RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ILDR2Q71H61 639 aa17.97■□□□□ 0.47
NUDCD3-211ENST00000497978 BCANQ96GW7 911 aa17.96■□□□□ 0.47
NUDCD3-211ENST00000497978 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
NUDCD3-211ENST00000497978 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
NUDCD3-211ENST00000497978 KCNA6P17658 529 aa17.93■□□□□ 0.46
NUDCD3-211ENST00000497978 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
NUDCD3-211ENST00000497978 NUP155O75694 1391 aa17.92■□□□□ 0.46
NUDCD3-211ENST00000497978 PPP1R15AO75807 674 aaPredicted RBP17.92■□□□□ 0.46
NUDCD3-211ENST00000497978 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
NUDCD3-211ENST00000497978 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
NUDCD3-211ENST00000497978 E9PCH4 1651 aa17.9■□□□□ 0.46
NUDCD3-211ENST00000497978 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.46
NUDCD3-211ENST00000497978 MYO5BQ9ULV0 1848 aa17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 SOCS7O14512 581 aa17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 TMEM131LA2VDJ0 1609 aa17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
NUDCD3-211ENST00000497978 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
NUDCD3-211ENST00000497978 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
NUDCD3-211ENST00000497978 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
NUDCD3-211ENST00000497978 PLEKHG1Q9ULL1 1385 aa17.88■□□□□ 0.45
NUDCD3-211ENST00000497978 MED1Q15648 1581 aaPredicted RBP17.86■□□□□ 0.45
NUDCD3-211ENST00000497978 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
NUDCD3-211ENST00000497978 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
NUDCD3-211ENST00000497978 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
NUDCD3-211ENST00000497978 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.45
NUDCD3-211ENST00000497978 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
NUDCD3-211ENST00000497978 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
NUDCD3-211ENST00000497978 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
NUDCD3-211ENST00000497978 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
NUDCD3-211ENST00000497978 MSH6P52701 1360 aa17.8■□□□□ 0.44
NUDCD3-211ENST00000497978 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
NUDCD3-211ENST00000497978 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
NUDCD3-211ENST00000497978 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
NUDCD3-211ENST00000497978 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.44
NUDCD3-211ENST00000497978 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
NUDCD3-211ENST00000497978 NAIPQ13075 1403 aa17.75■□□□□ 0.43
NUDCD3-211ENST00000497978 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
NUDCD3-211ENST00000497978 ZNF326Q5BKZ1 582 aaKnown RBP17.75■□□□□ 0.43
NUDCD3-211ENST00000497978 C14orf37Q86TY3 774 aa17.75■□□□□ 0.43
NUDCD3-211ENST00000497978 NCOA3Q9Y6Q9 1424 aa17.74■□□□□ 0.43
NUDCD3-211ENST00000497978 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
NUDCD3-211ENST00000497978 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
NUDCD3-211ENST00000497978 TRPM2O94759 1503 aa17.72■□□□□ 0.43
NUDCD3-211ENST00000497978 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
NUDCD3-211ENST00000497978 AMOTL2Q9Y2J4 779 aa17.7■□□□□ 0.42
NUDCD3-211ENST00000497978 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
NUDCD3-211ENST00000497978 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
NUDCD3-211ENST00000497978 ATF3P18847 181 aa17.68■□□□□ 0.42
NUDCD3-211ENST00000497978 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
NUDCD3-211ENST00000497978 CLTCL1P53675 1640 aa17.68■□□□□ 0.42
NUDCD3-211ENST00000497978 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
NUDCD3-211ENST00000497978 KIF1BO60333 1816 aa17.67■□□□□ 0.42
NUDCD3-211ENST00000497978 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
NUDCD3-211ENST00000497978 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
NUDCD3-211ENST00000497978 PHLPP1O60346 1717 aa17.65■□□□□ 0.42
NUDCD3-211ENST00000497978 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
NUDCD3-211ENST00000497978 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
NUDCD3-211ENST00000497978 NEXMIFQ5QGS0 1516 aa17.63■□□□□ 0.41
NUDCD3-211ENST00000497978 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
NUDCD3-211ENST00000497978 JCADQ9P266 1359 aa17.62■□□□□ 0.41
NUDCD3-211ENST00000497978 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
NUDCD3-211ENST00000497978 METP08581 1390 aa17.61■□□□□ 0.41
NUDCD3-211ENST00000497978 DCCP43146 1447 aa17.6■□□□□ 0.41
NUDCD3-211ENST00000497978 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
NUDCD3-211ENST00000497978 RGS17Q9UGC6 210 aaPredicted RBP17.59■□□□□ 0.41
NUDCD3-211ENST00000497978 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
NUDCD3-211ENST00000497978 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
NUDCD3-211ENST00000497978 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
NUDCD3-211ENST00000497978 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
NUDCD3-211ENST00000497978 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
NUDCD3-211ENST00000497978 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
NUDCD3-211ENST00000497978 MPHOSPH9Q99550 1183 aa17.52■□□□□ 0.4
NUDCD3-211ENST00000497978 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
NUDCD3-211ENST00000497978 MST1RQ04912 1400 aa17.52■□□□□ 0.4
NUDCD3-211ENST00000497978 PPLO60437 1756 aa17.51■□□□□ 0.39
NUDCD3-211ENST00000497978 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
NUDCD3-211ENST00000497978 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
NUDCD3-211ENST00000497978 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
NUDCD3-211ENST00000497978 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
NUDCD3-211ENST00000497978 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
NUDCD3-211ENST00000497978 SETD1AO15047 1707 aaKnown RBP17.48■□□□□ 0.39
NUDCD3-211ENST00000497978 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
NUDCD3-211ENST00000497978 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
NUDCD3-211ENST00000497978 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
NUDCD3-211ENST00000497978 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
NUDCD3-211ENST00000497978 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
NUDCD3-211ENST00000497978 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
NUDCD3-211ENST00000497978 LRP6O75581 1613 aa17.45■□□□□ 0.38
NUDCD3-211ENST00000497978 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
NUDCD3-211ENST00000497978 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
NUDCD3-211ENST00000497978 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
NUDCD3-211ENST00000497978 NUTM2BA6NNL0 878 aaPredicted RBP17.44■□□□□ 0.38
NUDCD3-211ENST00000497978 NUTM2EB1AL46 878 aaPredicted RBP17.44■□□□□ 0.38
NUDCD3-211ENST00000497978 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
NUDCD3-211ENST00000497978 NUTM2AQ8IVF1 878 aaPredicted RBP17.44■□□□□ 0.38
NUDCD3-211ENST00000497978 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
NUDCD3-211ENST00000497978 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
NUDCD3-211ENST00000497978 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms