RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 LTKP29376 864 aa26.53■■□□□ 1.84
DDR1-252ENST00000504152 ARHGAP23Q9P227 1491 aa26.53■■□□□ 1.84
DDR1-252ENST00000504152 RGL3Q3MIN7 710 aa26.51■■□□□ 1.83
DDR1-252ENST00000504152 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
DDR1-252ENST00000504152 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
DDR1-252ENST00000504152 PPP1R15AO75807 674 aaPredicted RBP26.49■■□□□ 1.83
DDR1-252ENST00000504152 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
DDR1-252ENST00000504152 NUTM2DQ5VT03 806 aaPredicted RBP26.46■■□□□ 1.83
DDR1-252ENST00000504152 POLR1AO95602 1720 aaPredicted RBP26.45■■□□□ 1.83
DDR1-252ENST00000504152 BCANQ96GW7 911 aa26.45■■□□□ 1.82
DDR1-252ENST00000504152 ZFYVE9O95405 1425 aa26.45■■□□□ 1.82
DDR1-252ENST00000504152 VGFO15240 615 aaPredicted RBP26.44■■□□□ 1.82
DDR1-252ENST00000504152 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
DDR1-252ENST00000504152 MED14O60244 1454 aa26.43■■□□□ 1.82
DDR1-252ENST00000504152 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
DDR1-252ENST00000504152 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
DDR1-252ENST00000504152 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
DDR1-252ENST00000504152 NEUROD1Q13562 356 aa26.4■■□□□ 1.82
DDR1-252ENST00000504152 PLEKHG1Q9ULL1 1385 aa26.37■■□□□ 1.81
DDR1-252ENST00000504152 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
DDR1-252ENST00000504152 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
DDR1-252ENST00000504152 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
DDR1-252ENST00000504152 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
DDR1-252ENST00000504152 STAC3Q96MF2 364 aa26.34■■□□□ 1.81
DDR1-252ENST00000504152 DCAF11Q8TEB1 546 aa26.33■■□□□ 1.81
DDR1-252ENST00000504152 SLC26A8Q96RN1 970 aa26.33■■□□□ 1.81
DDR1-252ENST00000504152 PPLO60437 1756 aa26.31■■□□□ 1.8
DDR1-252ENST00000504152 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
DDR1-252ENST00000504152 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
DDR1-252ENST00000504152 KDM2AQ9Y2K7 1162 aa26.3■■□□□ 1.8
DDR1-252ENST00000504152 ADGRF5Q8IZF2 1346 aa26.27■■□□□ 1.8
DDR1-252ENST00000504152 DISP3Q9P2K9 1392 aa26.26■■□□□ 1.79
DDR1-252ENST00000504152 ILDR2Q71H61 639 aa26.25■■□□□ 1.79
DDR1-252ENST00000504152 IFT172Q9UG01 1749 aa26.25■■□□□ 1.79
DDR1-252ENST00000504152 L3MBTL2Q969R5 705 aa26.23■■□□□ 1.79
DDR1-252ENST00000504152 ZNF335Q9H4Z2 1342 aaPredicted RBP26.22■■□□□ 1.79
DDR1-252ENST00000504152 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
DDR1-252ENST00000504152 LTBP4Q8N2S1 1624 aa26.21■■□□□ 1.79
DDR1-252ENST00000504152 SETBP1Q9Y6X0 1596 aa26.21■■□□□ 1.79
DDR1-252ENST00000504152 MYOM2P54296 1465 aa26.2■■□□□ 1.78
DDR1-252ENST00000504152 KCNA6P17658 529 aa26.19■■□□□ 1.78
DDR1-252ENST00000504152 TONSLQ96HA7 1378 aa26.19■■□□□ 1.78
DDR1-252ENST00000504152 DIP2AQ14689 1571 aa26.18■■□□□ 1.78
DDR1-252ENST00000504152 PIK3R4Q99570 1358 aa26.17■■□□□ 1.78
DDR1-252ENST00000504152 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
DDR1-252ENST00000504152 PIK3C2GO75747 1445 aa26.15■■□□□ 1.78
DDR1-252ENST00000504152 NRXN3Q9Y4C0 1643 aa26.15■■□□□ 1.78
DDR1-252ENST00000504152 SOCS7O14512 581 aa26.15■■□□□ 1.78
DDR1-252ENST00000504152 NRXN1Q9ULB1 1477 aa26.15■■□□□ 1.78
DDR1-252ENST00000504152 ALKQ9UM73 1620 aa26.14■■□□□ 1.78
DDR1-252ENST00000504152 CFAP70Q5T0N1 1121 aa26.13■■□□□ 1.77
DDR1-252ENST00000504152 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
DDR1-252ENST00000504152 AMOTL2Q9Y2J4 779 aa26.13■■□□□ 1.77
DDR1-252ENST00000504152 METP08581 1390 aa26.12■■□□□ 1.77
DDR1-252ENST00000504152 CHD2O14647 1828 aaKnown RBP26.1■■□□□ 1.77
DDR1-252ENST00000504152 PROSER2Q86WR7 435 aaPredicted RBP26.08■■□□□ 1.77
DDR1-252ENST00000504152 CPS1P31327 1500 aa26.08■■□□□ 1.77
DDR1-252ENST00000504152 TMEM132EQ6IEE7 984 aa26.07■■□□□ 1.76
DDR1-252ENST00000504152 IQSEC2Q5JU85 1478 aa26.06■■□□□ 1.76
DDR1-252ENST00000504152 STRCP1A6NGW2 1772 aa26.05■■□□□ 1.76
DDR1-252ENST00000504152 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
DDR1-252ENST00000504152 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
DDR1-252ENST00000504152 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
DDR1-252ENST00000504152 LAMC1P11047 1609 aa26.03■■□□□ 1.76
DDR1-252ENST00000504152 STK26Q9P289 416 aa26.03■■□□□ 1.76
DDR1-252ENST00000504152 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
DDR1-252ENST00000504152 NKTRP30414 1462 aaKnown RBP25.99■■□□□ 1.75
DDR1-252ENST00000504152 LRPPRCP42704 1394 aaKnown RBP25.99■■□□□ 1.75
DDR1-252ENST00000504152 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
DDR1-252ENST00000504152 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
DDR1-252ENST00000504152 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
DDR1-252ENST00000504152 NBPF1Q3BBV0 1214 aa25.97■■□□□ 1.75
DDR1-252ENST00000504152 KIAA1210Q9ULL0 1709 aa25.97■■□□□ 1.75
DDR1-252ENST00000504152 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
DDR1-252ENST00000504152 RBM33Q96EV2 1170 aaKnown RBP25.96■■□□□ 1.75
DDR1-252ENST00000504152 TMEM94Q12767 1356 aa25.95■■□□□ 1.75
DDR1-252ENST00000504152 SIRT1Q96EB6 747 aa25.95■■□□□ 1.74
DDR1-252ENST00000504152 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
DDR1-252ENST00000504152 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
DDR1-252ENST00000504152 TRAK1Q9UPV9 953 aa25.93■■□□□ 1.74
DDR1-252ENST00000504152 ASXL1Q8IXJ9 1541 aa25.93■■□□□ 1.74
DDR1-252ENST00000504152 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
DDR1-252ENST00000504152 UBAP1LF5GYI3 381 aa25.91■■□□□ 1.74
DDR1-252ENST00000504152 ADGRB1O14514 1584 aa25.9■■□□□ 1.74
DDR1-252ENST00000504152 ROBO2Q9HCK4 1378 aa25.9■■□□□ 1.74
DDR1-252ENST00000504152 TECPR2O15040 1411 aa25.89■■□□□ 1.74
DDR1-252ENST00000504152 PTCH1Q13635 1447 aa25.89■■□□□ 1.74
DDR1-252ENST00000504152 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.74
DDR1-252ENST00000504152 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
DDR1-252ENST00000504152 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
DDR1-252ENST00000504152 POGKQ9P215 609 aa25.88■■□□□ 1.73
DDR1-252ENST00000504152 TRPM1Q7Z4N2 1603 aa25.88■■□□□ 1.73
DDR1-252ENST00000504152 FAM135BQ49AJ0 1406 aa25.86■■□□□ 1.73
DDR1-252ENST00000504152 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
DDR1-252ENST00000504152 MSH6P52701 1360 aa25.85■■□□□ 1.73
DDR1-252ENST00000504152 TOM1O60784 492 aa25.85■■□□□ 1.73
DDR1-252ENST00000504152 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
DDR1-252ENST00000504152 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
DDR1-252ENST00000504152 CARD11Q9BXL7 1154 aa25.84■■□□□ 1.73
DDR1-252ENST00000504152 DLC1Q96QB1 1528 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms