RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PREX1Q8TCU6 1659 aa30.52■■■□□ 2.48
PTPN13-205ENST00000502971 NRXN1Q9ULB1 1477 aa30.51■■■□□ 2.47
PTPN13-205ENST00000502971 SLC52A1Q9NWF4 448 aa30.5■■■□□ 2.47
PTPN13-205ENST00000502971 CHGAP10645 457 aaKnown RBP30.49■■■□□ 2.47
PTPN13-205ENST00000502971 CLTCQ00610 1675 aaKnown RBP30.48■■■□□ 2.47
PTPN13-205ENST00000502971 IQGAP1P46940 1657 aa30.46■■■□□ 2.47
PTPN13-205ENST00000502971 PPLO60437 1756 aa30.45■■■□□ 2.47
PTPN13-205ENST00000502971 ADGRF5Q8IZF2 1346 aa30.45■■■□□ 2.46
PTPN13-205ENST00000502971 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
PTPN13-205ENST00000502971 ZMYM3Q14202 1370 aa30.44■■■□□ 2.46
PTPN13-205ENST00000502971 TESK2Q96S53 571 aa30.42■■■□□ 2.46
PTPN13-205ENST00000502971 ERVK-7P63135 1459 aa30.41■■■□□ 2.46
PTPN13-205ENST00000502971 IDI1Q13907 227 aa30.41■■■□□ 2.46
PTPN13-205ENST00000502971 POLR3GLQ9BT43 218 aa30.4■■■□□ 2.46
PTPN13-205ENST00000502971 FER1L4A9Z1Z3 1794 aa30.37■■■□□ 2.45
PTPN13-205ENST00000502971 CFAP70Q5T0N1 1121 aa30.36■■■□□ 2.45
PTPN13-205ENST00000502971 EIF3AQ14152 1382 aaKnown RBP30.36■■■□□ 2.45
PTPN13-205ENST00000502971 PIK3C2GO75747 1445 aa30.36■■■□□ 2.45
PTPN13-205ENST00000502971 NEXMIFQ5QGS0 1516 aa30.35■■■□□ 2.45
PTPN13-205ENST00000502971 SETBP1Q9Y6X0 1596 aa30.35■■■□□ 2.45
PTPN13-205ENST00000502971 TMF1P82094 1093 aa30.34■■■□□ 2.45
PTPN13-205ENST00000502971 FBXO31Q5XUX0 539 aaPredicted RBP30.33■■■□□ 2.45
PTPN13-205ENST00000502971 PRKRIP1Q9H875 184 aaPredicted RBP30.33■■■□□ 2.45
PTPN13-205ENST00000502971 ADAMTSL3P82987 1691 aa30.33■■■□□ 2.45
PTPN13-205ENST00000502971 SPATA31D1Q6ZQQ2 1576 aa30.33■■■□□ 2.45
PTPN13-205ENST00000502971 VGFO15240 615 aaPredicted RBP30.33■■■□□ 2.45
PTPN13-205ENST00000502971 TMEM131LA2VDJ0 1609 aa30.32■■■□□ 2.45
PTPN13-205ENST00000502971 ZFYVE9O95405 1425 aa30.31■■■□□ 2.44
PTPN13-205ENST00000502971 C14orf93Q9H972 538 aaKnown RBP30.3■■■□□ 2.44
PTPN13-205ENST00000502971 DISP3Q9P2K9 1392 aa30.29■■■□□ 2.44
PTPN13-205ENST00000502971 SLC24A1O60721 1099 aa30.27■■■□□ 2.44
PTPN13-205ENST00000502971 MYO5BQ9ULV0 1848 aa30.26■■■□□ 2.43
PTPN13-205ENST00000502971 C3P01024 1663 aa30.24■■■□□ 2.43
PTPN13-205ENST00000502971 CDCA8Q53HL2 280 aa30.23■■■□□ 2.43
PTPN13-205ENST00000502971 ADGRB1O14514 1584 aa30.21■■■□□ 2.43
PTPN13-205ENST00000502971 RIMS1Q86UR5 1692 aaKnown RBP30.21■■■□□ 2.43
PTPN13-205ENST00000502971 TNRQ92752 1358 aa30.2■■■□□ 2.42
PTPN13-205ENST00000502971 MYO3AQ8NEV4 1616 aa30.2■■■□□ 2.42
PTPN13-205ENST00000502971 CEBPAP49715 358 aaPredicted RBP30.17■■■□□ 2.42
PTPN13-205ENST00000502971 STAG3Q9UJ98 1225 aa30.17■■■□□ 2.42
PTPN13-205ENST00000502971 KTN1Q86UP2 1357 aaKnown RBP30.15■■■□□ 2.42
PTPN13-205ENST00000502971 SBNO2Q9Y2G9 1366 aa30.15■■■□□ 2.42
PTPN13-205ENST00000502971 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
PTPN13-205ENST00000502971 NUTM2DQ5VT03 806 aaPredicted RBP30.14■■■□□ 2.42
PTPN13-205ENST00000502971 A2ML1A8K2U0 1454 aa30.13■■■□□ 2.41
PTPN13-205ENST00000502971 NLRP1Q9C000 1473 aa30.13■■■□□ 2.41
PTPN13-205ENST00000502971 KDM5AP29375 1690 aaKnown RBP30.12■■■□□ 2.41
PTPN13-205ENST00000502971 CENPJQ9HC77 1338 aaPredicted RBP30.1■■■□□ 2.41
PTPN13-205ENST00000502971 PTPRMP28827 1452 aa30.09■■■□□ 2.41
PTPN13-205ENST00000502971 PER1O15534 1290 aaPredicted RBP30.08■■■□□ 2.41
PTPN13-205ENST00000502971 TMEM132EQ6IEE7 984 aa30.08■■■□□ 2.41
PTPN13-205ENST00000502971 RALBP1Q15311 655 aa30.07■■■□□ 2.4
PTPN13-205ENST00000502971 TRAK1Q9UPV9 953 aa30.07■■■□□ 2.4
PTPN13-205ENST00000502971 PANK3Q9H999 370 aa30.06■■■□□ 2.4
PTPN13-205ENST00000502971 MRS2Q9HD23 443 aa30.05■■■□□ 2.4
PTPN13-205ENST00000502971 CCDC184Q52MB2 194 aa30.05■■■□□ 2.4
PTPN13-205ENST00000502971 RIMS2Q9UQ26 1411 aa30.04■■■□□ 2.4
PTPN13-205ENST00000502971 SETD1BQ9UPS6 1966 aaKnown RBP30.02■■■□□ 2.4
PTPN13-205ENST00000502971 PLPPR3Q6T4P5 718 aa30.02■■■□□ 2.4
PTPN13-205ENST00000502971 SCAF1Q9H7N4 1312 aaKnown RBP30.01■■■□□ 2.4
PTPN13-205ENST00000502971 QRICH2Q9H0J4 1663 aa30.01■■■□□ 2.39
PTPN13-205ENST00000502971 ASXL1Q8IXJ9 1541 aa30■■■□□ 2.39
PTPN13-205ENST00000502971 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.99■■■□□ 2.39
PTPN13-205ENST00000502971 ARHGEF28Q8N1W1 1705 aaKnown RBP29.99■■■□□ 2.39
PTPN13-205ENST00000502971 ALKQ9UM73 1620 aa29.99■■■□□ 2.39
PTPN13-205ENST00000502971 MYBBP1AQ9BQG0 1328 aaKnown RBP29.98■■■□□ 2.39
PTPN13-205ENST00000502971 MYOM1P52179 1685 aa29.98■■■□□ 2.39
PTPN13-205ENST00000502971 PARD3Q8TEW0 1356 aa29.97■■■□□ 2.39
PTPN13-205ENST00000502971 HDGFP51858 240 aaKnown RBP29.96■■■□□ 2.39
PTPN13-205ENST00000502971 UBR1Q8IWV7 1749 aa29.96■■■□□ 2.39
PTPN13-205ENST00000502971 CNGB1Q14028 1251 aaPredicted RBP29.96■■■□□ 2.39
PTPN13-205ENST00000502971 PUS7Q96PZ0 661 aaKnown RBP29.92■■■□□ 2.38
PTPN13-205ENST00000502971 YTHDC2Q9H6S0 1430 aaKnown RBP29.92■■■□□ 2.38
PTPN13-205ENST00000502971 BRD4O60885 1362 aaPredicted RBP29.92■■■□□ 2.38
PTPN13-205ENST00000502971 THEMISQ8N1K5 641 aaPredicted RBP29.91■■■□□ 2.38
PTPN13-205ENST00000502971 GTF3C3Q9Y5Q9 886 aa29.91■■■□□ 2.38
PTPN13-205ENST00000502971 KNSTRNQ9Y448 316 aa29.9■■■□□ 2.38
PTPN13-205ENST00000502971 CEP170BQ9Y4F5 1589 aaPredicted RBP29.89■■■□□ 2.38
PTPN13-205ENST00000502971 TMEM2Q9UHN6 1383 aa29.89■■■□□ 2.38
PTPN13-205ENST00000502971 FAM9BQ8IZU0 186 aa29.88■■■□□ 2.37
PTPN13-205ENST00000502971 ZNF142P52746 1687 aaPredicted RBP29.88■■■□□ 2.37
PTPN13-205ENST00000502971 TMC1Q8TDI8 760 aa29.87■■■□□ 2.37
PTPN13-205ENST00000502971 EVC2Q86UK5 1308 aa29.86■■■□□ 2.37
PTPN13-205ENST00000502971 SETD1AO15047 1707 aaKnown RBP29.86■■■□□ 2.37
PTPN13-205ENST00000502971 HNRNPUQ00839 825 aaKnown RBP eCLIP29.86■■■□□ 2.37
PTPN13-205ENST00000502971 STK26Q9P289 416 aa29.85■■■□□ 2.37
PTPN13-205ENST00000502971 NPC1L1Q9UHC9 1359 aa29.85■■■□□ 2.37
PTPN13-205ENST00000502971 NLRP13Q86W25 1043 aa29.85■■■□□ 2.37
PTPN13-205ENST00000502971 CC2D1BQ5T0F9 858 aaKnown RBP29.84■■■□□ 2.37
PTPN13-205ENST00000502971 SLIT1O75093 1534 aa29.84■■■□□ 2.37
PTPN13-205ENST00000502971 NRXN3Q9Y4C0 1643 aa29.83■■■□□ 2.37
PTPN13-205ENST00000502971 SENP3Q9H4L4 574 aaPredicted RBP29.82■■■□□ 2.36
PTPN13-205ENST00000502971 DLC1Q96QB1 1528 aa29.82■■■□□ 2.36
PTPN13-205ENST00000502971 ARHGAP23Q9P227 1491 aa29.82■■■□□ 2.36
PTPN13-205ENST00000502971 AMER1Q5JTC6 1135 aaPredicted RBP29.82■■■□□ 2.36
PTPN13-205ENST00000502971 LRPPRCP42704 1394 aaKnown RBP29.81■■■□□ 2.36
PTPN13-205ENST00000502971 TULP4Q9NRJ4 1543 aa29.81■■■□□ 2.36
PTPN13-205ENST00000502971 PNISRQ8TF01 805 aaKnown RBP29.8■■■□□ 2.36
PTPN13-205ENST00000502971 EID1Q9Y6B2 187 aa29.79■■■□□ 2.36
PTPN13-205ENST00000502971 POGKQ9P215 609 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 308.4 ms