RNA–Protein interactions for RNA: ENST00000503705.5

CENPE-203, Transcript of centromere protein E, humanhuman

TSL 2

Gene CENPE, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-203ENST00000503705 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
CENPE-203ENST00000503705 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
CENPE-203ENST00000503705 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
CENPE-203ENST00000503705 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
CENPE-203ENST00000503705 SETBP1Q9Y6X0 1596 aa12.2□□□□□ -0.46
CENPE-203ENST00000503705 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
CENPE-203ENST00000503705 KIF1BO60333 1816 aa12.18□□□□□ -0.46
CENPE-203ENST00000503705 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
CENPE-203ENST00000503705 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
CENPE-203ENST00000503705 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
CENPE-203ENST00000503705 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
CENPE-203ENST00000503705 NAIPQ13075 1403 aa12.16□□□□□ -0.46
CENPE-203ENST00000503705 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
CENPE-203ENST00000503705 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
CENPE-203ENST00000503705 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
CENPE-203ENST00000503705 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
CENPE-203ENST00000503705 PPLO60437 1756 aa12.15□□□□□ -0.46
CENPE-203ENST00000503705 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
CENPE-203ENST00000503705 PLEKHG1Q9ULL1 1385 aa12.13□□□□□ -0.47
CENPE-203ENST00000503705 NEXMIFQ5QGS0 1516 aa12.13□□□□□ -0.47
CENPE-203ENST00000503705 LAMC1P11047 1609 aa12.12□□□□□ -0.47
CENPE-203ENST00000503705 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
CENPE-203ENST00000503705 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
CENPE-203ENST00000503705 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
CENPE-203ENST00000503705 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
CENPE-203ENST00000503705 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
CENPE-203ENST00000503705 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
CENPE-203ENST00000503705 NEFLP07196 543 aa12.07□□□□□ -0.48
CENPE-203ENST00000503705 ADAMTS13Q76LX8 1427 aa12.05□□□□□ -0.48
CENPE-203ENST00000503705 RIMS2Q9UQ26 1411 aa12.05□□□□□ -0.48
CENPE-203ENST00000503705 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
CENPE-203ENST00000503705 BCL11AQ9H165 835 aa12.05□□□□□ -0.48
CENPE-203ENST00000503705 DCCP43146 1447 aa12.03□□□□□ -0.48
CENPE-203ENST00000503705 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
CENPE-203ENST00000503705 IDI1Q13907 227 aa12.03□□□□□ -0.48
CENPE-203ENST00000503705 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
CENPE-203ENST00000503705 AHDC1Q5TGY3 1603 aaPredicted RBP12.02□□□□□ -0.48
CENPE-203ENST00000503705 FKBP8Q14318 412 aa12.02□□□□□ -0.49
CENPE-203ENST00000503705 LTKP29376 864 aa12.02□□□□□ -0.49
CENPE-203ENST00000503705 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
CENPE-203ENST00000503705 NHSL1Q5SYE7 1610 aa12.01□□□□□ -0.49
CENPE-203ENST00000503705 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.01□□□□□ -0.49
CENPE-203ENST00000503705 NUP155O75694 1391 aa12.01□□□□□ -0.49
CENPE-203ENST00000503705 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.01□□□□□ -0.49
CENPE-203ENST00000503705 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
CENPE-203ENST00000503705 SHPRHQ149N8 1683 aa12□□□□□ -0.49
CENPE-203ENST00000503705 FAM135BQ49AJ0 1406 aa12□□□□□ -0.49
CENPE-203ENST00000503705 CHIC2Q9UKJ5 165 aa12□□□□□ -0.49
CENPE-203ENST00000503705 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
CENPE-203ENST00000503705 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
CENPE-203ENST00000503705 PTCH1Q13635 1447 aa11.99□□□□□ -0.49
CENPE-203ENST00000503705 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
CENPE-203ENST00000503705 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
CENPE-203ENST00000503705 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
CENPE-203ENST00000503705 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
CENPE-203ENST00000503705 MYOM2P54296 1465 aa11.98□□□□□ -0.49
CENPE-203ENST00000503705 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
CENPE-203ENST00000503705 KCNA6P17658 529 aa11.98□□□□□ -0.49
CENPE-203ENST00000503705 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
CENPE-203ENST00000503705 SPATA31E1Q6ZUB1 1445 aa11.97□□□□□ -0.49
CENPE-203ENST00000503705 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
CENPE-203ENST00000503705 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CENPE-203ENST00000503705 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
CENPE-203ENST00000503705 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
CENPE-203ENST00000503705 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.5
CENPE-203ENST00000503705 TECPR2O15040 1411 aa11.96□□□□□ -0.5
CENPE-203ENST00000503705 TXNDC2Q86VQ3 553 aa11.95□□□□□ -0.5
CENPE-203ENST00000503705 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
CENPE-203ENST00000503705 PHLPP1O60346 1717 aa11.93□□□□□ -0.5
CENPE-203ENST00000503705 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
CENPE-203ENST00000503705 PTPRUQ92729 1446 aa11.93□□□□□ -0.5
CENPE-203ENST00000503705 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
CENPE-203ENST00000503705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.58e-8■■■■□ 25
CENPE-203ENST00000503705 ADGRB2O60241 1585 aa11.92□□□□□ -0.5
CENPE-203ENST00000503705 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
CENPE-203ENST00000503705 ANP32EQ9BTT0 268 aa11.92□□□□□ -0.5
CENPE-203ENST00000503705 COL22A1Q8NFW1 1626 aaPredicted RBP11.92□□□□□ -0.5
CENPE-203ENST00000503705 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
CENPE-203ENST00000503705 TOM1O60784 492 aa11.91□□□□□ -0.5
CENPE-203ENST00000503705 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
CENPE-203ENST00000503705 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
CENPE-203ENST00000503705 FMN2Q9NZ56 1722 aa11.89□□□□□ -0.51
CENPE-203ENST00000503705 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
CENPE-203ENST00000503705 KIF1AQ12756 1690 aa11.88□□□□□ -0.51
CENPE-203ENST00000503705 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
CENPE-203ENST00000503705 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
CENPE-203ENST00000503705 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
CENPE-203ENST00000503705 NBR1Q14596 966 aa11.87□□□□□ -0.51
CENPE-203ENST00000503705 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
CENPE-203ENST00000503705 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
CENPE-203ENST00000503705 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 MSH6P52701 1360 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 MST1RQ04912 1400 aa11.84□□□□□ -0.51
CENPE-203ENST00000503705 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
CENPE-203ENST00000503705 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
CENPE-203ENST00000503705 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
CENPE-203ENST00000503705 METP08581 1390 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms