RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 CARD11Q9BXL7 1154 aa9.15□□□□□ -0.94
KLHL3-205ENST00000504496 FRMPD1Q5SYB0 1578 aa9.15□□□□□ -0.94
KLHL3-205ENST00000504496 ABCA6Q8N139 1617 aa9.15□□□□□ -0.94
KLHL3-205ENST00000504496 ZMYM4Q5VZL5 1548 aa9.14□□□□□ -0.95
KLHL3-205ENST00000504496 E9PCH4 1651 aa9.14□□□□□ -0.95
KLHL3-205ENST00000504496 PRDM15P57071 1507 aaPredicted RBP9.14□□□□□ -0.95
KLHL3-205ENST00000504496 NUP155O75694 1391 aa9.13□□□□□ -0.95
KLHL3-205ENST00000504496 UHRF1BP1Q6BDS2 1440 aa9.13□□□□□ -0.95
KLHL3-205ENST00000504496 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
KLHL3-205ENST00000504496 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
KLHL3-205ENST00000504496 RNF123Q5XPI4 1314 aa9.13□□□□□ -0.95
KLHL3-205ENST00000504496 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
KLHL3-205ENST00000504496 ANP32AP39687 249 aaKnown RBP9.12□□□□□ -0.95
KLHL3-205ENST00000504496 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
KLHL3-205ENST00000504496 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
KLHL3-205ENST00000504496 DIP2CQ9Y2E4 1556 aa9.12□□□□□ -0.95
KLHL3-205ENST00000504496 NBR1Q14596 966 aa9.12□□□□□ -0.95
KLHL3-205ENST00000504496 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
KLHL3-205ENST00000504496 TET3O43151 1660 aa9.11□□□□□ -0.95
KLHL3-205ENST00000504496 MYBBP1AQ9BQG0 1328 aaKnown RBP9.11□□□□□ -0.95
KLHL3-205ENST00000504496 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
KLHL3-205ENST00000504496 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
KLHL3-205ENST00000504496 A2MP01023 1474 aa9.1□□□□□ -0.95
KLHL3-205ENST00000504496 ST20-MTHFSA0A0A6YYL1 179 aa9.1□□□□□ -0.95
KLHL3-205ENST00000504496 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
KLHL3-205ENST00000504496 DCAF11Q8TEB1 546 aa9.1□□□□□ -0.95
KLHL3-205ENST00000504496 BRD4O60885 1362 aaPredicted RBP9.1□□□□□ -0.95
KLHL3-205ENST00000504496 RALBP1Q15311 655 aa9.09□□□□□ -0.95
KLHL3-205ENST00000504496 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
KLHL3-205ENST00000504496 KTN1Q86UP2 1357 aaKnown RBP9.08□□□□□ -0.96
KLHL3-205ENST00000504496 IPO9Q96P70 1041 aaKnown RBP9.08□□□□□ -0.96
KLHL3-205ENST00000504496 TRPM1Q7Z4N2 1603 aa9.08□□□□□ -0.96
KLHL3-205ENST00000504496 REREQ9P2R6 1566 aa9.08□□□□□ -0.96
KLHL3-205ENST00000504496 RRP1P56182 461 aaKnown RBP9.08□□□□□ -0.96
KLHL3-205ENST00000504496 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
KLHL3-205ENST00000504496 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
KLHL3-205ENST00000504496 CEP152O94986 1710 aa9.07□□□□□ -0.96
KLHL3-205ENST00000504496 SPHKAPQ2M3C7 1700 aa9.07□□□□□ -0.96
KLHL3-205ENST00000504496 ATP10AO60312 1499 aa9.07□□□□□ -0.96
KLHL3-205ENST00000504496 LMTK2Q8IWU2 1503 aa9.07□□□□□ -0.96
KLHL3-205ENST00000504496 ZC3H13Q5T200 1668 aaKnown RBP9.06□□□□□ -0.96
KLHL3-205ENST00000504496 RAPGEF3O95398 923 aa9.06□□□□□ -0.96
KLHL3-205ENST00000504496 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-205ENST00000504496 EFCAB6Q5THR3 1501 aa9.06□□□□□ -0.96
KLHL3-205ENST00000504496 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
KLHL3-205ENST00000504496 EXOC6Q8TAG9 804 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
KLHL3-205ENST00000504496 RCAN3Q9UKA8 241 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 ARHGEF40Q8TER5 1519 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 TRPM2O94759 1503 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 DSG3P32926 999 aa9.05□□□□□ -0.96
KLHL3-205ENST00000504496 KANK1Q14678 1352 aa9.04□□□□□ -0.96
KLHL3-205ENST00000504496 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
KLHL3-205ENST00000504496 NLRP13Q86W25 1043 aa9.04□□□□□ -0.96
KLHL3-205ENST00000504496 CAMSAP1Q5T5Y3 1602 aa9.03□□□□□ -0.96
KLHL3-205ENST00000504496 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
KLHL3-205ENST00000504496 TCERG1O14776 1098 aaKnown RBP9.03□□□□□ -0.96
KLHL3-205ENST00000504496 KIF3BO15066 747 aa9.03□□□□□ -0.96
KLHL3-205ENST00000504496 PRAG1Q86YV5 1406 aa9.03□□□□□ -0.96
KLHL3-205ENST00000504496 ABCC3O15438 1527 aa9.02□□□□□ -0.96
KLHL3-205ENST00000504496 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.96
KLHL3-205ENST00000504496 LAMC1P11047 1609 aa9.02□□□□□ -0.97
KLHL3-205ENST00000504496 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.97
KLHL3-205ENST00000504496 PDE3BQ13370 1112 aa9.02□□□□□ -0.97
KLHL3-205ENST00000504496 RGL3Q3MIN7 710 aa9.02□□□□□ -0.97
KLHL3-205ENST00000504496 AGLP35573 1532 aa9.02□□□□□ -0.97
KLHL3-205ENST00000504496 SIGLEC1Q9BZZ2 1709 aa9.02□□□□□ -0.97
KLHL3-205ENST00000504496 PTPRTO14522 1441 aa9.01□□□□□ -0.97
KLHL3-205ENST00000504496 ABCB7O75027 752 aa9.01□□□□□ -0.97
KLHL3-205ENST00000504496 CLTCL1P53675 1640 aa9.01□□□□□ -0.97
KLHL3-205ENST00000504496 CC2D1BQ5T0F9 858 aaKnown RBP9.01□□□□□ -0.97
KLHL3-205ENST00000504496 DNAJC5Q9H3Z4 198 aa9.01□□□□□ -0.97
KLHL3-205ENST00000504496 NEURL4Q96JN8 1562 aa9□□□□□ -0.97
KLHL3-205ENST00000504496 PDE4AP27815 886 aa8.99□□□□□ -0.97
KLHL3-205ENST00000504496 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
KLHL3-205ENST00000504496 CDCA7LQ96GN5 454 aa8.99□□□□□ -0.97
KLHL3-205ENST00000504496 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
KLHL3-205ENST00000504496 BLMP54132 1417 aaPredicted RBP8.98□□□□□ -0.97
KLHL3-205ENST00000504496 KIF1BO60333 1816 aa8.98□□□□□ -0.97
KLHL3-205ENST00000504496 PLIN1O60240 522 aa8.98□□□□□ -0.97
KLHL3-205ENST00000504496 MS4A1P11836 297 aa8.97□□□□□ -0.97
KLHL3-205ENST00000504496 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
KLHL3-205ENST00000504496 NPATQ14207 1427 aa8.97□□□□□ -0.97
KLHL3-205ENST00000504496 GPRASP1Q5JY77 1395 aa8.97□□□□□ -0.97
KLHL3-205ENST00000504496 ARHGAP31Q2M1Z3 1444 aa8.96□□□□□ -0.97
KLHL3-205ENST00000504496 TMF1P82094 1093 aa8.96□□□□□ -0.97
KLHL3-205ENST00000504496 PANK3Q9H999 370 aa8.96□□□□□ -0.97
KLHL3-205ENST00000504496 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.97
KLHL3-205ENST00000504496 PIK3C2BO00750 1634 aa8.96□□□□□ -0.97
KLHL3-205ENST00000504496 MROH2AA6NES4 1674 aa8.96□□□□□ -0.97
KLHL3-205ENST00000504496 IFT172Q9UG01 1749 aa8.96□□□□□ -0.98
KLHL3-205ENST00000504496 PER1O15534 1290 aaPredicted RBP8.96□□□□□ -0.98
KLHL3-205ENST00000504496 BACH2Q9BYV9 841 aa8.96□□□□□ -0.98
KLHL3-205ENST00000504496 PREX1Q8TCU6 1659 aa8.96□□□□□ -0.98
KLHL3-205ENST00000504496 UGGT1Q9NYU2 1555 aa8.95□□□□□ -0.98
KLHL3-205ENST00000504496 CLTCQ00610 1675 aaKnown RBP8.95□□□□□ -0.98
KLHL3-205ENST00000504496 LHX8Q68G74 356 aa8.95□□□□□ -0.98
KLHL3-205ENST00000504496 PCDH10Q9P2E7 1040 aa8.95□□□□□ -0.98
KLHL3-205ENST00000504496 WASHC2CQ9Y4E1 1318 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms