RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DCAF1Q9Y4B6 1507 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 NCOA1Q15788 1441 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 TLDC2A0PJX2 215 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 PLA2R1Q13018 1463 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 IRX5P78411 483 aaPredicted RBP2.13□□□□□ -2.07
XRN1-214ENST00000498077 NBPF9Q3BBW0 867 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 FAM122AQ96E09 287 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 PRDM10Q9NQV6 1147 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 KDM2AQ9Y2K7 1162 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 FANCAO15360 1455 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 SYNGAP1Q96PV0 1343 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 CDC25BP30305 580 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 RALGAPBQ86X10 1494 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 XIRP1Q702N8 1843 aaKnown RBP2.13□□□□□ -2.07
XRN1-214ENST00000498077 ARID3CA6NKF2 412 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 PKD2Q13563 968 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 HCSTQ9UBK5 93 aa2.13□□□□□ -2.07
XRN1-214ENST00000498077 MAGI3Q5TCQ9 1506 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 NASPP49321 788 aaPredicted RBP2.12□□□□□ -2.07
XRN1-214ENST00000498077 PRR14Q9BWN1 585 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 GGCXP38435 758 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 MAP3K9P80192 1104 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 ARAP3Q8WWN8 1544 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 FANCD2Q9BXW9 1451 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.12□□□□□ -2.07
XRN1-214ENST00000498077 HOXB1P14653 301 aaPredicted RBP2.12□□□□□ -2.07
XRN1-214ENST00000498077 KRI1Q8N9T8 703 aaKnown RBP2.12□□□□□ -2.07
XRN1-214ENST00000498077 ZFP91Q96JP5 570 aaPredicted RBP2.12□□□□□ -2.07
XRN1-214ENST00000498077 POLEQ07864 2286 aa2.12□□□□□ -2.07
XRN1-214ENST00000498077 FER1L4A9Z1Z3 1794 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 TRIM26Q12899 539 aaPredicted RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 SPATA31A6Q5VVP1 1343 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 FAM161AQ3B820 660 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 AXDND1Q5T1B0 1012 aaPredicted RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 EPAS1Q99814 870 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 PNNQ9H307 717 aaKnown RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 BBXQ8WY36 941 aaPredicted RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 FBXW7Q969H0 707 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 ARHGAP23Q9P227 1491 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 FGD6Q6ZV73 1430 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 CDV3Q9UKY7 258 aaKnown RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 SETD1BQ9UPS6 1966 aaKnown RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 ONECUT3O60422 494 aaPredicted RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 BCL11BQ9C0K0 894 aaPredicted RBP2.11□□□□□ -2.07
XRN1-214ENST00000498077 NBPF3Q9H094 633 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 BRWD1Q9NSI6 2320 aa2.11□□□□□ -2.07
XRN1-214ENST00000498077 KIF14Q15058 1648 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 SUN1O94901 812 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 COL13A1Q5TAT6 717 aaPredicted RBP2.1□□□□□ -2.07
XRN1-214ENST00000498077 NGLY1Q96IV0 654 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 PEG3Q9GZU2 1588 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 ZCCHC6Q5VYS8 1495 aaKnown RBP2.1□□□□□ -2.07
XRN1-214ENST00000498077 SPDYE16A6NNV3 312 aaPredicted RBP2.1□□□□□ -2.07
XRN1-214ENST00000498077 HS6ST3Q8IZP7 471 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 EFCAB3Q8N7B9 438 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 POLR3GLQ9BT43 218 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 CEP170Q5SW79 1584 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 RTEL1-TNFRSF6BF6WH68 1400 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 BLMP54132 1417 aaPredicted RBP2.1□□□□□ -2.07
XRN1-214ENST00000498077 FAM83GA6ND36 823 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 PACS2Q86VP3 889 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 NYAP1Q6ZVC0 841 aa2.1□□□□□ -2.07
XRN1-214ENST00000498077 TK2O00142 265 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 DACH1Q9UI36 760 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 SPHKAPQ2M3C7 1700 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 FAM135BQ49AJ0 1406 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 CHGAP10645 457 aaKnown RBP2.09□□□□□ -2.07
XRN1-214ENST00000498077 LAPTM4AQ15012 233 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 MAP3K11Q16584 847 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 IFNLR1Q8IU57 520 aaPredicted RBP2.09□□□□□ -2.07
XRN1-214ENST00000498077 VWDEQ8N2E2 1590 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 SPARCP09486 303 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 PTPREP23469 700 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 ZNF687Q8N1G0 1237 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 RSPH6AQ9H0K4 717 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 JCADQ9P266 1359 aa2.09□□□□□ -2.07
XRN1-214ENST00000498077 BCL9LQ86UU0 1499 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 URB2Q14146 1524 aaKnown RBP2.09□□□□□ -2.08
XRN1-214ENST00000498077 POTEIP0CG38 1075 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 RPS8P62241 208 aaKnown RBP2.09□□□□□ -2.08
XRN1-214ENST00000498077 AAMPQ13685 434 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 LAPTM4BQ86VI4 370 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 RNF166Q96A37 237 aaPredicted RBP2.09□□□□□ -2.08
XRN1-214ENST00000498077 OTUD5Q96G74 571 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 ARHGAP33O14559 1287 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 HSPA2P54652 639 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 ANKRD13DQ6ZTN6 518 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 MICALL2Q8IY33 904 aa2.09□□□□□ -2.08
XRN1-214ENST00000498077 SF3B2Q13435 895 aaKnown RBP2.08□□□□□ -2.08
XRN1-214ENST00000498077 LMOD2Q6P5Q4 547 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 FAM205CA6NFA0 338 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 PRDM2Q13029 1718 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 TARBP1Q13395 1621 aaKnown RBP2.08□□□□□ -2.08
XRN1-214ENST00000498077 KLRG1Q96E93 195 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 CFAP44Q96MT7 982 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 PCDHA8Q9Y5H6 950 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 BIVM-ERCC5R4GMW8 1640 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 SCO2A0A1W2PP80 73 aa2.08□□□□□ -2.08
XRN1-214ENST00000498077 RBM6P78332 1123 aaKnown RBP2.08□□□□□ -2.08
XRN1-214ENST00000498077 PPP4R4Q6NUP7 873 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms