RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GLI2P10070 1586 aa15.85■□□□□ 0.13
USP46-204ENST00000503060 RAPGEF3O95398 923 aa15.83■□□□□ 0.12
USP46-204ENST00000503060 MRS2Q9HD23 443 aa15.83■□□□□ 0.12
USP46-204ENST00000503060 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
USP46-204ENST00000503060 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
USP46-204ENST00000503060 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
USP46-204ENST00000503060 COL17A1Q9UMD9 1497 aaPredicted RBP15.81■□□□□ 0.12
USP46-204ENST00000503060 TESK2Q96S53 571 aa15.8■□□□□ 0.12
USP46-204ENST00000503060 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
USP46-204ENST00000503060 DIP2CQ9Y2E4 1556 aa15.8■□□□□ 0.12
USP46-204ENST00000503060 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
USP46-204ENST00000503060 KIF1BO60333 1816 aa15.78■□□□□ 0.12
USP46-204ENST00000503060 GGT6Q6P531 493 aa15.78■□□□□ 0.12
USP46-204ENST00000503060 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
USP46-204ENST00000503060 ABCC3O15438 1527 aa15.77■□□□□ 0.12
USP46-204ENST00000503060 DISP3Q9P2K9 1392 aa15.77■□□□□ 0.12
USP46-204ENST00000503060 NPATQ14207 1427 aa15.77■□□□□ 0.11
USP46-204ENST00000503060 MYOM2P54296 1465 aa15.77■□□□□ 0.11
USP46-204ENST00000503060 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
USP46-204ENST00000503060 KIAA1210Q9ULL0 1709 aa15.76■□□□□ 0.11
USP46-204ENST00000503060 DIP2BQ9P265 1576 aa15.75■□□□□ 0.11
USP46-204ENST00000503060 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
USP46-204ENST00000503060 MROH2AA6NES4 1674 aa15.75■□□□□ 0.11
USP46-204ENST00000503060 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
USP46-204ENST00000503060 TMF1P82094 1093 aa15.75■□□□□ 0.11
USP46-204ENST00000503060 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
USP46-204ENST00000503060 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
USP46-204ENST00000503060 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
USP46-204ENST00000503060 ADGRB3O60242 1522 aa15.74■□□□□ 0.11
USP46-204ENST00000503060 FAM69CQ0P6D2 419 aa15.74■□□□□ 0.11
USP46-204ENST00000503060 YEATS2Q9ULM3 1422 aa15.73■□□□□ 0.11
USP46-204ENST00000503060 CAMSAP1Q5T5Y3 1602 aa15.73■□□□□ 0.11
USP46-204ENST00000503060 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
USP46-204ENST00000503060 RALBP1Q15311 655 aa15.72■□□□□ 0.11
USP46-204ENST00000503060 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
USP46-204ENST00000503060 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.1
USP46-204ENST00000503060 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
USP46-204ENST00000503060 NOS1P29475 1434 aa15.69■□□□□ 0.1
USP46-204ENST00000503060 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
USP46-204ENST00000503060 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
USP46-204ENST00000503060 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
USP46-204ENST00000503060 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
USP46-204ENST00000503060 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
USP46-204ENST00000503060 EIF3AQ14152 1382 aaKnown RBP15.68■□□□□ 0.1
USP46-204ENST00000503060 BRD2P25440 801 aaKnown RBP15.68■□□□□ 0.1
USP46-204ENST00000503060 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
USP46-204ENST00000503060 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
USP46-204ENST00000503060 CHGAP10645 457 aaKnown RBP15.68■□□□□ 0.1
USP46-204ENST00000503060 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
USP46-204ENST00000503060 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
USP46-204ENST00000503060 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
USP46-204ENST00000503060 PARD3Q8TEW0 1356 aa15.67■□□□□ 0.1
USP46-204ENST00000503060 FKBP8Q14318 412 aa15.67■□□□□ 0.1
USP46-204ENST00000503060 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
USP46-204ENST00000503060 PANK3Q9H999 370 aa15.66■□□□□ 0.1
USP46-204ENST00000503060 PPLO60437 1756 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 TSPOAP1O95153 1857 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 PNISRQ8TF01 805 aaKnown RBP15.65■□□□□ 0.1
USP46-204ENST00000503060 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 SYNMO15061 1565 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 CDCA8Q53HL2 280 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
USP46-204ENST00000503060 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
USP46-204ENST00000503060 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
USP46-204ENST00000503060 PIK3C2GO75747 1445 aa15.62■□□□□ 0.09
USP46-204ENST00000503060 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
USP46-204ENST00000503060 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
USP46-204ENST00000503060 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
USP46-204ENST00000503060 C14orf93Q9H972 538 aaKnown RBP15.6■□□□□ 0.09
USP46-204ENST00000503060 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
USP46-204ENST00000503060 MYO3AQ8NEV4 1616 aa15.59■□□□□ 0.09
USP46-204ENST00000503060 CDK11BP21127 795 aaKnown RBP15.59■□□□□ 0.09
USP46-204ENST00000503060 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
USP46-204ENST00000503060 DHX37Q8IY37 1157 aaKnown RBP15.59■□□□□ 0.09
USP46-204ENST00000503060 KDM5AP29375 1690 aaKnown RBP15.58■□□□□ 0.09
USP46-204ENST00000503060 ERVK-7P63135 1459 aa15.58■□□□□ 0.08
USP46-204ENST00000503060 AGLP35573 1532 aa15.58■□□□□ 0.08
USP46-204ENST00000503060 NEXMIFQ5QGS0 1516 aa15.58■□□□□ 0.08
USP46-204ENST00000503060 MYOM1P52179 1685 aa15.58■□□□□ 0.08
USP46-204ENST00000503060 PREX1Q8TCU6 1659 aa15.58■□□□□ 0.08
USP46-204ENST00000503060 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
USP46-204ENST00000503060 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
USP46-204ENST00000503060 IDI1Q13907 227 aa15.57■□□□□ 0.08
USP46-204ENST00000503060 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
USP46-204ENST00000503060 KIF13AQ9H1H9 1805 aa15.56■□□□□ 0.08
USP46-204ENST00000503060 KNSTRNQ9Y448 316 aa15.55■□□□□ 0.08
USP46-204ENST00000503060 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
USP46-204ENST00000503060 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
USP46-204ENST00000503060 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
USP46-204ENST00000503060 ASXL1Q8IXJ9 1541 aa15.53■□□□□ 0.08
USP46-204ENST00000503060 ZFYVE9O95405 1425 aa15.52■□□□□ 0.08
USP46-204ENST00000503060 SMG6Q86US8 1419 aaKnown RBP15.52■□□□□ 0.08
USP46-204ENST00000503060 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.08
USP46-204ENST00000503060 TMEM131LA2VDJ0 1609 aa15.52■□□□□ 0.07
USP46-204ENST00000503060 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.07
USP46-204ENST00000503060 NUTM2DQ5VT03 806 aaPredicted RBP15.51■□□□□ 0.07
USP46-204ENST00000503060 NPC1L1Q9UHC9 1359 aa15.51■□□□□ 0.07
USP46-204ENST00000503060 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
USP46-204ENST00000503060 QRICH2Q9H0J4 1663 aa15.5■□□□□ 0.07
USP46-204ENST00000503060 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms