RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 RALBP1Q15311 655 aa6.86□□□□□ -1.31
CLDND1-208ENST00000503004 ERBINQ96RT1 1412 aa6.85□□□□□ -1.31
CLDND1-208ENST00000503004 PANK3Q9H999 370 aa6.85□□□□□ -1.31
CLDND1-208ENST00000503004 GPRASP1Q5JY77 1395 aa6.85□□□□□ -1.31
CLDND1-208ENST00000503004 ABCC1P33527 1531 aa6.85□□□□□ -1.31
CLDND1-208ENST00000503004 CLASP1Q7Z460 1538 aa6.84□□□□□ -1.31
CLDND1-208ENST00000503004 BRD4O60885 1362 aaPredicted RBP6.84□□□□□ -1.31
CLDND1-208ENST00000503004 LRPPRCP42704 1394 aaKnown RBP6.84□□□□□ -1.31
CLDND1-208ENST00000503004 KTN1Q86UP2 1357 aaKnown RBP6.84□□□□□ -1.31
CLDND1-208ENST00000503004 NLRP13Q86W25 1043 aa6.84□□□□□ -1.31
CLDND1-208ENST00000503004 MAGI2Q86UL8 1455 aa6.84□□□□□ -1.31
CLDND1-208ENST00000503004 PARD3Q8TEW0 1356 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 KIF3BO15066 747 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 TMF1P82094 1093 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 ATP10AO60312 1499 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 COL17A1Q9UMD9 1497 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-208ENST00000503004 E9PCH4 1651 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
CLDND1-208ENST00000503004 UHRF1BP1LA0JNW5 1464 aa6.83□□□□□ -1.32
CLDND1-208ENST00000503004 PRDM15P57071 1507 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-208ENST00000503004 SCAPERQ9BY12 1400 aa6.82□□□□□ -1.32
CLDND1-208ENST00000503004 CDCA7LQ96GN5 454 aa6.82□□□□□ -1.32
CLDND1-208ENST00000503004 FANCAO15360 1455 aa6.82□□□□□ -1.32
CLDND1-208ENST00000503004 PAXIP1Q6ZW49 1069 aaPredicted RBP6.82□□□□□ -1.32
CLDND1-208ENST00000503004 ZFYVE16Q7Z3T8 1539 aa6.81□□□□□ -1.32
CLDND1-208ENST00000503004 RNF123Q5XPI4 1314 aa6.81□□□□□ -1.32
CLDND1-208ENST00000503004 BBXQ8WY36 941 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-208ENST00000503004 ZBTB47Q9UFB7 747 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-208ENST00000503004 WDR7Q9Y4E6 1490 aa6.81□□□□□ -1.32
CLDND1-208ENST00000503004 RTEL1-TNFRSF6BF6WH68 1400 aa6.8□□□□□ -1.32
CLDND1-208ENST00000503004 EIF2AK4Q9P2K8 1649 aaKnown RBP6.8□□□□□ -1.32
CLDND1-208ENST00000503004 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
CLDND1-208ENST00000503004 UGGT1Q9NYU2 1555 aa6.79□□□□□ -1.32
CLDND1-208ENST00000503004 NEFMP07197 916 aa6.79□□□□□ -1.32
CLDND1-208ENST00000503004 ANP32AP39687 249 aaKnown RBP6.79□□□□□ -1.32
CLDND1-208ENST00000503004 CFAP70Q5T0N1 1121 aa6.79□□□□□ -1.32
CLDND1-208ENST00000503004 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
CLDND1-208ENST00000503004 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 KNSTRNQ9Y448 316 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 CLTCL1P53675 1640 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 TRPM2O94759 1503 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 PTPRTO14522 1441 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 ASXL2Q76L83 1435 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 KANK1Q14678 1352 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 RRP1P56182 461 aaKnown RBP6.78□□□□□ -1.32
CLDND1-208ENST00000503004 EXOC6Q8TAG9 804 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 CFAP44Q96MT7 982 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 LAMC1P11047 1609 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 MADDQ8WXG6 1647 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 ADGRF5Q8IZF2 1346 aa6.78□□□□□ -1.32
CLDND1-208ENST00000503004 PLIN1O60240 522 aa6.77□□□□□ -1.32
CLDND1-208ENST00000503004 IPO9Q96P70 1041 aaKnown RBP6.77□□□□□ -1.32
CLDND1-208ENST00000503004 RNF17Q9BXT8 1623 aaKnown RBP6.77□□□□□ -1.33
CLDND1-208ENST00000503004 CHGAP10645 457 aaKnown RBP6.77□□□□□ -1.33
CLDND1-208ENST00000503004 ARAP3Q8WWN8 1544 aa6.77□□□□□ -1.33
CLDND1-208ENST00000503004 PPP2R1AP30153 589 aa6.77□□□□□ -1.33
CLDND1-208ENST00000503004 GGT6Q6P531 493 aa6.77□□□□□ -1.33
CLDND1-208ENST00000503004 FAM43AQ8N2R8 423 aa6.77□□□□□ -1.33
CLDND1-208ENST00000503004 SPHKAPQ2M3C7 1700 aa6.77□□□□□ -1.33
CLDND1-208ENST00000503004 SCAF11Q99590 1463 aaKnown RBP6.76□□□□□ -1.33
CLDND1-208ENST00000503004 ABCA9Q8IUA7 1624 aa6.76□□□□□ -1.33
CLDND1-208ENST00000503004 INO80Q9ULG1 1556 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-208ENST00000503004 DEPDC5O75140 1603 aa6.76□□□□□ -1.33
CLDND1-208ENST00000503004 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
CLDND1-208ENST00000503004 CEP152O94986 1710 aa6.75□□□□□ -1.33
CLDND1-208ENST00000503004 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
CLDND1-208ENST00000503004 TET3O43151 1660 aa6.75□□□□□ -1.33
CLDND1-208ENST00000503004 IQGAP1P46940 1657 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 BLMP54132 1417 aaPredicted RBP6.74□□□□□ -1.33
CLDND1-208ENST00000503004 NPM1P06748 294 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLDND1-208ENST00000503004 CDCA8Q53HL2 280 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 TAF7LQ5H9L4 462 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 MROH1Q8NDA8 1641 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 WDR43Q15061 677 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLDND1-208ENST00000503004 NUTM2DQ5VT03 806 aaPredicted RBP6.74□□□□□ -1.33
CLDND1-208ENST00000503004 CCDC146Q8IYE0 955 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 CFAP65Q6ZU64 1925 aaKnown RBP6.74□□□□□ -1.33
CLDND1-208ENST00000503004 VWDEQ8N2E2 1590 aa6.74□□□□□ -1.33
CLDND1-208ENST00000503004 RRP9O43818 475 aaKnown RBP6.73□□□□□ -1.33
CLDND1-208ENST00000503004 SKAP1Q86WV1 359 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 PRDM4Q9UKN5 801 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 TRAK1Q9UPV9 953 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 PLEKHH1Q9ULM0 1364 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
CLDND1-208ENST00000503004 RAPGEF3O95398 923 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 ATXN8OSP0DMR3 200 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 TMEM132EQ6IEE7 984 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 STAC3Q96MF2 364 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 CARD14Q9BXL6 1004 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 KIDINS220Q9ULH0 1771 aa6.73□□□□□ -1.33
CLDND1-208ENST00000503004 C20orf194Q5TEA3 1177 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 OSCARQ8IYS5 282 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 ZNF518AQ6AHZ1 1483 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 NOS1P29475 1434 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 CD109Q6YHK3 1445 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 EFCAB6Q5THR3 1501 aa6.72□□□□□ -1.33
CLDND1-208ENST00000503004 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
CLDND1-208ENST00000503004 GSE1Q14687 1217 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms