RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
MBD4-204ENST00000503197 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
MBD4-204ENST00000503197 NRXN1Q9ULB1 1477 aa21.74■■□□□ 1.07
MBD4-204ENST00000503197 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
MBD4-204ENST00000503197 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
MBD4-204ENST00000503197 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
MBD4-204ENST00000503197 RALGAPBQ86X10 1494 aa21.71■■□□□ 1.07
MBD4-204ENST00000503197 CEP170BQ9Y4F5 1589 aaPredicted RBP21.71■■□□□ 1.07
MBD4-204ENST00000503197 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
MBD4-204ENST00000503197 ZNF142P52746 1687 aaPredicted RBP21.7■■□□□ 1.06
MBD4-204ENST00000503197 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
MBD4-204ENST00000503197 RIMS2Q9UQ26 1411 aa21.69■■□□□ 1.06
MBD4-204ENST00000503197 PIK3C2GO75747 1445 aa21.68■■□□□ 1.06
MBD4-204ENST00000503197 TMEM2Q9UHN6 1383 aa21.67■■□□□ 1.06
MBD4-204ENST00000503197 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
MBD4-204ENST00000503197 KIAA1210Q9ULL0 1709 aa21.65■■□□□ 1.06
MBD4-204ENST00000503197 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
MBD4-204ENST00000503197 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.06
MBD4-204ENST00000503197 SLIT1O75093 1534 aa21.64■■□□□ 1.06
MBD4-204ENST00000503197 GPRASP1Q5JY77 1395 aa21.63■■□□□ 1.05
MBD4-204ENST00000503197 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
MBD4-204ENST00000503197 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
MBD4-204ENST00000503197 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
MBD4-204ENST00000503197 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
MBD4-204ENST00000503197 LAMC1P11047 1609 aa21.59■■□□□ 1.05
MBD4-204ENST00000503197 LTKP29376 864 aa21.59■■□□□ 1.05
MBD4-204ENST00000503197 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
MBD4-204ENST00000503197 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
MBD4-204ENST00000503197 NRXN3Q9Y4C0 1643 aa21.57■■□□□ 1.04
MBD4-204ENST00000503197 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
MBD4-204ENST00000503197 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
MBD4-204ENST00000503197 SETBP1Q9Y6X0 1596 aa21.56■■□□□ 1.04
MBD4-204ENST00000503197 ADGRB1O14514 1584 aa21.55■■□□□ 1.04
MBD4-204ENST00000503197 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
MBD4-204ENST00000503197 ALKQ9UM73 1620 aa21.55■■□□□ 1.04
MBD4-204ENST00000503197 IQGAP1P46940 1657 aa21.54■■□□□ 1.04
MBD4-204ENST00000503197 USP47Q96K76 1375 aa21.54■■□□□ 1.04
MBD4-204ENST00000503197 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
MBD4-204ENST00000503197 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
MBD4-204ENST00000503197 HSPA5P11021 654 aaKnown RBP21.54■■□□□ 1.04
MBD4-204ENST00000503197 SETD1AO15047 1707 aaKnown RBP21.54■■□□□ 1.04
MBD4-204ENST00000503197 SCAF11Q99590 1463 aaKnown RBP21.53■■□□□ 1.04
MBD4-204ENST00000503197 ASXL1Q8IXJ9 1541 aa21.53■■□□□ 1.04
MBD4-204ENST00000503197 EID1Q9Y6B2 187 aa21.52■■□□□ 1.04
MBD4-204ENST00000503197 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
MBD4-204ENST00000503197 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
MBD4-204ENST00000503197 TMEM132EQ6IEE7 984 aa21.5■■□□□ 1.03
MBD4-204ENST00000503197 ADAMTS13Q76LX8 1427 aa21.49■■□□□ 1.03
MBD4-204ENST00000503197 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
MBD4-204ENST00000503197 MED14O60244 1454 aa21.47■■□□□ 1.03
MBD4-204ENST00000503197 ANKLE2Q86XL3 938 aa21.46■■□□□ 1.03
MBD4-204ENST00000503197 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
MBD4-204ENST00000503197 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
MBD4-204ENST00000503197 METP08581 1390 aa21.44■■□□□ 1.02
MBD4-204ENST00000503197 BCANQ96GW7 911 aa21.43■■□□□ 1.02
MBD4-204ENST00000503197 YTHDC2Q9H6S0 1430 aaKnown RBP21.42■■□□□ 1.02
MBD4-204ENST00000503197 HSPA2P54652 639 aa21.41■■□□□ 1.02
MBD4-204ENST00000503197 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
MBD4-204ENST00000503197 DIP2AQ14689 1571 aa21.4■■□□□ 1.02
MBD4-204ENST00000503197 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
MBD4-204ENST00000503197 ARHGEF28Q8N1W1 1705 aaKnown RBP21.4■■□□□ 1.02
MBD4-204ENST00000503197 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.02
MBD4-204ENST00000503197 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
MBD4-204ENST00000503197 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
MBD4-204ENST00000503197 C11orf95C9JLR9 678 aaPredicted RBP21.38■■□□□ 1.01
MBD4-204ENST00000503197 TESK2Q96S53 571 aa21.38■■□□□ 1.01
MBD4-204ENST00000503197 STK26Q9P289 416 aa21.38■■□□□ 1.01
MBD4-204ENST00000503197 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
MBD4-204ENST00000503197 LRPPRCP42704 1394 aaKnown RBP21.37■■□□□ 1.01
MBD4-204ENST00000503197 ABCC11Q96J66 1382 aa21.34■■□□□ 1.01
MBD4-204ENST00000503197 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
MBD4-204ENST00000503197 KNDC1Q76NI1 1749 aa21.34■■□□□ 1.01
MBD4-204ENST00000503197 DLC1Q96QB1 1528 aa21.33■■□□□ 1.01
MBD4-204ENST00000503197 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1
MBD4-204ENST00000503197 STRCQ7RTU9 1775 aa21.33■■□□□ 1
MBD4-204ENST00000503197 TECPR2O15040 1411 aa21.33■■□□□ 1
MBD4-204ENST00000503197 QRICH2Q9H0J4 1663 aa21.32■■□□□ 1
MBD4-204ENST00000503197 CENPJQ9HC77 1338 aaPredicted RBP21.32■■□□□ 1
MBD4-204ENST00000503197 CPS1P31327 1500 aa21.3■■□□□ 1
MBD4-204ENST00000503197 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
MBD4-204ENST00000503197 PIK3R4Q99570 1358 aa21.3■■□□□ 1
MBD4-204ENST00000503197 CCDC7Q96M83 1385 aa21.29■■□□□ 1
MBD4-204ENST00000503197 DISP3Q9P2K9 1392 aa21.29■■□□□ 1
MBD4-204ENST00000503197 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
MBD4-204ENST00000503197 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
MBD4-204ENST00000503197 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
MBD4-204ENST00000503197 PRAM1Q96QH2 718 aa21.28■■□□□ 1
MBD4-204ENST00000503197 CHD2O14647 1828 aaKnown RBP21.28■■□□□ 1
MBD4-204ENST00000503197 ROBO2Q9HCK4 1378 aa21.27■■□□□ 1
MBD4-204ENST00000503197 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
MBD4-204ENST00000503197 AMOTL2Q9Y2J4 779 aa21.27■□□□□ 0.99
MBD4-204ENST00000503197 SIRT1Q96EB6 747 aa21.26■□□□□ 0.99
MBD4-204ENST00000503197 FAM135BQ49AJ0 1406 aa21.26■□□□□ 0.99
MBD4-204ENST00000503197 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
MBD4-204ENST00000503197 SAFB2Q14151 953 aaKnown RBP eCLIP21.25■□□□□ 0.99
MBD4-204ENST00000503197 TMF1P82094 1093 aa21.24■□□□□ 0.99
MBD4-204ENST00000503197 POGKQ9P215 609 aa21.24■□□□□ 0.99
MBD4-204ENST00000503197 PTCH1Q13635 1447 aa21.23■□□□□ 0.99
MBD4-204ENST00000503197 KCNA6P17658 529 aa21.22■□□□□ 0.99
MBD4-204ENST00000503197 TULP4Q9NRJ4 1543 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms