RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.92
RNF4-202ENST00000502316 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
RNF4-202ENST00000502316 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
RNF4-202ENST00000502316 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
RNF4-202ENST00000502316 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
RNF4-202ENST00000502316 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
RNF4-202ENST00000502316 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
RNF4-202ENST00000502316 HDGFP51858 240 aaKnown RBP20.74■□□□□ 0.91
RNF4-202ENST00000502316 RPGRIP1LQ68CZ1 1315 aa20.74■□□□□ 0.91
RNF4-202ENST00000502316 ZNF326Q5BKZ1 582 aaKnown RBP20.73■□□□□ 0.91
RNF4-202ENST00000502316 PPLO60437 1756 aa20.72■□□□□ 0.91
RNF4-202ENST00000502316 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
RNF4-202ENST00000502316 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
RNF4-202ENST00000502316 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
RNF4-202ENST00000502316 RGL3Q3MIN7 710 aa20.67■□□□□ 0.9
RNF4-202ENST00000502316 SETBP1Q9Y6X0 1596 aa20.67■□□□□ 0.9
RNF4-202ENST00000502316 NUTM2DQ5VT03 806 aaPredicted RBP20.66■□□□□ 0.9
RNF4-202ENST00000502316 VGFO15240 615 aaPredicted RBP20.65■□□□□ 0.9
RNF4-202ENST00000502316 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.9
RNF4-202ENST00000502316 DIP2AQ14689 1571 aa20.64■□□□□ 0.9
RNF4-202ENST00000502316 MYOM2P54296 1465 aa20.64■□□□□ 0.89
RNF4-202ENST00000502316 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
RNF4-202ENST00000502316 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
RNF4-202ENST00000502316 NRXN1Q9ULB1 1477 aa20.62■□□□□ 0.89
RNF4-202ENST00000502316 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
RNF4-202ENST00000502316 ADGRF5Q8IZF2 1346 aa20.59■□□□□ 0.89
RNF4-202ENST00000502316 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
RNF4-202ENST00000502316 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
RNF4-202ENST00000502316 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
RNF4-202ENST00000502316 PIK3C2GO75747 1445 aa20.59■□□□□ 0.89
RNF4-202ENST00000502316 LTBP4Q8N2S1 1624 aa20.57■□□□□ 0.88
RNF4-202ENST00000502316 BCANQ96GW7 911 aa20.57■□□□□ 0.88
RNF4-202ENST00000502316 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
RNF4-202ENST00000502316 SETD1AO15047 1707 aaKnown RBP20.56■□□□□ 0.88
RNF4-202ENST00000502316 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
RNF4-202ENST00000502316 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
RNF4-202ENST00000502316 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
RNF4-202ENST00000502316 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
RNF4-202ENST00000502316 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
RNF4-202ENST00000502316 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
RNF4-202ENST00000502316 STRCP1A6NGW2 1772 aa20.53■□□□□ 0.88
RNF4-202ENST00000502316 CPS1P31327 1500 aa20.53■□□□□ 0.88
RNF4-202ENST00000502316 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
RNF4-202ENST00000502316 LAMC1P11047 1609 aa20.52■□□□□ 0.88
RNF4-202ENST00000502316 L3MBTL2Q969R5 705 aa20.51■□□□□ 0.87
RNF4-202ENST00000502316 METP08581 1390 aa20.5■□□□□ 0.87
RNF4-202ENST00000502316 KCNA6P17658 529 aa20.5■□□□□ 0.87
RNF4-202ENST00000502316 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
RNF4-202ENST00000502316 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
RNF4-202ENST00000502316 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
RNF4-202ENST00000502316 XRN1Q8IZH2 1706 aaKnown RBP20.48■□□□□ 0.87
RNF4-202ENST00000502316 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
RNF4-202ENST00000502316 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
RNF4-202ENST00000502316 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
RNF4-202ENST00000502316 PRAG1Q86YV5 1406 aa20.47■□□□□ 0.87
RNF4-202ENST00000502316 ASXL1Q8IXJ9 1541 aa20.47■□□□□ 0.87
RNF4-202ENST00000502316 LRRC7Q96NW7 1537 aa20.44■□□□□ 0.86
RNF4-202ENST00000502316 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
RNF4-202ENST00000502316 IQSEC2Q5JU85 1478 aa20.43■□□□□ 0.86
RNF4-202ENST00000502316 ADGRB1O14514 1584 aa20.43■□□□□ 0.86
RNF4-202ENST00000502316 CFAP70Q5T0N1 1121 aa20.43■□□□□ 0.86
RNF4-202ENST00000502316 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
RNF4-202ENST00000502316 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
RNF4-202ENST00000502316 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
RNF4-202ENST00000502316 TECPR2O15040 1411 aa20.41■□□□□ 0.86
RNF4-202ENST00000502316 PTCH1Q13635 1447 aa20.41■□□□□ 0.86
RNF4-202ENST00000502316 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.86
RNF4-202ENST00000502316 LRPPRCP42704 1394 aaKnown RBP20.39■□□□□ 0.85
RNF4-202ENST00000502316 YTHDC2Q9H6S0 1430 aaKnown RBP20.38■□□□□ 0.85
RNF4-202ENST00000502316 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
RNF4-202ENST00000502316 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
RNF4-202ENST00000502316 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
RNF4-202ENST00000502316 TMEM94Q12767 1356 aa20.37■□□□□ 0.85
RNF4-202ENST00000502316 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
RNF4-202ENST00000502316 TRPM1Q7Z4N2 1603 aa20.37■□□□□ 0.85
RNF4-202ENST00000502316 PROSER2Q86WR7 435 aaPredicted RBP20.36■□□□□ 0.85
RNF4-202ENST00000502316 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
RNF4-202ENST00000502316 DLC1Q96QB1 1528 aa20.33■□□□□ 0.85
RNF4-202ENST00000502316 NBPF8Q3BBV2 869 aa20.33■□□□□ 0.85
RNF4-202ENST00000502316 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
RNF4-202ENST00000502316 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
RNF4-202ENST00000502316 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
RNF4-202ENST00000502316 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
RNF4-202ENST00000502316 STK26Q9P289 416 aa20.3■□□□□ 0.84
RNF4-202ENST00000502316 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
RNF4-202ENST00000502316 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
RNF4-202ENST00000502316 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
RNF4-202ENST00000502316 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
RNF4-202ENST00000502316 NALCNQ8IZF0 1738 aa20.27■□□□□ 0.83
RNF4-202ENST00000502316 MSH6P52701 1360 aa20.26■□□□□ 0.83
RNF4-202ENST00000502316 ARHGEF28Q8N1W1 1705 aaKnown RBP20.26■□□□□ 0.83
RNF4-202ENST00000502316 DCCP43146 1447 aa20.26■□□□□ 0.83
RNF4-202ENST00000502316 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
RNF4-202ENST00000502316 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.24■□□□□ 0.83
RNF4-202ENST00000502316 WAPLQ7Z5K2 1190 aa20.24■□□□□ 0.83
RNF4-202ENST00000502316 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
RNF4-202ENST00000502316 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
RNF4-202ENST00000502316 PRAM1Q96QH2 718 aa20.22■□□□□ 0.83
RNF4-202ENST00000502316 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
RNF4-202ENST00000502316 CDC42BPGQ6DT37 1551 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms