RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 RRBP1Q9P2E9 1410 aaKnown RBP30.98■■■□□ 2.55
LMBR1-219ENST00000498034 XIRP1Q702N8 1843 aaKnown RBP30.97■■■□□ 2.55
LMBR1-219ENST00000498034 CHGAP10645 457 aaKnown RBP30.97■■■□□ 2.55
LMBR1-219ENST00000498034 ZFYVE9O95405 1425 aa30.97■■■□□ 2.55
LMBR1-219ENST00000498034 BCANQ96GW7 911 aa30.96■■■□□ 2.55
LMBR1-219ENST00000498034 KCNA6P17658 529 aa30.95■■■□□ 2.55
LMBR1-219ENST00000498034 RIMS2Q9UQ26 1411 aa30.95■■■□□ 2.54
LMBR1-219ENST00000498034 PPP1R15AO75807 674 aaPredicted RBP30.91■■■□□ 2.54
LMBR1-219ENST00000498034 HDGFP51858 240 aaKnown RBP30.91■■■□□ 2.54
LMBR1-219ENST00000498034 PLEKHG1Q9ULL1 1385 aa30.9■■■□□ 2.54
LMBR1-219ENST00000498034 TMEM94Q12767 1356 aa30.88■■■□□ 2.53
LMBR1-219ENST00000498034 PROSER2Q86WR7 435 aaPredicted RBP30.87■■■□□ 2.53
LMBR1-219ENST00000498034 NUTM2DQ5VT03 806 aaPredicted RBP30.86■■■□□ 2.53
LMBR1-219ENST00000498034 RBM33Q96EV2 1170 aaKnown RBP30.86■■■□□ 2.53
LMBR1-219ENST00000498034 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.85■■■□□ 2.53
LMBR1-219ENST00000498034 NWD1Q149M9 1564 aa30.84■■■□□ 2.53
LMBR1-219ENST00000498034 NAIPQ13075 1403 aa30.83■■■□□ 2.53
LMBR1-219ENST00000498034 NKTRP30414 1462 aaKnown RBP30.8■■■□□ 2.52
LMBR1-219ENST00000498034 SPHKAPQ2M3C7 1700 aa30.79■■■□□ 2.52
LMBR1-219ENST00000498034 TBX22Q9Y458 520 aa30.79■■■□□ 2.52
LMBR1-219ENST00000498034 MED1Q15648 1581 aaPredicted RBP30.79■■■□□ 2.52
LMBR1-219ENST00000498034 CHD2O14647 1828 aaKnown RBP30.78■■■□□ 2.52
LMBR1-219ENST00000498034 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
LMBR1-219ENST00000498034 FAM135BQ49AJ0 1406 aa30.72■■■□□ 2.51
LMBR1-219ENST00000498034 HFM1A2PYH4 1435 aa30.71■■■□□ 2.51
LMBR1-219ENST00000498034 SOCS7O14512 581 aa30.7■■■□□ 2.51
LMBR1-219ENST00000498034 TRIM52Q96A61 297 aa30.7■■■□□ 2.51
LMBR1-219ENST00000498034 DIP2AQ14689 1571 aa30.69■■■□□ 2.5
LMBR1-219ENST00000498034 MSH6P52701 1360 aa30.68■■■□□ 2.5
LMBR1-219ENST00000498034 ZNF326Q5BKZ1 582 aaKnown RBP30.68■■■□□ 2.5
LMBR1-219ENST00000498034 CLTCL1P53675 1640 aa30.67■■■□□ 2.5
LMBR1-219ENST00000498034 ROBO1Q9Y6N7 1651 aa30.65■■■□□ 2.5
LMBR1-219ENST00000498034 TRPM2O94759 1503 aa30.64■■■□□ 2.5
LMBR1-219ENST00000498034 PIK3R4Q99570 1358 aa30.64■■■□□ 2.5
LMBR1-219ENST00000498034 PTPRUQ92729 1446 aa30.6■■■□□ 2.49
LMBR1-219ENST00000498034 SLAIN2Q9P270 581 aa30.6■■■□□ 2.49
LMBR1-219ENST00000498034 NRXN3Q9Y4C0 1643 aa30.6■■■□□ 2.49
LMBR1-219ENST00000498034 AMOTL2Q9Y2J4 779 aa30.59■■■□□ 2.49
LMBR1-219ENST00000498034 NCOA3Q9Y6Q9 1424 aa30.58■■■□□ 2.49
LMBR1-219ENST00000498034 C14orf37Q86TY3 774 aa30.58■■■□□ 2.49
LMBR1-219ENST00000498034 PHF23Q9BUL5 403 aaPredicted RBP30.58■■■□□ 2.49
LMBR1-219ENST00000498034 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
LMBR1-219ENST00000498034 SETBP1Q9Y6X0 1596 aa30.58■■■□□ 2.49
LMBR1-219ENST00000498034 KIF1BO60333 1816 aa30.57■■■□□ 2.48
LMBR1-219ENST00000498034 NEXMIFQ5QGS0 1516 aa30.56■■■□□ 2.48
LMBR1-219ENST00000498034 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.47
LMBR1-219ENST00000498034 C19orf44Q9H6X5 657 aa30.51■■■□□ 2.47
LMBR1-219ENST00000498034 METP08581 1390 aa30.51■■■□□ 2.47
LMBR1-219ENST00000498034 XRN1Q8IZH2 1706 aaKnown RBP30.48■■■□□ 2.47
LMBR1-219ENST00000498034 FOXD1Q16676 465 aa30.48■■■□□ 2.47
LMBR1-219ENST00000498034 CADPS2Q86UW7 1296 aa30.47■■■□□ 2.47
LMBR1-219ENST00000498034 ATF3P18847 181 aa30.46■■■□□ 2.47
LMBR1-219ENST00000498034 PHLPP1O60346 1717 aa30.46■■■□□ 2.47
LMBR1-219ENST00000498034 VGFO15240 615 aaPredicted RBP30.41■■■□□ 2.46
LMBR1-219ENST00000498034 RGS17Q9UGC6 210 aaPredicted RBP30.4■■■□□ 2.46
LMBR1-219ENST00000498034 RPGRIP1LQ68CZ1 1315 aa30.39■■■□□ 2.46
LMBR1-219ENST00000498034 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
LMBR1-219ENST00000498034 COL16A1Q07092 1604 aaPredicted RBP30.36■■■□□ 2.45
LMBR1-219ENST00000498034 JCADQ9P266 1359 aa30.35■■■□□ 2.45
LMBR1-219ENST00000498034 DCCP43146 1447 aa30.35■■■□□ 2.45
LMBR1-219ENST00000498034 PPLO60437 1756 aa30.35■■■□□ 2.45
LMBR1-219ENST00000498034 SETD1AO15047 1707 aaKnown RBP30.34■■■□□ 2.45
LMBR1-219ENST00000498034 BRINP3Q76B58 766 aa30.32■■■□□ 2.44
LMBR1-219ENST00000498034 CCDC144AA2RUR9 1427 aa30.31■■■□□ 2.44
LMBR1-219ENST00000498034 AHDC1Q5TGY3 1603 aaPredicted RBP30.31■■■□□ 2.44
LMBR1-219ENST00000498034 ADGRL3Q9HAR2 1447 aa30.3■■■□□ 2.44
LMBR1-219ENST00000498034 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
LMBR1-219ENST00000498034 MST1RQ04912 1400 aa30.29■■■□□ 2.44
LMBR1-219ENST00000498034 SETD5Q9C0A6 1442 aa30.28■■■□□ 2.44
LMBR1-219ENST00000498034 NALCNQ8IZF0 1738 aa30.27■■■□□ 2.44
LMBR1-219ENST00000498034 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
LMBR1-219ENST00000498034 ROBO2Q9HCK4 1378 aa30.25■■■□□ 2.43
LMBR1-219ENST00000498034 ADGRF5Q8IZF2 1346 aa30.24■■■□□ 2.43
LMBR1-219ENST00000498034 PTCH1Q13635 1447 aa30.24■■■□□ 2.43
LMBR1-219ENST00000498034 ASXL1Q8IXJ9 1541 aa30.24■■■□□ 2.43
LMBR1-219ENST00000498034 POTEAQ6S8J7 498 aa30.23■■■□□ 2.43
LMBR1-219ENST00000498034 SPATA31A6Q5VVP1 1343 aa30.2■■■□□ 2.42
LMBR1-219ENST00000498034 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.42
LMBR1-219ENST00000498034 IFT172Q9UG01 1749 aa30.19■■■□□ 2.42
LMBR1-219ENST00000498034 LRP6O75581 1613 aa30.18■■■□□ 2.42
LMBR1-219ENST00000498034 SHPRHQ149N8 1683 aa30.18■■■□□ 2.42
LMBR1-219ENST00000498034 PRAG1Q86YV5 1406 aa30.18■■■□□ 2.42
LMBR1-219ENST00000498034 RAB3GAP2Q9H2M9 1393 aa30.17■■■□□ 2.42
LMBR1-219ENST00000498034 ANKRD30BQ9BXX2 1392 aa30.16■■■□□ 2.42
LMBR1-219ENST00000498034 NHSL1Q5SYE7 1610 aa30.16■■■□□ 2.42
LMBR1-219ENST00000498034 DDX17Q92841 729 aaKnown RBP30.16■■■□□ 2.42
LMBR1-219ENST00000498034 C1orf167Q5SNV9 1468 aa30.14■■■□□ 2.42
LMBR1-219ENST00000498034 MEX3CQ5U5Q3 659 aaKnown RBP30.12■■■□□ 2.41
LMBR1-219ENST00000498034 STK26Q9P289 416 aa30.1■■■□□ 2.41
LMBR1-219ENST00000498034 NUTM2BA6NNL0 878 aaPredicted RBP30.09■■■□□ 2.41
LMBR1-219ENST00000498034 NUTM2EB1AL46 878 aaPredicted RBP30.09■■■□□ 2.41
LMBR1-219ENST00000498034 TMEM132EQ6IEE7 984 aa30.09■■■□□ 2.41
LMBR1-219ENST00000498034 NUTM2AQ8IVF1 878 aaPredicted RBP30.09■■■□□ 2.41
LMBR1-219ENST00000498034 LRRC59Q96AG4 307 aaKnown RBP30.09■■■□□ 2.41
LMBR1-219ENST00000498034 PIK3C2GO75747 1445 aa30.08■■■□□ 2.41
LMBR1-219ENST00000498034 ORAI2Q96SN7 254 aa30.08■■■□□ 2.41
LMBR1-219ENST00000498034 LRPPRCP42704 1394 aaKnown RBP30.05■■■□□ 2.4
LMBR1-219ENST00000498034 WAPLQ7Z5K2 1190 aa30.05■■■□□ 2.4
LMBR1-219ENST00000498034 TECPR2O15040 1411 aa30.03■■■□□ 2.4
LMBR1-219ENST00000498034 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms