RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
UBE2D3-212ENST00000502563 EID1Q9Y6B2 187 aa15.87■□□□□ 0.13
UBE2D3-212ENST00000502563 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
UBE2D3-212ENST00000502563 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
UBE2D3-212ENST00000502563 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE2D3-212ENST00000502563 KIF1BO60333 1816 aa15.86■□□□□ 0.13
UBE2D3-212ENST00000502563 NCKAP5LQ9HCH0 1330 aa15.85■□□□□ 0.13
UBE2D3-212ENST00000502563 LTKP29376 864 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 RPGRIP1LQ68CZ1 1315 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 RIMS2Q9UQ26 1411 aa15.84■□□□□ 0.13
UBE2D3-212ENST00000502563 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.12
UBE2D3-212ENST00000502563 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
UBE2D3-212ENST00000502563 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
UBE2D3-212ENST00000502563 IQSEC2Q5JU85 1478 aa15.81■□□□□ 0.12
UBE2D3-212ENST00000502563 NEXMIFQ5QGS0 1516 aa15.81■□□□□ 0.12
UBE2D3-212ENST00000502563 LTBP4Q8N2S1 1624 aa15.8■□□□□ 0.12
UBE2D3-212ENST00000502563 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
UBE2D3-212ENST00000502563 CPS1P31327 1500 aa15.78■□□□□ 0.12
UBE2D3-212ENST00000502563 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
UBE2D3-212ENST00000502563 STAC3Q96MF2 364 aa15.77■□□□□ 0.12
UBE2D3-212ENST00000502563 PPLO60437 1756 aa15.75■□□□□ 0.11
UBE2D3-212ENST00000502563 VGFO15240 615 aaPredicted RBP15.75■□□□□ 0.11
UBE2D3-212ENST00000502563 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
UBE2D3-212ENST00000502563 TBX22Q9Y458 520 aa15.75■□□□□ 0.11
UBE2D3-212ENST00000502563 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
UBE2D3-212ENST00000502563 NWD1Q149M9 1564 aa15.74■□□□□ 0.11
UBE2D3-212ENST00000502563 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
UBE2D3-212ENST00000502563 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
UBE2D3-212ENST00000502563 PPP1R15AO75807 674 aaPredicted RBP15.73■□□□□ 0.11
UBE2D3-212ENST00000502563 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
UBE2D3-212ENST00000502563 MYOM2P54296 1465 aa15.72■□□□□ 0.11
UBE2D3-212ENST00000502563 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
UBE2D3-212ENST00000502563 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-212ENST00000502563 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.11
UBE2D3-212ENST00000502563 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.11
UBE2D3-212ENST00000502563 DHX57Q6P158 1386 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-212ENST00000502563 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
UBE2D3-212ENST00000502563 KCNA6P17658 529 aa15.69■□□□□ 0.1
UBE2D3-212ENST00000502563 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
UBE2D3-212ENST00000502563 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
UBE2D3-212ENST00000502563 CHD2O14647 1828 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-212ENST00000502563 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
UBE2D3-212ENST00000502563 SETD1AO15047 1707 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-212ENST00000502563 STRCP1A6NGW2 1772 aa15.66■□□□□ 0.1
UBE2D3-212ENST00000502563 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
UBE2D3-212ENST00000502563 SLC26A8Q96RN1 970 aa15.65■□□□□ 0.1
UBE2D3-212ENST00000502563 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
UBE2D3-212ENST00000502563 LAMC1P11047 1609 aa15.65■□□□□ 0.1
UBE2D3-212ENST00000502563 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
UBE2D3-212ENST00000502563 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-212ENST00000502563 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
UBE2D3-212ENST00000502563 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
UBE2D3-212ENST00000502563 ADGRF5Q8IZF2 1346 aa15.61■□□□□ 0.09
UBE2D3-212ENST00000502563 TECPR2O15040 1411 aa15.6■□□□□ 0.09
UBE2D3-212ENST00000502563 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
UBE2D3-212ENST00000502563 BCANQ96GW7 911 aa15.6■□□□□ 0.09
UBE2D3-212ENST00000502563 METP08581 1390 aa15.6■□□□□ 0.09
UBE2D3-212ENST00000502563 PTPRUQ92729 1446 aa15.6■□□□□ 0.09
UBE2D3-212ENST00000502563 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
UBE2D3-212ENST00000502563 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
UBE2D3-212ENST00000502563 C14orf93Q9H972 538 aaKnown RBP15.58■□□□□ 0.08
UBE2D3-212ENST00000502563 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
UBE2D3-212ENST00000502563 AMOTL2Q9Y2J4 779 aa15.56■□□□□ 0.08
UBE2D3-212ENST00000502563 ABCC11Q96J66 1382 aa15.56■□□□□ 0.08
UBE2D3-212ENST00000502563 DCCP43146 1447 aa15.56■□□□□ 0.08
UBE2D3-212ENST00000502563 KNDC1Q76NI1 1749 aa15.56■□□□□ 0.08
UBE2D3-212ENST00000502563 KIAA1210Q9ULL0 1709 aa15.56■□□□□ 0.08
UBE2D3-212ENST00000502563 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
UBE2D3-212ENST00000502563 TMEM94Q12767 1356 aa15.55■□□□□ 0.08
UBE2D3-212ENST00000502563 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
UBE2D3-212ENST00000502563 DCAF11Q8TEB1 546 aa15.55■□□□□ 0.08
UBE2D3-212ENST00000502563 SIRT1Q96EB6 747 aa15.55■□□□□ 0.08
UBE2D3-212ENST00000502563 LRPPRCP42704 1394 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-212ENST00000502563 ADGRB1O14514 1584 aa15.53■□□□□ 0.08
UBE2D3-212ENST00000502563 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
UBE2D3-212ENST00000502563 FAM135BQ49AJ0 1406 aa15.52■□□□□ 0.08
UBE2D3-212ENST00000502563 PROSER2Q86WR7 435 aaPredicted RBP15.52■□□□□ 0.08
UBE2D3-212ENST00000502563 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
UBE2D3-212ENST00000502563 TOM1O60784 492 aa15.51■□□□□ 0.07
UBE2D3-212ENST00000502563 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-212ENST00000502563 MSH6P52701 1360 aa15.5■□□□□ 0.07
UBE2D3-212ENST00000502563 ADGRL3Q9HAR2 1447 aa15.5■□□□□ 0.07
UBE2D3-212ENST00000502563 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
UBE2D3-212ENST00000502563 L3MBTL2Q969R5 705 aa15.49■□□□□ 0.07
UBE2D3-212ENST00000502563 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
UBE2D3-212ENST00000502563 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
UBE2D3-212ENST00000502563 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
UBE2D3-212ENST00000502563 ROBO2Q9HCK4 1378 aa15.48■□□□□ 0.07
UBE2D3-212ENST00000502563 CADPS2Q86UW7 1296 aa15.46■□□□□ 0.07
UBE2D3-212ENST00000502563 TONSLQ96HA7 1378 aa15.46■□□□□ 0.07
UBE2D3-212ENST00000502563 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
UBE2D3-212ENST00000502563 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
UBE2D3-212ENST00000502563 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.45■□□□□ 0.06
UBE2D3-212ENST00000502563 UBAP1LF5GYI3 381 aa15.44■□□□□ 0.06
UBE2D3-212ENST00000502563 CDC42BPGQ6DT37 1551 aa15.44■□□□□ 0.06
UBE2D3-212ENST00000502563 NALCNQ8IZF0 1738 aa15.43■□□□□ 0.06
UBE2D3-212ENST00000502563 GPRASP1Q5JY77 1395 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms