RNA–Protein interactions for RNA: ENST00000498054.1

POLR1B-215, Transcript of RNA polymerase I subunit B, humanhuman

TSL 3

Gene POLR1B, Length 636 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-215ENST00000498054 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
POLR1B-215ENST00000498054 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
POLR1B-215ENST00000498054 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
POLR1B-215ENST00000498054 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.02
POLR1B-215ENST00000498054 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.02
POLR1B-215ENST00000498054 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
POLR1B-215ENST00000498054 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
POLR1B-215ENST00000498054 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
POLR1B-215ENST00000498054 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
POLR1B-215ENST00000498054 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
POLR1B-215ENST00000498054 ATP1B4Q9UN42 357 aaPredicted RBP8.7□□□□□ -1.02
POLR1B-215ENST00000498054 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
POLR1B-215ENST00000498054 MS4A1P11836 297 aa8.69□□□□□ -1.02
POLR1B-215ENST00000498054 PACS2Q86VP3 889 aa8.69□□□□□ -1.02
POLR1B-215ENST00000498054 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
POLR1B-215ENST00000498054 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
POLR1B-215ENST00000498054 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
POLR1B-215ENST00000498054 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
POLR1B-215ENST00000498054 FAM198AQ9UFP1 575 aa8.68□□□□□ -1.02
POLR1B-215ENST00000498054 SMAPO00193 183 aa8.67□□□□□ -1.02
POLR1B-215ENST00000498054 TTC13Q8NBP0 860 aa8.67□□□□□ -1.02
POLR1B-215ENST00000498054 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.67□□□□□ -1.02
POLR1B-215ENST00000498054 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
POLR1B-215ENST00000498054 A0A0G2JS52 829 aa8.65□□□□□ -1.02
POLR1B-215ENST00000498054 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
POLR1B-215ENST00000498054 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
POLR1B-215ENST00000498054 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
POLR1B-215ENST00000498054 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
POLR1B-215ENST00000498054 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
POLR1B-215ENST00000498054 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
POLR1B-215ENST00000498054 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
POLR1B-215ENST00000498054 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
POLR1B-215ENST00000498054 NBPF26B4DH59 902 aa8.63□□□□□ -1.03
POLR1B-215ENST00000498054 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
POLR1B-215ENST00000498054 FAM217BQ9NTX9 383 aaPredicted RBP8.63□□□□□ -1.03
POLR1B-215ENST00000498054 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
POLR1B-215ENST00000498054 RCCD1A6NED2 376 aa8.62□□□□□ -1.03
POLR1B-215ENST00000498054 SAMD7Q7Z3H4 446 aa8.62□□□□□ -1.03
POLR1B-215ENST00000498054 TATDN2Q93075 761 aa8.62□□□□□ -1.03
POLR1B-215ENST00000498054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
POLR1B-215ENST00000498054 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
POLR1B-215ENST00000498054 EYA1Q99502 592 aa8.6□□□□□ -1.03
POLR1B-215ENST00000498054 RGS20O76081 388 aa8.59□□□□□ -1.03
POLR1B-215ENST00000498054 PPP4CP60510 307 aa8.59□□□□□ -1.03
POLR1B-215ENST00000498054 POLR3EQ9NVU0 708 aa8.59□□□□□ -1.03
POLR1B-215ENST00000498054 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
POLR1B-215ENST00000498054 DNAJB2P25686 324 aa8.58□□□□□ -1.04
POLR1B-215ENST00000498054 KCNC4Q03721 635 aa8.58□□□□□ -1.04
POLR1B-215ENST00000498054 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
POLR1B-215ENST00000498054 SKIV2LQ15477 1246 aaKnown RBP8.56□□□□□ -1.04
POLR1B-215ENST00000498054 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
POLR1B-215ENST00000498054 SULF1Q8IWU6 871 aa8.56□□□□□ -1.04
POLR1B-215ENST00000498054 RNF40O75150 1001 aa8.54□□□□□ -1.04
POLR1B-215ENST00000498054 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
POLR1B-215ENST00000498054 PROCA1Q8NCQ7 364 aaPredicted RBP8.54□□□□□ -1.04
POLR1B-215ENST00000498054 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
POLR1B-215ENST00000498054 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
POLR1B-215ENST00000498054 HDGFP51858 240 aaKnown RBP8.53□□□□□ -1.04
POLR1B-215ENST00000498054 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
POLR1B-215ENST00000498054 DIXDC1Q155Q3 683 aa8.52□□□□□ -1.05
POLR1B-215ENST00000498054 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
POLR1B-215ENST00000498054 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
POLR1B-215ENST00000498054 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
POLR1B-215ENST00000498054 SWT1Q5T5J6 900 aaKnown RBP8.51□□□□□ -1.05
POLR1B-215ENST00000498054 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
POLR1B-215ENST00000498054 CD46P15529 392 aa8.5□□□□□ -1.05
POLR1B-215ENST00000498054 CLK2P49760 499 aaKnown RBP8.5□□□□□ -1.05
POLR1B-215ENST00000498054 SPIRE2Q8WWL2 714 aa8.5□□□□□ -1.05
POLR1B-215ENST00000498054 IRX2Q9BZI1 471 aaPredicted RBP8.5□□□□□ -1.05
POLR1B-215ENST00000498054 APLP1P51693 650 aa8.49□□□□□ -1.05
POLR1B-215ENST00000498054 MTRQ99707 1265 aa8.49□□□□□ -1.05
POLR1B-215ENST00000498054 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
POLR1B-215ENST00000498054 FLIIQ13045 1269 aa8.48□□□□□ -1.05
POLR1B-215ENST00000498054 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
POLR1B-215ENST00000498054 ZMYND15Q9H091 742 aa8.48□□□□□ -1.05
POLR1B-215ENST00000498054 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
POLR1B-215ENST00000498054 SLF2Q8IX21 1173 aa8.46□□□□□ -1.06
POLR1B-215ENST00000498054 ZNF516Q92618 1163 aa8.46□□□□□ -1.06
POLR1B-215ENST00000498054 IL21Q9HBE4 155 aa8.46□□□□□ -1.06
POLR1B-215ENST00000498054 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
POLR1B-215ENST00000498054 MOXD2PA6NHM9 499 aa8.44□□□□□ -1.06
POLR1B-215ENST00000498054 KDM4AO75164 1064 aa8.44□□□□□ -1.06
POLR1B-215ENST00000498054 NDUFV2P19404 249 aa8.44□□□□□ -1.06
POLR1B-215ENST00000498054 GCGRP47871 477 aa8.43□□□□□ -1.06
POLR1B-215ENST00000498054 NECTIN2Q92692 538 aa8.43□□□□□ -1.06
POLR1B-215ENST00000498054 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
POLR1B-215ENST00000498054 NUTM2BA6NNL0 878 aaPredicted RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 NUTM2EB1AL46 878 aaPredicted RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 UBTFP17480 764 aaKnown RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 COPS2P61201 443 aa8.42□□□□□ -1.06
POLR1B-215ENST00000498054 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 RSBN1LQ6PCB5 846 aaPredicted RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 NUTM2AQ8IVF1 878 aaPredicted RBP8.42□□□□□ -1.06
POLR1B-215ENST00000498054 SPTLC1O15269 473 aa8.41□□□□□ -1.06
POLR1B-215ENST00000498054 SLC10A3P09131 477 aa8.41□□□□□ -1.06
POLR1B-215ENST00000498054 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
POLR1B-215ENST00000498054 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
POLR1B-215ENST00000498054 RFC5P40937 340 aa8.4□□□□□ -1.06
POLR1B-215ENST00000498054 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
POLR1B-215ENST00000498054 USP46P62068 366 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms