RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
MED28-202ENST00000499786 CROCC2H7BZ55 1655 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 ABCC10Q5T3U5 1492 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 E2F4Q16254 413 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 LHX8Q68G74 356 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 MYO5CQ9NQX4 1742 aa10.26□□□□□ -0.77
MED28-202ENST00000499786 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
MED28-202ENST00000499786 DAPK1P53355 1430 aa10.25□□□□□ -0.77
MED28-202ENST00000499786 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
MED28-202ENST00000499786 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
MED28-202ENST00000499786 DHX57Q6P158 1386 aaKnown RBP10.25□□□□□ -0.77
MED28-202ENST00000499786 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
MED28-202ENST00000499786 ACIN1Q9UKV3 1341 aaKnown RBP10.24□□□□□ -0.77
MED28-202ENST00000499786 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
MED28-202ENST00000499786 TTC37Q6PGP7 1564 aa10.23□□□□□ -0.77
MED28-202ENST00000499786 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
MED28-202ENST00000499786 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
MED28-202ENST00000499786 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
MED28-202ENST00000499786 SHANK2Q9UPX8 1470 aa10.22□□□□□ -0.77
MED28-202ENST00000499786 WDR7Q9Y4E6 1490 aa10.22□□□□□ -0.77
MED28-202ENST00000499786 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
MED28-202ENST00000499786 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
MED28-202ENST00000499786 NAIPQ13075 1403 aa10.21□□□□□ -0.78
MED28-202ENST00000499786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.21□□□□□ -0.78
MED28-202ENST00000499786 ARHGEF5Q12774 1597 aa10.2□□□□□ -0.78
MED28-202ENST00000499786 PTPRKQ15262 1439 aa10.2□□□□□ -0.78
MED28-202ENST00000499786 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
MED28-202ENST00000499786 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
MED28-202ENST00000499786 ABCC5O15440 1437 aa10.19□□□□□ -0.78
MED28-202ENST00000499786 SLC34A2O95436 690 aa10.19□□□□□ -0.78
MED28-202ENST00000499786 SAMD9LQ8IVG5 1584 aa10.18□□□□□ -0.78
MED28-202ENST00000499786 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
MED28-202ENST00000499786 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
MED28-202ENST00000499786 CHIC2Q9UKJ5 165 aa10.18□□□□□ -0.78
MED28-202ENST00000499786 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
MED28-202ENST00000499786 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
MED28-202ENST00000499786 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
MED28-202ENST00000499786 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
MED28-202ENST00000499786 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
MED28-202ENST00000499786 PTCD2Q8WV60 388 aaKnown RBP10.16□□□□□ -0.78
MED28-202ENST00000499786 KCNH8Q96L42 1107 aa10.16□□□□□ -0.78
MED28-202ENST00000499786 RRP7BPQ9NSQ0 103 aa10.16□□□□□ -0.78
MED28-202ENST00000499786 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
MED28-202ENST00000499786 ZNF644Q9H582 1327 aaPredicted RBP10.15□□□□□ -0.78
MED28-202ENST00000499786 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
MED28-202ENST00000499786 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
MED28-202ENST00000499786 MAPKBP1O60336 1514 aa10.15□□□□□ -0.78
MED28-202ENST00000499786 ASXL2Q76L83 1435 aa10.15□□□□□ -0.79
MED28-202ENST00000499786 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.79
MED28-202ENST00000499786 CFAP74Q9C0B2 1584 aa10.14□□□□□ -0.79
MED28-202ENST00000499786 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
MED28-202ENST00000499786 PLCH2O75038 1416 aa10.14□□□□□ -0.79
MED28-202ENST00000499786 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
MED28-202ENST00000499786 ABCC1P33527 1531 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
MED28-202ENST00000499786 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
MED28-202ENST00000499786 PLXNC1O60486 1568 aa10.11□□□□□ -0.79
MED28-202ENST00000499786 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
MED28-202ENST00000499786 BCANQ96GW7 911 aa10.11□□□□□ -0.79
MED28-202ENST00000499786 KDM4FA0A1W2PPD8 638 aa10.1□□□□□ -0.79
MED28-202ENST00000499786 DPYSL4O14531 572 aa10.1□□□□□ -0.79
MED28-202ENST00000499786 KDM6BO15054 1643 aa10.1□□□□□ -0.79
MED28-202ENST00000499786 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
MED28-202ENST00000499786 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
MED28-202ENST00000499786 ANKRD50Q9ULJ7 1429 aa10.09□□□□□ -0.79
MED28-202ENST00000499786 FANCAO15360 1455 aa10.09□□□□□ -0.79
MED28-202ENST00000499786 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
MED28-202ENST00000499786 PDIA6Q15084 440 aa10.08□□□□□ -0.8
MED28-202ENST00000499786 TONSLQ96HA7 1378 aa10.07□□□□□ -0.8
MED28-202ENST00000499786 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
MED28-202ENST00000499786 UPF1Q92900 1129 aaKnown RBP eCLIP10.07□□□□□ -0.8
MED28-202ENST00000499786 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
MED28-202ENST00000499786 ADGRL1O94910 1474 aa10.06□□□□□ -0.8
MED28-202ENST00000499786 CYB5RLQ6IPT4 315 aa10.06□□□□□ -0.8
MED28-202ENST00000499786 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
MED28-202ENST00000499786 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
MED28-202ENST00000499786 TIMELESSQ9UNS1 1208 aa10.06□□□□□ -0.8
MED28-202ENST00000499786 DUOX2Q9NRD8 1548 aa10.06□□□□□ -0.8
MED28-202ENST00000499786 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
MED28-202ENST00000499786 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
MED28-202ENST00000499786 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
MED28-202ENST00000499786 KDM5DQ9BY66 1539 aa10.05□□□□□ -0.8
MED28-202ENST00000499786 ZFYVE16Q7Z3T8 1539 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
MED28-202ENST00000499786 SEMA3EO15041 775 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 SNPHO15079 494 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 NEUROD1Q13562 356 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 CD109Q6YHK3 1445 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 ERBINQ96RT1 1412 aa10.04□□□□□ -0.8
MED28-202ENST00000499786 RTEL1-TNFRSF6BF6WH68 1400 aa10.03□□□□□ -0.8
MED28-202ENST00000499786 UNC13BO14795 1591 aa10.03□□□□□ -0.8
MED28-202ENST00000499786 TBC1D12O60347 775 aa10.03□□□□□ -0.8
MED28-202ENST00000499786 NBR1Q14596 966 aa10.03□□□□□ -0.8
MED28-202ENST00000499786 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms