RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ZNF775Q96BV0 537 aaPredicted RBP9.74□□□□□ -0.85
HMGXB4-208ENST00000498325 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
HMGXB4-208ENST00000498325 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
HMGXB4-208ENST00000498325 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
HMGXB4-208ENST00000498325 ZPR1O75312 459 aa9.72□□□□□ -0.85
HMGXB4-208ENST00000498325 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
HMGXB4-208ENST00000498325 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
HMGXB4-208ENST00000498325 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-208ENST00000498325 RIMBP3CA6NJZ7 1639 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 RIMBP3BA6NNM3 1639 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 SLC19A1P41440 591 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 PRR14Q9BWN1 585 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 RIMBP3Q9UFD9 1639 aa9.69□□□□□ -0.86
HMGXB4-208ENST00000498325 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
HMGXB4-208ENST00000498325 PCDHB3Q9Y5E6 796 aa9.68□□□□□ -0.86
HMGXB4-208ENST00000498325 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
HMGXB4-208ENST00000498325 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
HMGXB4-208ENST00000498325 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
HMGXB4-208ENST00000498325 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-208ENST00000498325 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
HMGXB4-208ENST00000498325 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
HMGXB4-208ENST00000498325 EYA1Q99502 592 aa9.65□□□□□ -0.86
HMGXB4-208ENST00000498325 DGAT1O75907 488 aa9.64□□□□□ -0.87
HMGXB4-208ENST00000498325 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
HMGXB4-208ENST00000498325 MYT1Q01538 1121 aa9.63□□□□□ -0.87
HMGXB4-208ENST00000498325 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
HMGXB4-208ENST00000498325 EMID1Q96A84 441 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-208ENST00000498325 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-208ENST00000498325 TLL1O43897 1013 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PRR20EP86478 221 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PRR20CP86479 221 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PRR20DP86480 221 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PRR20BP86481 221 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PRR20AP86496 221 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 ANKLE1Q8NAG6 615 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
HMGXB4-208ENST00000498325 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
HMGXB4-208ENST00000498325 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-208ENST00000498325 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
HMGXB4-208ENST00000498325 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
HMGXB4-208ENST00000498325 POTECB2RU33 542 aa9.58□□□□□ -0.88
HMGXB4-208ENST00000498325 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
HMGXB4-208ENST00000498325 S1PR4O95977 384 aa9.58□□□□□ -0.88
HMGXB4-208ENST00000498325 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
HMGXB4-208ENST00000498325 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
HMGXB4-208ENST00000498325 WDR62O43379 1518 aa9.57□□□□□ -0.88
HMGXB4-208ENST00000498325 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
HMGXB4-208ENST00000498325 DNAJB2P25686 324 aa9.57□□□□□ -0.88
HMGXB4-208ENST00000498325 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
HMGXB4-208ENST00000498325 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
HMGXB4-208ENST00000498325 TNFRSF10AO00220 468 aa9.55□□□□□ -0.88
HMGXB4-208ENST00000498325 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-208ENST00000498325 GDF9O60383 454 aa9.54□□□□□ -0.88
HMGXB4-208ENST00000498325 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-208ENST00000498325 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
HMGXB4-208ENST00000498325 ADH1BP00325 375 aa9.52□□□□□ -0.89
HMGXB4-208ENST00000498325 CFHP08603 1231 aa9.52□□□□□ -0.89
HMGXB4-208ENST00000498325 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
HMGXB4-208ENST00000498325 PAXIP1Q6ZW49 1069 aaPredicted RBP9.51□□□□□ -0.89
HMGXB4-208ENST00000498325 ADGRG1Q9Y653 693 aa9.51□□□□□ -0.89
HMGXB4-208ENST00000498325 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
HMGXB4-208ENST00000498325 NR1I2O75469 434 aa9.5□□□□□ -0.89
HMGXB4-208ENST00000498325 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-208ENST00000498325 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 PTGDRQ13258 359 aa9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
HMGXB4-208ENST00000498325 ARAP1Q96P48 1450 aa9.48□□□□□ -0.89
HMGXB4-208ENST00000498325 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
HMGXB4-208ENST00000498325 SLC10A3P09131 477 aa9.46□□□□□ -0.9
HMGXB4-208ENST00000498325 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
HMGXB4-208ENST00000498325 FOXC1Q12948 553 aa9.45□□□□□ -0.9
HMGXB4-208ENST00000498325 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
HMGXB4-208ENST00000498325 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
HMGXB4-208ENST00000498325 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
HMGXB4-208ENST00000498325 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
HMGXB4-208ENST00000498325 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-208ENST00000498325 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
HMGXB4-208ENST00000498325 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
HMGXB4-208ENST00000498325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-208ENST00000498325 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
HMGXB4-208ENST00000498325 SPSB2Q99619 263 aa9.41□□□□□ -0.9
HMGXB4-208ENST00000498325 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
HMGXB4-208ENST00000498325 RPIAP49247 311 aa9.39□□□□□ -0.91
HMGXB4-208ENST00000498325 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
HMGXB4-208ENST00000498325 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
HMGXB4-208ENST00000498325 CEP164Q9UPV0 1460 aa9.39□□□□□ -0.91
HMGXB4-208ENST00000498325 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
HMGXB4-208ENST00000498325 FCHSD2O94868 740 aa9.37□□□□□ -0.91
HMGXB4-208ENST00000498325 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-208ENST00000498325 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
HMGXB4-208ENST00000498325 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-208ENST00000498325 AXIN1O15169 862 aa9.36□□□□□ -0.91
HMGXB4-208ENST00000498325 WFS1O76024 890 aa9.36□□□□□ -0.91
HMGXB4-208ENST00000498325 AVPP01185 164 aa9.36□□□□□ -0.91
HMGXB4-208ENST00000498325 OATP04181 439 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms