RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
CRNDE-202ENST00000502066 PTPRTO14522 1441 aa13.23□□□□□ -0.29
CRNDE-202ENST00000502066 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
CRNDE-202ENST00000502066 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
CRNDE-202ENST00000502066 THSD4Q6ZMP0 1018 aa13.22□□□□□ -0.29
CRNDE-202ENST00000502066 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
CRNDE-202ENST00000502066 WNT2BQ93097 391 aa13.22□□□□□ -0.29
CRNDE-202ENST00000502066 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
CRNDE-202ENST00000502066 PLB1Q6P1J6 1458 aa13.19□□□□□ -0.3
CRNDE-202ENST00000502066 MFSD10Q14728 455 aa13.18□□□□□ -0.3
CRNDE-202ENST00000502066 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
CRNDE-202ENST00000502066 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
CRNDE-202ENST00000502066 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
CRNDE-202ENST00000502066 PROX2Q3B8N5 592 aa13.16□□□□□ -0.3
CRNDE-202ENST00000502066 COL9A1P20849 921 aa13.15□□□□□ -0.3
CRNDE-202ENST00000502066 CFAP43Q8NDM7 1665 aa13.15□□□□□ -0.31
CRNDE-202ENST00000502066 PIP4K2BP78356 416 aa13.14□□□□□ -0.31
CRNDE-202ENST00000502066 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
CRNDE-202ENST00000502066 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
CRNDE-202ENST00000502066 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
CRNDE-202ENST00000502066 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
CRNDE-202ENST00000502066 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
CRNDE-202ENST00000502066 PPP1R3GB7ZBB8 358 aa13.09□□□□□ -0.31
CRNDE-202ENST00000502066 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
CRNDE-202ENST00000502066 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
CRNDE-202ENST00000502066 CUL7Q14999 1698 aa13.05□□□□□ -0.32
CRNDE-202ENST00000502066 BCAMP50895 628 aa13.05□□□□□ -0.32
CRNDE-202ENST00000502066 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
CRNDE-202ENST00000502066 DPYSL4O14531 572 aa13.04□□□□□ -0.32
CRNDE-202ENST00000502066 PHF14O94880 888 aa13.04□□□□□ -0.32
CRNDE-202ENST00000502066 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
CRNDE-202ENST00000502066 PREX1Q8TCU6 1659 aa13.04□□□□□ -0.32
CRNDE-202ENST00000502066 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
CRNDE-202ENST00000502066 A0A0G2JS52 829 aa13.02□□□□□ -0.33
CRNDE-202ENST00000502066 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
CRNDE-202ENST00000502066 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
CRNDE-202ENST00000502066 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
CRNDE-202ENST00000502066 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.33
CRNDE-202ENST00000502066 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
CRNDE-202ENST00000502066 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
CRNDE-202ENST00000502066 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
CRNDE-202ENST00000502066 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
CRNDE-202ENST00000502066 DDX12PQ92771 950 aa12.98□□□□□ -0.33
CRNDE-202ENST00000502066 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
CRNDE-202ENST00000502066 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
CRNDE-202ENST00000502066 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
CRNDE-202ENST00000502066 SOWAHBA6NEL2 793 aa12.95□□□□□ -0.34
CRNDE-202ENST00000502066 TOM1O60784 492 aa12.95□□□□□ -0.34
CRNDE-202ENST00000502066 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
CRNDE-202ENST00000502066 EPAS1Q99814 870 aa12.94□□□□□ -0.34
CRNDE-202ENST00000502066 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
CRNDE-202ENST00000502066 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
CRNDE-202ENST00000502066 RGS20O76081 388 aa12.93□□□□□ -0.34
CRNDE-202ENST00000502066 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
CRNDE-202ENST00000502066 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
CRNDE-202ENST00000502066 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
CRNDE-202ENST00000502066 PTPRGP23470 1445 aa12.91□□□□□ -0.34
CRNDE-202ENST00000502066 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
CRNDE-202ENST00000502066 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
CRNDE-202ENST00000502066 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
CRNDE-202ENST00000502066 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
CRNDE-202ENST00000502066 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
CRNDE-202ENST00000502066 CEBPAP49715 358 aaPredicted RBP12.88□□□□□ -0.35
CRNDE-202ENST00000502066 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
CRNDE-202ENST00000502066 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
CRNDE-202ENST00000502066 TSR1Q2NL82 804 aaKnown RBP12.87□□□□□ -0.35
CRNDE-202ENST00000502066 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
CRNDE-202ENST00000502066 NBR1Q14596 966 aa12.86□□□□□ -0.35
CRNDE-202ENST00000502066 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
CRNDE-202ENST00000502066 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
CRNDE-202ENST00000502066 MLECQ14165 292 aa12.85□□□□□ -0.35
CRNDE-202ENST00000502066 MAP3K7O43318 606 aa12.84□□□□□ -0.35
CRNDE-202ENST00000502066 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CRNDE-202ENST00000502066 CUX1P39880 1505 aa12.83□□□□□ -0.35
CRNDE-202ENST00000502066 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
CRNDE-202ENST00000502066 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
CRNDE-202ENST00000502066 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
CRNDE-202ENST00000502066 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
CRNDE-202ENST00000502066 POGZQ7Z3K3 1410 aa12.81□□□□□ -0.36
CRNDE-202ENST00000502066 KCNC4Q03721 635 aa12.81□□□□□ -0.36
CRNDE-202ENST00000502066 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
CRNDE-202ENST00000502066 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
CRNDE-202ENST00000502066 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
CRNDE-202ENST00000502066 SMAPO00193 183 aa12.8□□□□□ -0.36
CRNDE-202ENST00000502066 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
CRNDE-202ENST00000502066 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CRNDE-202ENST00000502066 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
CRNDE-202ENST00000502066 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
CRNDE-202ENST00000502066 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
CRNDE-202ENST00000502066 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
CRNDE-202ENST00000502066 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
CRNDE-202ENST00000502066 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
CRNDE-202ENST00000502066 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
CRNDE-202ENST00000502066 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
CRNDE-202ENST00000502066 PDIA6Q15084 440 aa12.77□□□□□ -0.37
CRNDE-202ENST00000502066 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
CRNDE-202ENST00000502066 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
CRNDE-202ENST00000502066 SETD1BQ9UPS6 1966 aaKnown RBP12.76□□□□□ -0.37
CRNDE-202ENST00000502066 WDR7Q9Y4E6 1490 aa12.76□□□□□ -0.37
CRNDE-202ENST00000502066 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms