□□□□ -0.71
NPIPB3-203ENST00000504841 ITGAEP38570 1179 aa10.62□□□□□ -0.71
NPIPB3-203ENST00000504841 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
NPIPB3-203ENST00000504841 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
NPIPB3-203ENST00000504841 METP08581 1390 aa10.61□□□□□ -0.71
NPIPB3-203ENST00000504841 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
NPIPB3-203ENST00000504841 LRRC59Q96AG4 307 aaKnown RBP10.6□□□□□ -0.71
NPIPB3-203ENST00000504841 QTRT2Q9H974 415 aaKnown RBP10.6□□□□□ -0.71
NPIPB3-203ENST00000504841 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
NPIPB3-203ENST00000504841 ADGRL3Q9HAR2 1447 aa10.59□□□□□ -0.71
NPIPB3-203ENST00000504841 NALCNQ8IZF0 1738 aa10.59□□□□□ -0.71
NPIPB3-203ENST00000504841 RBM6P78332 1123 aaKnown RBP10.59□□□□□ -0.71
NPIPB3-203ENST00000504841 SPHKAPQ2M3C7 1700 aa10.58□□□□□ -0.72
NPIPB3-203ENST00000504841 ROCK1Q13464 1354 aa10.58□□□□□ -0.72
NPIPB3-203ENST00000504841 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
NPIPB3-203ENST00000504841 C1orf167Q5SNV9 1468 aa10.55□□□□□ -0.72
NPIPB3-203ENST00000504841 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
NPIPB3-203ENST00000504841 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
NPIPB3-203ENST00000504841 USP21Q9UK80 565 aa10.55□□□□□ -0.72
NPIPB3-203ENST00000504841 CLTCL1P53675 1640 aa10.55□□□□□ -0.72
NPIPB3-203ENST00000504841 ORAI2Q96SN7 254 aa10.54□□□□□ -0.72
NPIPB3-203ENST00000504841 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
NPIPB3-203ENST00000504841 TRPC5Q9UL62 973 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms