RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
NEDD4-203ENST00000502612 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
NEDD4-203ENST00000502612 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
NEDD4-203ENST00000502612 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
NEDD4-203ENST00000502612 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
NEDD4-203ENST00000502612 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
NEDD4-203ENST00000502612 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
NEDD4-203ENST00000502612 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
NEDD4-203ENST00000502612 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
NEDD4-203ENST00000502612 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
NEDD4-203ENST00000502612 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
NEDD4-203ENST00000502612 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
NEDD4-203ENST00000502612 LIMD1Q9UGP4 676 aa12.77□□□□□ -0.37
NEDD4-203ENST00000502612 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
NEDD4-203ENST00000502612 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
NEDD4-203ENST00000502612 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
NEDD4-203ENST00000502612 SLC10A3P09131 477 aa12.75□□□□□ -0.37
NEDD4-203ENST00000502612 CLK2P49760 499 aaKnown RBP12.75□□□□□ -0.37
NEDD4-203ENST00000502612 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
NEDD4-203ENST00000502612 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
NEDD4-203ENST00000502612 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEDD4-203ENST00000502612 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
NEDD4-203ENST00000502612 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEDD4-203ENST00000502612 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
NEDD4-203ENST00000502612 NDUFV2P19404 249 aa12.72□□□□□ -0.37
NEDD4-203ENST00000502612 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
NEDD4-203ENST00000502612 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
NEDD4-203ENST00000502612 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
NEDD4-203ENST00000502612 TK2O00142 265 aa12.7□□□□□ -0.38
NEDD4-203ENST00000502612 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
NEDD4-203ENST00000502612 GCGRP47871 477 aa12.69□□□□□ -0.38
NEDD4-203ENST00000502612 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
NEDD4-203ENST00000502612 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
NEDD4-203ENST00000502612 RNF40O75150 1001 aa12.68□□□□□ -0.38
NEDD4-203ENST00000502612 KDM4AO75164 1064 aa12.68□□□□□ -0.38
NEDD4-203ENST00000502612 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
NEDD4-203ENST00000502612 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
NEDD4-203ENST00000502612 HLA-CQ95604 372 aa12.68□□□□□ -0.38
NEDD4-203ENST00000502612 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
NEDD4-203ENST00000502612 HRO43593 1189 aa12.67□□□□□ -0.38
NEDD4-203ENST00000502612 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
NEDD4-203ENST00000502612 SPTLC1O15269 473 aa12.66□□□□□ -0.38
NEDD4-203ENST00000502612 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
NEDD4-203ENST00000502612 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
NEDD4-203ENST00000502612 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
NEDD4-203ENST00000502612 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
NEDD4-203ENST00000502612 HOXA2O43364 376 aa12.64□□□□□ -0.39
NEDD4-203ENST00000502612 QPCTQ16769 361 aa12.64□□□□□ -0.39
NEDD4-203ENST00000502612 CFHP08603 1231 aa12.63□□□□□ -0.39
NEDD4-203ENST00000502612 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
NEDD4-203ENST00000502612 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
NEDD4-203ENST00000502612 RFC5P40937 340 aa12.62□□□□□ -0.39
NEDD4-203ENST00000502612 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
NEDD4-203ENST00000502612 MCM6Q14566 821 aa12.61□□□□□ -0.39
NEDD4-203ENST00000502612 CABLES1Q8TDN4 633 aa12.61□□□□□ -0.39
NEDD4-203ENST00000502612 FUT2Q10981 343 aa12.6□□□□□ -0.39
NEDD4-203ENST00000502612 FLIIQ13045 1269 aa12.6□□□□□ -0.39
NEDD4-203ENST00000502612 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
NEDD4-203ENST00000502612 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
NEDD4-203ENST00000502612 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
NEDD4-203ENST00000502612 ZMYND15Q9H091 742 aa12.59□□□□□ -0.39
NEDD4-203ENST00000502612 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
NEDD4-203ENST00000502612 USP46P62068 366 aa12.58□□□□□ -0.4
NEDD4-203ENST00000502612 TUSC1Q2TAM9 212 aa12.58□□□□□ -0.4
NEDD4-203ENST00000502612 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
NEDD4-203ENST00000502612 PPP2R2DQ66LE6 453 aa12.58□□□□□ -0.4
NEDD4-203ENST00000502612 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
NEDD4-203ENST00000502612 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
NEDD4-203ENST00000502612 LILRB3O75022 631 aa12.57□□□□□ -0.4
NEDD4-203ENST00000502612 FDX1P10109 184 aa12.57□□□□□ -0.4
NEDD4-203ENST00000502612 BCAMP50895 628 aa12.56□□□□□ -0.4
NEDD4-203ENST00000502612 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
NEDD4-203ENST00000502612 GJA5P36382 358 aa12.55□□□□□ -0.4
NEDD4-203ENST00000502612 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
NEDD4-203ENST00000502612 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
NEDD4-203ENST00000502612 HRCP23327 699 aa12.54□□□□□ -0.4
NEDD4-203ENST00000502612 ANKK1Q8NFD2 765 aa12.53□□□□□ -0.4
NEDD4-203ENST00000502612 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
NEDD4-203ENST00000502612 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
NEDD4-203ENST00000502612 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
NEDD4-203ENST00000502612 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.41
NEDD4-203ENST00000502612 NUTM2DQ5VT03 806 aaPredicted RBP12.52□□□□□ -0.41
NEDD4-203ENST00000502612 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
NEDD4-203ENST00000502612 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
NEDD4-203ENST00000502612 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
NEDD4-203ENST00000502612 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
NEDD4-203ENST00000502612 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
NEDD4-203ENST00000502612 KMT5BQ4FZB7 885 aa12.5□□□□□ -0.41
NEDD4-203ENST00000502612 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
NEDD4-203ENST00000502612 WNT2BQ93097 391 aa12.5□□□□□ -0.41
NEDD4-203ENST00000502612 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
NEDD4-203ENST00000502612 AP1G2O75843 785 aa12.49□□□□□ -0.41
NEDD4-203ENST00000502612 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
NEDD4-203ENST00000502612 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
NEDD4-203ENST00000502612 APLP1P51693 650 aa12.48□□□□□ -0.41
NEDD4-203ENST00000502612 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
NEDD4-203ENST00000502612 BANK1Q8NDB2 785 aa12.48□□□□□ -0.41
NEDD4-203ENST00000502612 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
NEDD4-203ENST00000502612 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
NEDD4-203ENST00000502612 MORN1Q5T089 497 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms