RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
CRNDE-201ENST00000501177 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
CRNDE-201ENST00000501177 RNF40O75150 1001 aa11.85□□□□□ -0.51
CRNDE-201ENST00000501177 TJAP1Q5JTD0 557 aa11.85□□□□□ -0.51
CRNDE-201ENST00000501177 APLP1P51693 650 aa11.84□□□□□ -0.51
CRNDE-201ENST00000501177 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
CRNDE-201ENST00000501177 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
CRNDE-201ENST00000501177 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
CRNDE-201ENST00000501177 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
CRNDE-201ENST00000501177 MTRQ99707 1265 aa11.81□□□□□ -0.52
CRNDE-201ENST00000501177 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
CRNDE-201ENST00000501177 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
CRNDE-201ENST00000501177 ZNF516Q92618 1163 aa11.78□□□□□ -0.52
CRNDE-201ENST00000501177 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
CRNDE-201ENST00000501177 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
CRNDE-201ENST00000501177 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
CRNDE-201ENST00000501177 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
CRNDE-201ENST00000501177 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
CRNDE-201ENST00000501177 FCHSD2O94868 740 aa11.74□□□□□ -0.53
CRNDE-201ENST00000501177 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
CRNDE-201ENST00000501177 WDR62O43379 1518 aa11.73□□□□□ -0.53
CRNDE-201ENST00000501177 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
CRNDE-201ENST00000501177 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
CRNDE-201ENST00000501177 DNAJB2P25686 324 aa11.72□□□□□ -0.53
CRNDE-201ENST00000501177 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
CRNDE-201ENST00000501177 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
CRNDE-201ENST00000501177 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
CRNDE-201ENST00000501177 COPS2P61201 443 aa11.71□□□□□ -0.53
CRNDE-201ENST00000501177 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
CRNDE-201ENST00000501177 GPR37O15354 613 aa11.68□□□□□ -0.54
CRNDE-201ENST00000501177 FECHP22830 423 aa11.68□□□□□ -0.54
CRNDE-201ENST00000501177 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
CRNDE-201ENST00000501177 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
CRNDE-201ENST00000501177 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
CRNDE-201ENST00000501177 HIC1Q14526 733 aa11.65□□□□□ -0.54
CRNDE-201ENST00000501177 PXYLP1Q8TE99 480 aa11.65□□□□□ -0.54
CRNDE-201ENST00000501177 SLC10A3P09131 477 aa11.64□□□□□ -0.55
CRNDE-201ENST00000501177 SLC4A3P48751 1232 aa11.63□□□□□ -0.55
CRNDE-201ENST00000501177 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
CRNDE-201ENST00000501177 PCDHB3Q9Y5E6 796 aa11.63□□□□□ -0.55
CRNDE-201ENST00000501177 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
CRNDE-201ENST00000501177 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
CRNDE-201ENST00000501177 ZPR1O75312 459 aa11.62□□□□□ -0.55
CRNDE-201ENST00000501177 METTL3Q86U44 580 aaKnown RBP11.62□□□□□ -0.55
CRNDE-201ENST00000501177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
CRNDE-201ENST00000501177 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
CRNDE-201ENST00000501177 PRKD2Q9BZL6 878 aa11.61□□□□□ -0.55
CRNDE-201ENST00000501177 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
CRNDE-201ENST00000501177 GNPATO15228 680 aa11.6□□□□□ -0.55
CRNDE-201ENST00000501177 CFHP08603 1231 aa11.6□□□□□ -0.55
CRNDE-201ENST00000501177 TLL1O43897 1013 aa11.59□□□□□ -0.55
CRNDE-201ENST00000501177 OATP04181 439 aa11.59□□□□□ -0.55
CRNDE-201ENST00000501177 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
CRNDE-201ENST00000501177 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
CRNDE-201ENST00000501177 NLRP7Q8WX94 980 aa11.58□□□□□ -0.56
CRNDE-201ENST00000501177 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
CRNDE-201ENST00000501177 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
CRNDE-201ENST00000501177 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
CRNDE-201ENST00000501177 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
CRNDE-201ENST00000501177 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
CRNDE-201ENST00000501177 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
CRNDE-201ENST00000501177 GPIHBP1Q8IV16 184 aa11.52□□□□□ -0.57
CRNDE-201ENST00000501177 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
CRNDE-201ENST00000501177 LCE2BO14633 110 aa11.51□□□□□ -0.57
CRNDE-201ENST00000501177 Q6ZNB5 142 aa11.51□□□□□ -0.57
CRNDE-201ENST00000501177 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
CRNDE-201ENST00000501177 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
CRNDE-201ENST00000501177 GFRA3O60609 400 aa11.5□□□□□ -0.57
CRNDE-201ENST00000501177 CFTRP13569 1480 aa11.5□□□□□ -0.57
CRNDE-201ENST00000501177 WIZO95785 1651 aa11.49□□□□□ -0.57
CRNDE-201ENST00000501177 GGCXP38435 758 aa11.49□□□□□ -0.57
CRNDE-201ENST00000501177 PUS10Q3MIT2 529 aaKnown RBP11.49□□□□□ -0.57
CRNDE-201ENST00000501177 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
CRNDE-201ENST00000501177 TMUB1Q9BVT8 246 aa11.49□□□□□ -0.57
CRNDE-201ENST00000501177 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
CRNDE-201ENST00000501177 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
CRNDE-201ENST00000501177 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
CRNDE-201ENST00000501177 S1PR4O95977 384 aa11.47□□□□□ -0.57
CRNDE-201ENST00000501177 ARHGEF11O15085 1522 aa11.46□□□□□ -0.57
CRNDE-201ENST00000501177 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
CRNDE-201ENST00000501177 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
CRNDE-201ENST00000501177 SCUBE3Q8IX30 993 aa11.45□□□□□ -0.58
CRNDE-201ENST00000501177 NR1I2O75469 434 aa11.44□□□□□ -0.58
CRNDE-201ENST00000501177 RDH13Q8NBN7 331 aa11.44□□□□□ -0.58
CRNDE-201ENST00000501177 ADH1BP00325 375 aa11.43□□□□□ -0.58
CRNDE-201ENST00000501177 LAPTM4AQ15012 233 aa11.43□□□□□ -0.58
CRNDE-201ENST00000501177 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
CRNDE-201ENST00000501177 NRG2O14511 850 aaPredicted RBP11.41□□□□□ -0.58
CRNDE-201ENST00000501177 FUT2Q10981 343 aa11.41□□□□□ -0.58
CRNDE-201ENST00000501177 SLC19A1P41440 591 aa11.4□□□□□ -0.58
CRNDE-201ENST00000501177 MORN1Q5T089 497 aa11.4□□□□□ -0.58
CRNDE-201ENST00000501177 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
CRNDE-201ENST00000501177 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
CRNDE-201ENST00000501177 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
CRNDE-201ENST00000501177 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
CRNDE-201ENST00000501177 LIAT1Q6ZQX7 453 aa11.39□□□□□ -0.59
CRNDE-201ENST00000501177 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
CRNDE-201ENST00000501177 GCGRP47871 477 aa11.38□□□□□ -0.59
CRNDE-201ENST00000501177 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
CRNDE-201ENST00000501177 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms