RNA–Protein interactions for RNA: ENST00000498820.5

RET-204, Transcript of ret proto-oncogene, humanhuman

TSL 3

Gene RET, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-204ENST00000498820 POLR1AO95602 1720 aaPredicted RBP35.14■■■■□ 3.22
RET-204ENST00000498820 SCAF11Q99590 1463 aaKnown RBP35.14■■■■□ 3.22
RET-204ENST00000498820 NUTM2DQ5VT03 806 aaPredicted RBP35.13■■■■□ 3.21
RET-204ENST00000498820 NEURL4Q96JN8 1562 aa35.12■■■■□ 3.21
RET-204ENST00000498820 HDGFP51858 240 aaKnown RBP35.09■■■■□ 3.21
RET-204ENST00000498820 PPP1R15AO75807 674 aaPredicted RBP35.08■■■■□ 3.21
RET-204ENST00000498820 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.08■■■■□ 3.21
RET-204ENST00000498820 SIN3AQ96ST3 1273 aa35.08■■■■□ 3.21
RET-204ENST00000498820 NEXMIFQ5QGS0 1516 aa35.07■■■■□ 3.21
RET-204ENST00000498820 NPHP4O75161 1426 aaPredicted RBP35.06■■■■□ 3.2
RET-204ENST00000498820 MED14O60244 1454 aa35.06■■■■□ 3.2
RET-204ENST00000498820 DMRT2Q9Y5R5 561 aa35.06■■■■□ 3.2
RET-204ENST00000498820 SENP3Q9H4L4 574 aaPredicted RBP35.05■■■■□ 3.2
RET-204ENST00000498820 RPGRIP1LQ68CZ1 1315 aa35.05■■■■□ 3.2
RET-204ENST00000498820 NEUROD1Q13562 356 aa35.02■■■■□ 3.2
RET-204ENST00000498820 IQGAP1P46940 1657 aa34.99■■■■□ 3.19
RET-204ENST00000498820 BCANQ96GW7 911 aa34.98■■■■□ 3.19
RET-204ENST00000498820 PLEKHG1Q9ULL1 1385 aa34.98■■■■□ 3.19
RET-204ENST00000498820 PPLO60437 1756 aa34.97■■■■□ 3.19
RET-204ENST00000498820 VGFO15240 615 aaPredicted RBP34.95■■■■□ 3.19
RET-204ENST00000498820 CCER1Q8TC90 406 aaPredicted RBP34.95■■■■□ 3.19
RET-204ENST00000498820 IFT172Q9UG01 1749 aa34.94■■■■□ 3.18
RET-204ENST00000498820 SLC26A8Q96RN1 970 aa34.91■■■■□ 3.18
RET-204ENST00000498820 ADGRF5Q8IZF2 1346 aa34.89■■■■□ 3.18
RET-204ENST00000498820 DCAF11Q8TEB1 546 aa34.89■■■■□ 3.18
RET-204ENST00000498820 KDM2AQ9Y2K7 1162 aa34.88■■■■□ 3.17
RET-204ENST00000498820 CLSPNQ9HAW4 1339 aa34.85■■■■□ 3.17
RET-204ENST00000498820 ADAMTS13Q76LX8 1427 aa34.84■■■■□ 3.17
RET-204ENST00000498820 NRXN3Q9Y4C0 1643 aa34.84■■■■□ 3.17
RET-204ENST00000498820 MYOM2P54296 1465 aa34.84■■■■□ 3.17
RET-204ENST00000498820 SETBP1Q9Y6X0 1596 aa34.83■■■■□ 3.17
RET-204ENST00000498820 L3MBTL2Q969R5 705 aa34.82■■■■□ 3.16
RET-204ENST00000498820 TBX22Q9Y458 520 aa34.8■■■■□ 3.16
RET-204ENST00000498820 ZNF335Q9H4Z2 1342 aaPredicted RBP34.79■■■■□ 3.16
RET-204ENST00000498820 NRXN1Q9ULB1 1477 aa34.78■■■■□ 3.16
RET-204ENST00000498820 PIK3C2GO75747 1445 aa34.77■■■■□ 3.16
RET-204ENST00000498820 DIP2AQ14689 1571 aa34.76■■■■□ 3.16
RET-204ENST00000498820 TONSLQ96HA7 1378 aa34.75■■■■□ 3.15
RET-204ENST00000498820 STAC3Q96MF2 364 aa34.75■■■■□ 3.15
RET-204ENST00000498820 ALKQ9UM73 1620 aa34.73■■■■□ 3.15
RET-204ENST00000498820 METP08581 1390 aa34.7■■■■□ 3.15
RET-204ENST00000498820 SETD1AO15047 1707 aaKnown RBP34.67■■■■□ 3.14
RET-204ENST00000498820 CFAP70Q5T0N1 1121 aa34.67■■■■□ 3.14
RET-204ENST00000498820 KCNA6P17658 529 aa34.65■■■■□ 3.14
RET-204ENST00000498820 C14orf93Q9H972 538 aaKnown RBP34.65■■■■□ 3.14
RET-204ENST00000498820 STRCP1A6NGW2 1772 aa34.64■■■■□ 3.14
RET-204ENST00000498820 PIK3R4Q99570 1358 aa34.64■■■■□ 3.14
RET-204ENST00000498820 LTBP4Q8N2S1 1624 aa34.64■■■■□ 3.14
RET-204ENST00000498820 PRAG1Q86YV5 1406 aa34.64■■■■□ 3.14
RET-204ENST00000498820 PTPRUQ92729 1446 aa34.64■■■■□ 3.14
RET-204ENST00000498820 CHD2O14647 1828 aaKnown RBP34.6■■■■□ 3.13
RET-204ENST00000498820 TMEM132EQ6IEE7 984 aa34.6■■■■□ 3.13
RET-204ENST00000498820 NWD1Q149M9 1564 aa34.6■■■■□ 3.13
RET-204ENST00000498820 LAMC1P11047 1609 aa34.59■■■■□ 3.13
RET-204ENST00000498820 AMOTL2Q9Y2J4 779 aa34.59■■■■□ 3.13
RET-204ENST00000498820 ASXL1Q8IXJ9 1541 aa34.59■■■■□ 3.13
RET-204ENST00000498820 CPS1P31327 1500 aa34.56■■■■□ 3.12
RET-204ENST00000498820 TIMELESSQ9UNS1 1208 aa34.54■■■■□ 3.12
RET-204ENST00000498820 NBPF8Q3BBV2 869 aa34.53■■■■□ 3.12
RET-204ENST00000498820 XRN1Q8IZH2 1706 aaKnown RBP34.52■■■■□ 3.12
RET-204ENST00000498820 STK26Q9P289 416 aa34.51■■■■□ 3.12
RET-204ENST00000498820 NKTRP30414 1462 aaKnown RBP34.51■■■■□ 3.11
RET-204ENST00000498820 LRRC7Q96NW7 1537 aa34.5■■■■□ 3.11
RET-204ENST00000498820 ADGRB1O14514 1584 aa34.49■■■■□ 3.11
RET-204ENST00000498820 PROSER2Q86WR7 435 aaPredicted RBP34.49■■■■□ 3.11
RET-204ENST00000498820 NBPF1Q3BBV0 1214 aa34.48■■■■□ 3.11
RET-204ENST00000498820 RBM33Q96EV2 1170 aaKnown RBP34.48■■■■□ 3.11
RET-204ENST00000498820 LRPPRCP42704 1394 aaKnown RBP34.48■■■■□ 3.11
RET-204ENST00000498820 YTHDC2Q9H6S0 1430 aaKnown RBP34.47■■■■□ 3.11
RET-204ENST00000498820 KIAA1210Q9ULL0 1709 aa34.47■■■■□ 3.11
RET-204ENST00000498820 CERKQ8TCT0 537 aa34.47■■■■□ 3.11
RET-204ENST00000498820 TRPM1Q7Z4N2 1603 aa34.44■■■■□ 3.1
RET-204ENST00000498820 TMEM94Q12767 1356 aa34.43■■■■□ 3.1
RET-204ENST00000498820 ABCC11Q96J66 1382 aa34.42■■■■□ 3.1
RET-204ENST00000498820 ROBO2Q9HCK4 1378 aa34.42■■■■□ 3.1
RET-204ENST00000498820 PTCH1Q13635 1447 aa34.4■■■■□ 3.1
RET-204ENST00000498820 TECPR2O15040 1411 aa34.39■■■■□ 3.1
RET-204ENST00000498820 TRAK1Q9UPV9 953 aa34.38■■■■□ 3.09
RET-204ENST00000498820 ROCK2O75116 1388 aaKnown RBP34.37■■■■□ 3.09
RET-204ENST00000498820 KNDC1Q76NI1 1749 aa34.37■■■■□ 3.09
RET-204ENST00000498820 XIRP1Q702N8 1843 aaKnown RBP34.37■■■■□ 3.09
RET-204ENST00000498820 RALGAPBQ86X10 1494 aa34.34■■■■□ 3.09
RET-204ENST00000498820 WAPLQ7Z5K2 1190 aa34.33■■■■□ 3.09
RET-204ENST00000498820 C14orf37Q86TY3 774 aa34.32■■■■□ 3.08
RET-204ENST00000498820 IQSEC2Q5JU85 1478 aa34.32■■■■□ 3.08
RET-204ENST00000498820 PLEKHH1Q9ULM0 1364 aa34.31■■■■□ 3.08
RET-204ENST00000498820 DLC1Q96QB1 1528 aa34.3■■■■□ 3.08
RET-204ENST00000498820 NCOA3Q9Y6Q9 1424 aa34.3■■■■□ 3.08
RET-204ENST00000498820 SIRT1Q96EB6 747 aa34.29■■■■□ 3.08
RET-204ENST00000498820 PRAM1Q96QH2 718 aa34.29■■■■□ 3.08
RET-204ENST00000498820 FAM135BQ49AJ0 1406 aa34.29■■■■□ 3.08
RET-204ENST00000498820 GPRASP1Q5JY77 1395 aa34.28■■■■□ 3.08
RET-204ENST00000498820 CARD11Q9BXL7 1154 aa34.26■■■■□ 3.08
RET-204ENST00000498820 SAFB2Q14151 953 aaKnown RBP eCLIP34.25■■■■□ 3.07
RET-204ENST00000498820 POGKQ9P215 609 aa34.25■■■■□ 3.07
RET-204ENST00000498820 MSH6P52701 1360 aa34.24■■■■□ 3.07
RET-204ENST00000498820 ARHGEF28Q8N1W1 1705 aaKnown RBP34.24■■■■□ 3.07
RET-204ENST00000498820 ADGRL3Q9HAR2 1447 aa34.21■■■■□ 3.07
RET-204ENST00000498820 C19orf44Q9H6X5 657 aa34.21■■■■□ 3.07
RET-204ENST00000498820 NALCNQ8IZF0 1738 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms