RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 LMTK2Q8IWU2 1503 aa19.93■□□□□ 0.78
TRIM27-207ENST00000498117 NOS1P29475 1434 aa19.93■□□□□ 0.78
TRIM27-207ENST00000498117 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
TRIM27-207ENST00000498117 FGD6Q6ZV73 1430 aa19.92■□□□□ 0.78
TRIM27-207ENST00000498117 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
TRIM27-207ENST00000498117 C14orf37Q86TY3 774 aa19.9■□□□□ 0.78
TRIM27-207ENST00000498117 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
TRIM27-207ENST00000498117 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
TRIM27-207ENST00000498117 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
TRIM27-207ENST00000498117 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
TRIM27-207ENST00000498117 DAPK1P53355 1430 aa19.88■□□□□ 0.77
TRIM27-207ENST00000498117 PLEKHG1Q9ULL1 1385 aa19.88■□□□□ 0.77
TRIM27-207ENST00000498117 RXRBP28702 533 aa19.88■□□□□ 0.77
TRIM27-207ENST00000498117 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
TRIM27-207ENST00000498117 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
TRIM27-207ENST00000498117 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
TRIM27-207ENST00000498117 LRP6O75581 1613 aa19.87■□□□□ 0.77
TRIM27-207ENST00000498117 ATF3P18847 181 aa19.86■□□□□ 0.77
TRIM27-207ENST00000498117 C19orf44Q9H6X5 657 aa19.86■□□□□ 0.77
TRIM27-207ENST00000498117 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
TRIM27-207ENST00000498117 CHD2O14647 1828 aaKnown RBP19.84■□□□□ 0.77
TRIM27-207ENST00000498117 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
TRIM27-207ENST00000498117 RIMS2Q9UQ26 1411 aa19.84■□□□□ 0.77
TRIM27-207ENST00000498117 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
TRIM27-207ENST00000498117 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRIM27-207ENST00000498117 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
TRIM27-207ENST00000498117 APLP2Q06481 763 aa19.81■□□□□ 0.76
TRIM27-207ENST00000498117 AHDC1Q5TGY3 1603 aaPredicted RBP19.8■□□□□ 0.76
TRIM27-207ENST00000498117 NUTM2BA6NNL0 878 aaPredicted RBP19.79■□□□□ 0.76
TRIM27-207ENST00000498117 NUTM2EB1AL46 878 aaPredicted RBP19.79■□□□□ 0.76
TRIM27-207ENST00000498117 NUTM2AQ8IVF1 878 aaPredicted RBP19.79■□□□□ 0.76
TRIM27-207ENST00000498117 CDK12Q9NYV4 1490 aaPredicted RBP19.79■□□□□ 0.76
TRIM27-207ENST00000498117 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
TRIM27-207ENST00000498117 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
TRIM27-207ENST00000498117 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
TRIM27-207ENST00000498117 SHPRHQ149N8 1683 aa19.77■□□□□ 0.76
TRIM27-207ENST00000498117 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
TRIM27-207ENST00000498117 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.75■□□□□ 0.75
TRIM27-207ENST00000498117 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
TRIM27-207ENST00000498117 AFF2P51816 1311 aa19.75■□□□□ 0.75
TRIM27-207ENST00000498117 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
TRIM27-207ENST00000498117 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
TRIM27-207ENST00000498117 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
TRIM27-207ENST00000498117 ANKRD50Q9ULJ7 1429 aa19.72■□□□□ 0.75
TRIM27-207ENST00000498117 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
TRIM27-207ENST00000498117 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
TRIM27-207ENST00000498117 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
TRIM27-207ENST00000498117 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
TRIM27-207ENST00000498117 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
TRIM27-207ENST00000498117 DIP2AQ14689 1571 aa19.7■□□□□ 0.74
TRIM27-207ENST00000498117 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
TRIM27-207ENST00000498117 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
TRIM27-207ENST00000498117 DCCP43146 1447 aa19.68■□□□□ 0.74
TRIM27-207ENST00000498117 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
TRIM27-207ENST00000498117 TRPM2O94759 1503 aa19.66■□□□□ 0.74
TRIM27-207ENST00000498117 FAM50AQ14320 339 aaKnown RBP19.65■□□□□ 0.74
TRIM27-207ENST00000498117 NGLY1Q96IV0 654 aa19.64■□□□□ 0.73
TRIM27-207ENST00000498117 RGS12O14924 1447 aa19.64■□□□□ 0.73
TRIM27-207ENST00000498117 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
TRIM27-207ENST00000498117 ASXL1Q8IXJ9 1541 aa19.64■□□□□ 0.73
TRIM27-207ENST00000498117 FOXD1Q16676 465 aa19.63■□□□□ 0.73
TRIM27-207ENST00000498117 SRCAPQ6ZRS2 3230 aa19.62■□□□□ 0.73
TRIM27-207ENST00000498117 MST1RQ04912 1400 aa19.61■□□□□ 0.73
TRIM27-207ENST00000498117 PNPLA6Q8IY17 1366 aa19.59■□□□□ 0.73
TRIM27-207ENST00000498117 ATAD2Q6PL18 1390 aa19.58■□□□□ 0.73
TRIM27-207ENST00000498117 DDX17Q92841 729 aaKnown RBP19.58■□□□□ 0.72
TRIM27-207ENST00000498117 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.72
TRIM27-207ENST00000498117 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
TRIM27-207ENST00000498117 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
TRIM27-207ENST00000498117 UNC13BO14795 1591 aa19.56■□□□□ 0.72
TRIM27-207ENST00000498117 E9PCH4 1651 aa19.55■□□□□ 0.72
TRIM27-207ENST00000498117 USP21Q9UK80 565 aa19.54■□□□□ 0.72
TRIM27-207ENST00000498117 TRPC5Q9UL62 973 aaPredicted RBP19.54■□□□□ 0.72
TRIM27-207ENST00000498117 ADGRL3Q9HAR2 1447 aa19.53■□□□□ 0.72
TRIM27-207ENST00000498117 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
TRIM27-207ENST00000498117 METP08581 1390 aa19.53■□□□□ 0.72
TRIM27-207ENST00000498117 XRN1Q8IZH2 1706 aaKnown RBP19.53■□□□□ 0.72
TRIM27-207ENST00000498117 NUP155O75694 1391 aa19.52■□□□□ 0.72
TRIM27-207ENST00000498117 SETBP1Q9Y6X0 1596 aa19.51■□□□□ 0.71
TRIM27-207ENST00000498117 FNBP4Q8N3X1 1017 aaPredicted RBP19.5■□□□□ 0.71
TRIM27-207ENST00000498117 CCDC125Q86Z20 511 aa19.49■□□□□ 0.71
TRIM27-207ENST00000498117 SOS2Q07890 1332 aaPredicted RBP19.49■□□□□ 0.71
TRIM27-207ENST00000498117 C1orf167Q5SNV9 1468 aa19.48■□□□□ 0.71
TRIM27-207ENST00000498117 IQGAP3Q86VI3 1631 aa19.48■□□□□ 0.71
TRIM27-207ENST00000498117 NRXN3Q9Y4C0 1643 aa19.48■□□□□ 0.71
TRIM27-207ENST00000498117 ROCK1Q13464 1354 aa19.47■□□□□ 0.71
TRIM27-207ENST00000498117 PTCH1Q13635 1447 aa19.46■□□□□ 0.71
TRIM27-207ENST00000498117 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
TRIM27-207ENST00000498117 ATRNO75882 1429 aa19.43■□□□□ 0.7
TRIM27-207ENST00000498117 LAMC1P11047 1609 aa19.4■□□□□ 0.7
TRIM27-207ENST00000498117 NALCNQ8IZF0 1738 aa19.4■□□□□ 0.7
TRIM27-207ENST00000498117 GJD4Q96KN9 370 aaPredicted RBP19.37■□□□□ 0.69
TRIM27-207ENST00000498117 ROBO2Q9HCK4 1378 aa19.36■□□□□ 0.69
TRIM27-207ENST00000498117 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
TRIM27-207ENST00000498117 VGFO15240 615 aaPredicted RBP19.36■□□□□ 0.69
TRIM27-207ENST00000498117 BCL9LQ86UU0 1499 aa19.35■□□□□ 0.69
TRIM27-207ENST00000498117 SPHKAPQ2M3C7 1700 aa19.35■□□□□ 0.69
TRIM27-207ENST00000498117 EP400Q96L91 3159 aa19.35■□□□□ 0.69
TRIM27-207ENST00000498117 NEXMIFQ5QGS0 1516 aa19.35■□□□□ 0.69
TRIM27-207ENST00000498117 ITGAEP38570 1179 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms