RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 ADGRF5Q8IZF2 1346 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 MROH2AA6NES4 1674 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 AGLP35573 1532 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 IDI1Q13907 227 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
CPNE4-202ENST00000502818 REREQ9P2R6 1566 aa10.29□□□□□ -0.76
CPNE4-202ENST00000502818 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
CPNE4-202ENST00000502818 ARID4BQ4LE39 1312 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-202ENST00000502818 ST20-MTHFSA0A0A6YYL1 179 aa10.28□□□□□ -0.76
CPNE4-202ENST00000502818 ARHGAP31Q2M1Z3 1444 aa10.28□□□□□ -0.76
CPNE4-202ENST00000502818 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
CPNE4-202ENST00000502818 TRPM1Q7Z4N2 1603 aa10.27□□□□□ -0.77
CPNE4-202ENST00000502818 KIF7Q2M1P5 1343 aa10.27□□□□□ -0.77
CPNE4-202ENST00000502818 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
CPNE4-202ENST00000502818 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
CPNE4-202ENST00000502818 ADGRB3O60242 1522 aa10.26□□□□□ -0.77
CPNE4-202ENST00000502818 MADDQ8WXG6 1647 aa10.26□□□□□ -0.77
CPNE4-202ENST00000502818 CCDC7Q96M83 1385 aa10.25□□□□□ -0.77
CPNE4-202ENST00000502818 CENPBP07199 599 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-202ENST00000502818 ZC3H13Q5T200 1668 aaKnown RBP10.24□□□□□ -0.77
CPNE4-202ENST00000502818 ERVK-7P63135 1459 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 GPRASP1Q5JY77 1395 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-202ENST00000502818 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 PIK3C2BO00750 1634 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 POLR3GLQ9BT43 218 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 PREX1Q8TCU6 1659 aa10.24□□□□□ -0.77
CPNE4-202ENST00000502818 KIF1BO60333 1816 aa10.23□□□□□ -0.77
CPNE4-202ENST00000502818 PLPPR3Q6T4P5 718 aa10.23□□□□□ -0.77
CPNE4-202ENST00000502818 TESK2Q96S53 571 aa10.21□□□□□ -0.77
CPNE4-202ENST00000502818 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.78
CPNE4-202ENST00000502818 IFT172Q9UG01 1749 aa10.21□□□□□ -0.78
CPNE4-202ENST00000502818 NRXN1Q9ULB1 1477 aa10.21□□□□□ -0.78
CPNE4-202ENST00000502818 TMEM132EQ6IEE7 984 aa10.21□□□□□ -0.78
CPNE4-202ENST00000502818 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.78
CPNE4-202ENST00000502818 MYOM2P54296 1465 aa10.2□□□□□ -0.78
CPNE4-202ENST00000502818 SLC52A1Q9NWF4 448 aa10.2□□□□□ -0.78
CPNE4-202ENST00000502818 MYO5BQ9ULV0 1848 aa10.2□□□□□ -0.78
CPNE4-202ENST00000502818 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
CPNE4-202ENST00000502818 DISP3Q9P2K9 1392 aa10.19□□□□□ -0.78
CPNE4-202ENST00000502818 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
CPNE4-202ENST00000502818 TMEM131LA2VDJ0 1609 aa10.19□□□□□ -0.78
CPNE4-202ENST00000502818 SPATA31D1Q6ZQQ2 1576 aa10.19□□□□□ -0.78
CPNE4-202ENST00000502818 PPLO60437 1756 aa10.18□□□□□ -0.78
CPNE4-202ENST00000502818 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-202ENST00000502818 PIK3C2GO75747 1445 aa10.18□□□□□ -0.78
CPNE4-202ENST00000502818 C14orf93Q9H972 538 aaKnown RBP10.17□□□□□ -0.78
CPNE4-202ENST00000502818 RPGRIP1LQ68CZ1 1315 aa10.17□□□□□ -0.78
CPNE4-202ENST00000502818 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
CPNE4-202ENST00000502818 A2ML1A8K2U0 1454 aa10.16□□□□□ -0.78
CPNE4-202ENST00000502818 LAMC1P11047 1609 aa10.16□□□□□ -0.78
CPNE4-202ENST00000502818 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
CPNE4-202ENST00000502818 SCAF11Q99590 1463 aaKnown RBP10.16□□□□□ -0.78
CPNE4-202ENST00000502818 TRAK1Q9UPV9 953 aa10.15□□□□□ -0.78
CPNE4-202ENST00000502818 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
CPNE4-202ENST00000502818 TNRQ92752 1358 aa10.15□□□□□ -0.78
CPNE4-202ENST00000502818 CCDC184Q52MB2 194 aa10.15□□□□□ -0.79
CPNE4-202ENST00000502818 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
CPNE4-202ENST00000502818 VGFO15240 615 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-202ENST00000502818 ANP32CO43423 234 aa10.14□□□□□ -0.79
CPNE4-202ENST00000502818 ASXL1Q8IXJ9 1541 aa10.13□□□□□ -0.79
CPNE4-202ENST00000502818 STK26Q9P289 416 aa10.12□□□□□ -0.79
CPNE4-202ENST00000502818 POLR1AO95602 1720 aaPredicted RBP10.12□□□□□ -0.79
CPNE4-202ENST00000502818 KIAA1210Q9ULL0 1709 aa10.12□□□□□ -0.79
CPNE4-202ENST00000502818 RIMS2Q9UQ26 1411 aa10.12□□□□□ -0.79
CPNE4-202ENST00000502818 SAFB2Q14151 953 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPNE4-202ENST00000502818 ZFYVE9O95405 1425 aa10.1□□□□□ -0.79
CPNE4-202ENST00000502818 PTPRMP28827 1452 aa10.1□□□□□ -0.79
CPNE4-202ENST00000502818 C3P01024 1663 aa10.1□□□□□ -0.79
CPNE4-202ENST00000502818 LTKP29376 864 aa10.1□□□□□ -0.79
CPNE4-202ENST00000502818 TMF1P82094 1093 aa10.1□□□□□ -0.79
CPNE4-202ENST00000502818 PRKRIP1Q9H875 184 aaPredicted RBP10.1□□□□□ -0.79
CPNE4-202ENST00000502818 FER1L4A9Z1Z3 1794 aa10.09□□□□□ -0.79
CPNE4-202ENST00000502818 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
CPNE4-202ENST00000502818 HOXD11P31277 338 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-202ENST00000502818 PANK3Q9H999 370 aa10.08□□□□□ -0.8
CPNE4-202ENST00000502818 ALKQ9UM73 1620 aa10.08□□□□□ -0.8
CPNE4-202ENST00000502818 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-202ENST00000502818 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-202ENST00000502818 TMEM2Q9UHN6 1383 aa10.07□□□□□ -0.8
CPNE4-202ENST00000502818 METP08581 1390 aa10.06□□□□□ -0.8
CPNE4-202ENST00000502818 UBR1Q8IWV7 1749 aa10.06□□□□□ -0.8
CPNE4-202ENST00000502818 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
CPNE4-202ENST00000502818 EIF3AQ14152 1382 aaKnown RBP10.06□□□□□ -0.8
CPNE4-202ENST00000502818 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
CPNE4-202ENST00000502818 NRXN3Q9Y4C0 1643 aa10.06□□□□□ -0.8
CPNE4-202ENST00000502818 WAPLQ7Z5K2 1190 aa10.05□□□□□ -0.8
CPNE4-202ENST00000502818 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
CPNE4-202ENST00000502818 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
CPNE4-202ENST00000502818 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
CPNE4-202ENST00000502818 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
CPNE4-202ENST00000502818 TXNDC2Q86VQ3 553 aa10.04□□□□□ -0.8
CPNE4-202ENST00000502818 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
CPNE4-202ENST00000502818 NLRP1Q9C000 1473 aa10.04□□□□□ -0.8
CPNE4-202ENST00000502818 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-202ENST00000502818 CC2D1BQ5T0F9 858 aaKnown RBP10.03□□□□□ -0.8
CPNE4-202ENST00000502818 BCANQ96GW7 911 aa10.03□□□□□ -0.8
CPNE4-202ENST00000502818 SLC26A8Q96RN1 970 aa10.03□□□□□ -0.8
CPNE4-202ENST00000502818 ARHGEF28Q8N1W1 1705 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms