RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE2-204ENST00000502639 RGS20O76081 388 aa9.68□□□□□ -0.86
CDC42SE2-204ENST00000502639 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE2-204ENST00000502639 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
CDC42SE2-204ENST00000502639 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
CDC42SE2-204ENST00000502639 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
CDC42SE2-204ENST00000502639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-204ENST00000502639 GOLGA8CPA6NN73 597 aa9.65□□□□□ -0.86
CDC42SE2-204ENST00000502639 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
CDC42SE2-204ENST00000502639 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE2-204ENST00000502639 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
CDC42SE2-204ENST00000502639 MS4A1P11836 297 aa9.63□□□□□ -0.87
CDC42SE2-204ENST00000502639 DNAJB2P25686 324 aa9.63□□□□□ -0.87
CDC42SE2-204ENST00000502639 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-204ENST00000502639 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
CDC42SE2-204ENST00000502639 CLCN1P35523 988 aa9.62□□□□□ -0.87
CDC42SE2-204ENST00000502639 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
CDC42SE2-204ENST00000502639 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
CDC42SE2-204ENST00000502639 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE2-204ENST00000502639 DAXXQ9UER7 740 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE2-204ENST00000502639 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
CDC42SE2-204ENST00000502639 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
CDC42SE2-204ENST00000502639 FAM117AQ9C073 453 aa9.6□□□□□ -0.87
CDC42SE2-204ENST00000502639 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-204ENST00000502639 SAMD7Q7Z3H4 446 aa9.59□□□□□ -0.87
CDC42SE2-204ENST00000502639 PLEKHG3A1L390 1219 aa9.58□□□□□ -0.88
CDC42SE2-204ENST00000502639 BCAMP50895 628 aa9.57□□□□□ -0.88
CDC42SE2-204ENST00000502639 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE2-204ENST00000502639 SLC10A3P09131 477 aa9.55□□□□□ -0.88
CDC42SE2-204ENST00000502639 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
CDC42SE2-204ENST00000502639 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
CDC42SE2-204ENST00000502639 CD46P15529 392 aa9.53□□□□□ -0.88
CDC42SE2-204ENST00000502639 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
CDC42SE2-204ENST00000502639 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
CDC42SE2-204ENST00000502639 SOWAHBA6NEL2 793 aa9.5□□□□□ -0.89
CDC42SE2-204ENST00000502639 SULF1Q8IWU6 871 aa9.49□□□□□ -0.89
CDC42SE2-204ENST00000502639 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
CDC42SE2-204ENST00000502639 WBP1LQ9NX94 342 aa9.49□□□□□ -0.89
CDC42SE2-204ENST00000502639 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-204ENST00000502639 HDGFP51858 240 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-204ENST00000502639 Q6ZNB5 142 aa9.48□□□□□ -0.89
CDC42SE2-204ENST00000502639 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
CDC42SE2-204ENST00000502639 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
CDC42SE2-204ENST00000502639 LCE2BO14633 110 aa9.47□□□□□ -0.89
CDC42SE2-204ENST00000502639 GCGRP47871 477 aa9.47□□□□□ -0.89
CDC42SE2-204ENST00000502639 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
CDC42SE2-204ENST00000502639 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
CDC42SE2-204ENST00000502639 RNF40O75150 1001 aa9.45□□□□□ -0.9
CDC42SE2-204ENST00000502639 SPIRE2Q8WWL2 714 aa9.45□□□□□ -0.9
CDC42SE2-204ENST00000502639 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
CDC42SE2-204ENST00000502639 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
CDC42SE2-204ENST00000502639 CFHP08603 1231 aa9.43□□□□□ -0.9
CDC42SE2-204ENST00000502639 KCNC4Q03721 635 aa9.43□□□□□ -0.9
CDC42SE2-204ENST00000502639 APLP1P51693 650 aa9.42□□□□□ -0.9
CDC42SE2-204ENST00000502639 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
CDC42SE2-204ENST00000502639 TSR3Q9UJK0 312 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-204ENST00000502639 KDM4AO75164 1064 aa9.41□□□□□ -0.9
CDC42SE2-204ENST00000502639 PPP4CP60510 307 aa9.41□□□□□ -0.9
CDC42SE2-204ENST00000502639 FUT2Q10981 343 aa9.4□□□□□ -0.9
CDC42SE2-204ENST00000502639 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.9
CDC42SE2-204ENST00000502639 HLA-CQ95604 372 aa9.4□□□□□ -0.9
CDC42SE2-204ENST00000502639 MOXD2PA6NHM9 499 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 NDUFV2P19404 249 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
CDC42SE2-204ENST00000502639 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
CDC42SE2-204ENST00000502639 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-204ENST00000502639 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
CDC42SE2-204ENST00000502639 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
CDC42SE2-204ENST00000502639 HOXA2O43364 376 aa9.37□□□□□ -0.91
CDC42SE2-204ENST00000502639 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
CDC42SE2-204ENST00000502639 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-204ENST00000502639 SPTLC1O15269 473 aa9.36□□□□□ -0.91
CDC42SE2-204ENST00000502639 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE2-204ENST00000502639 RSPH6AQ9H0K4 717 aa9.36□□□□□ -0.91
CDC42SE2-204ENST00000502639 PCDHGC3Q9UN70 934 aa9.36□□□□□ -0.91
CDC42SE2-204ENST00000502639 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CDC42SE2-204ENST00000502639 USP46P62068 366 aa9.35□□□□□ -0.91
CDC42SE2-204ENST00000502639 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
CDC42SE2-204ENST00000502639 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
CDC42SE2-204ENST00000502639 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
CDC42SE2-204ENST00000502639 MORN1Q5T089 497 aa9.34□□□□□ -0.91
CDC42SE2-204ENST00000502639 GFRA3O60609 400 aa9.33□□□□□ -0.92
CDC42SE2-204ENST00000502639 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
CDC42SE2-204ENST00000502639 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
CDC42SE2-204ENST00000502639 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
CDC42SE2-204ENST00000502639 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42SE2-204ENST00000502639 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
CDC42SE2-204ENST00000502639 GJA5P36382 358 aa9.31□□□□□ -0.92
CDC42SE2-204ENST00000502639 QPCTQ16769 361 aa9.31□□□□□ -0.92
CDC42SE2-204ENST00000502639 TRAF7Q6Q0C0 670 aa9.31□□□□□ -0.92
CDC42SE2-204ENST00000502639 BLOC1S3Q6QNY0 202 aa9.31□□□□□ -0.92
CDC42SE2-204ENST00000502639 SLC27A5Q9Y2P5 690 aa9.31□□□□□ -0.92
CDC42SE2-204ENST00000502639 FDX1P10109 184 aa9.3□□□□□ -0.92
CDC42SE2-204ENST00000502639 TUSC1Q2TAM9 212 aa9.3□□□□□ -0.92
CDC42SE2-204ENST00000502639 TJAP1Q5JTD0 557 aa9.3□□□□□ -0.92
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