RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
PDLIM7-210ENST00000503827 LRP6O75581 1613 aa25.02■■□□□ 1.6
PDLIM7-210ENST00000503827 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
PDLIM7-210ENST00000503827 ABCC5O15440 1437 aa25.02■■□□□ 1.6
PDLIM7-210ENST00000503827 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
PDLIM7-210ENST00000503827 KANK4Q5T7N3 995 aaPredicted RBP25.01■■□□□ 1.59
PDLIM7-210ENST00000503827 SLC52A1Q9NWF4 448 aa25■■□□□ 1.59
PDLIM7-210ENST00000503827 NOS1P29475 1434 aa25■■□□□ 1.59
PDLIM7-210ENST00000503827 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
PDLIM7-210ENST00000503827 MYO5BQ9ULV0 1848 aa24.98■■□□□ 1.59
PDLIM7-210ENST00000503827 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
PDLIM7-210ENST00000503827 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
PDLIM7-210ENST00000503827 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.59
PDLIM7-210ENST00000503827 RXRBP28702 533 aa24.95■■□□□ 1.58
PDLIM7-210ENST00000503827 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
PDLIM7-210ENST00000503827 C14orf37Q86TY3 774 aa24.95■■□□□ 1.58
PDLIM7-210ENST00000503827 DAPK1P53355 1430 aa24.95■■□□□ 1.58
PDLIM7-210ENST00000503827 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-210ENST00000503827 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-210ENST00000503827 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
PDLIM7-210ENST00000503827 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-210ENST00000503827 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
PDLIM7-210ENST00000503827 CADPS2Q86UW7 1296 aa24.92■■□□□ 1.58
PDLIM7-210ENST00000503827 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
PDLIM7-210ENST00000503827 TBX22Q9Y458 520 aa24.9■■□□□ 1.58
PDLIM7-210ENST00000503827 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-210ENST00000503827 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
PDLIM7-210ENST00000503827 ATF3P18847 181 aa24.89■■□□□ 1.58
PDLIM7-210ENST00000503827 C19orf44Q9H6X5 657 aa24.88■■□□□ 1.57
PDLIM7-210ENST00000503827 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
PDLIM7-210ENST00000503827 RPRD2Q5VT52 1461 aaKnown RBP24.88■■□□□ 1.57
PDLIM7-210ENST00000503827 TMEM131LA2VDJ0 1609 aa24.86■■□□□ 1.57
PDLIM7-210ENST00000503827 NUTM2BA6NNL0 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-210ENST00000503827 NUTM2EB1AL46 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-210ENST00000503827 NUTM2AQ8IVF1 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-210ENST00000503827 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
PDLIM7-210ENST00000503827 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.57
PDLIM7-210ENST00000503827 AFF2P51816 1311 aa24.81■■□□□ 1.56
PDLIM7-210ENST00000503827 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
PDLIM7-210ENST00000503827 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
PDLIM7-210ENST00000503827 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
PDLIM7-210ENST00000503827 CHGAP10645 457 aaKnown RBP24.78■■□□□ 1.56
PDLIM7-210ENST00000503827 APLP2Q06481 763 aa24.75■■□□□ 1.55
PDLIM7-210ENST00000503827 TRPM2O94759 1503 aa24.75■■□□□ 1.55
PDLIM7-210ENST00000503827 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
PDLIM7-210ENST00000503827 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
PDLIM7-210ENST00000503827 ASXL1Q8IXJ9 1541 aa24.73■■□□□ 1.55
PDLIM7-210ENST00000503827 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
PDLIM7-210ENST00000503827 NHSL1Q5SYE7 1610 aa24.72■■□□□ 1.55
PDLIM7-210ENST00000503827 RGS12O14924 1447 aa24.72■■□□□ 1.55
PDLIM7-210ENST00000503827 DCCP43146 1447 aa24.72■■□□□ 1.55
PDLIM7-210ENST00000503827 RBM6P78332 1123 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-210ENST00000503827 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
PDLIM7-210ENST00000503827 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
PDLIM7-210ENST00000503827 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
PDLIM7-210ENST00000503827 QTRT2Q9H974 415 aaKnown RBP24.71■■□□□ 1.55
PDLIM7-210ENST00000503827 C8orf37Q96NL8 207 aa24.69■■□□□ 1.54
PDLIM7-210ENST00000503827 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
PDLIM7-210ENST00000503827 E9PCH4 1651 aa24.66■■□□□ 1.54
PDLIM7-210ENST00000503827 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
PDLIM7-210ENST00000503827 UNC13BO14795 1591 aa24.66■■□□□ 1.54
PDLIM7-210ENST00000503827 MST1RQ04912 1400 aa24.65■■□□□ 1.54
PDLIM7-210ENST00000503827 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
PDLIM7-210ENST00000503827 FOXD1Q16676 465 aa24.63■■□□□ 1.53
PDLIM7-210ENST00000503827 NGLY1Q96IV0 654 aa24.63■■□□□ 1.53
PDLIM7-210ENST00000503827 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
PDLIM7-210ENST00000503827 ATAD2Q6PL18 1390 aa24.61■■□□□ 1.53
PDLIM7-210ENST00000503827 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
PDLIM7-210ENST00000503827 NRXN3Q9Y4C0 1643 aa24.57■■□□□ 1.52
PDLIM7-210ENST00000503827 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
PDLIM7-210ENST00000503827 ADAMTS2O95450 1211 aa24.56■■□□□ 1.52
PDLIM7-210ENST00000503827 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
PDLIM7-210ENST00000503827 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
PDLIM7-210ENST00000503827 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
PDLIM7-210ENST00000503827 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
PDLIM7-210ENST00000503827 NALCNQ8IZF0 1738 aa24.52■■□□□ 1.52
PDLIM7-210ENST00000503827 USP21Q9UK80 565 aa24.52■■□□□ 1.52
PDLIM7-210ENST00000503827 TRPC5Q9UL62 973 aaPredicted RBP24.51■■□□□ 1.51
PDLIM7-210ENST00000503827 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
PDLIM7-210ENST00000503827 METP08581 1390 aa24.49■■□□□ 1.51
PDLIM7-210ENST00000503827 LAMC1P11047 1609 aa24.48■■□□□ 1.51
PDLIM7-210ENST00000503827 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
PDLIM7-210ENST00000503827 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
PDLIM7-210ENST00000503827 PTCH1Q13635 1447 aa24.45■■□□□ 1.51
PDLIM7-210ENST00000503827 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
PDLIM7-210ENST00000503827 SPHKAPQ2M3C7 1700 aa24.44■■□□□ 1.5
PDLIM7-210ENST00000503827 FNBP4Q8N3X1 1017 aaPredicted RBP24.44■■□□□ 1.5
PDLIM7-210ENST00000503827 NUP155O75694 1391 aa24.43■■□□□ 1.5
PDLIM7-210ENST00000503827 ATRNO75882 1429 aa24.43■■□□□ 1.5
PDLIM7-210ENST00000503827 SOS2Q07890 1332 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-210ENST00000503827 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
PDLIM7-210ENST00000503827 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.5
PDLIM7-210ENST00000503827 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
PDLIM7-210ENST00000503827 MARF1Q9Y4F3 1742 aaKnown RBP24.38■■□□□ 1.49
PDLIM7-210ENST00000503827 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
PDLIM7-210ENST00000503827 EP400Q96L91 3159 aa24.32■■□□□ 1.48
PDLIM7-210ENST00000503827 KIF1BO60333 1816 aa24.32■■□□□ 1.48
PDLIM7-210ENST00000503827 BCL9LQ86UU0 1499 aa24.31■■□□□ 1.48
PDLIM7-210ENST00000503827 GJD4Q96KN9 370 aaPredicted RBP24.3■■□□□ 1.48
PDLIM7-210ENST00000503827 MYOM2P54296 1465 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms