RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 C3orf80F5H4A9 247 aa14.36□□□□□ -0.11
GARNL3-221ENST00000497703 POTEEQ6S8J3 1075 aa14.36□□□□□ -0.11
GARNL3-221ENST00000497703 VPS9D1Q9Y2B5 631 aa14.36□□□□□ -0.11
GARNL3-221ENST00000497703 SH3D19Q5HYK7 790 aa14.35□□□□□ -0.11
GARNL3-221ENST00000497703 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
GARNL3-221ENST00000497703 RDH13Q8NBN7 331 aa14.34□□□□□ -0.11
GARNL3-221ENST00000497703 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
GARNL3-221ENST00000497703 TK2O00142 265 aa14.33□□□□□ -0.12
GARNL3-221ENST00000497703 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
GARNL3-221ENST00000497703 STAC3Q96MF2 364 aa14.33□□□□□ -0.12
GARNL3-221ENST00000497703 LAPTM4BQ86VI4 370 aa14.32□□□□□ -0.12
GARNL3-221ENST00000497703 NUTM1Q86Y26 1132 aa14.32□□□□□ -0.12
GARNL3-221ENST00000497703 SKIV2LQ15477 1246 aaKnown RBP14.31□□□□□ -0.12
GARNL3-221ENST00000497703 CD46P15529 392 aa14.3□□□□□ -0.12
GARNL3-221ENST00000497703 LSM11P83369 360 aaKnown RBP eCLIP14.29□□□□□ -0.12
GARNL3-221ENST00000497703 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
GARNL3-221ENST00000497703 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
GARNL3-221ENST00000497703 TBC1D2Q9BYX2 928 aa14.28□□□□□ -0.12
GARNL3-221ENST00000497703 SLF2Q8IX21 1173 aa14.27□□□□□ -0.13
GARNL3-221ENST00000497703 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
GARNL3-221ENST00000497703 MYSM1Q5VVJ2 828 aa14.25□□□□□ -0.13
GARNL3-221ENST00000497703 ADGRD1Q6QNK2 874 aa14.25□□□□□ -0.13
GARNL3-221ENST00000497703 POLR3EQ9NVU0 708 aa14.25□□□□□ -0.13
GARNL3-221ENST00000497703 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
GARNL3-221ENST00000497703 GOLGA8CPA6NN73 597 aa14.24□□□□□ -0.13
GARNL3-221ENST00000497703 RNF40O75150 1001 aa14.24□□□□□ -0.13
GARNL3-221ENST00000497703 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
GARNL3-221ENST00000497703 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
GARNL3-221ENST00000497703 CLK2P49760 499 aaKnown RBP14.22□□□□□ -0.13
GARNL3-221ENST00000497703 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
GARNL3-221ENST00000497703 SPIRE2Q8WWL2 714 aa14.22□□□□□ -0.13
GARNL3-221ENST00000497703 BHMG1C9JSJ3 638 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-221ENST00000497703 LCE2DQ5TA82 110 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-221ENST00000497703 SAMD7Q7Z3H4 446 aa14.21□□□□□ -0.13
GARNL3-221ENST00000497703 KDM4AO75164 1064 aa14.2□□□□□ -0.14
GARNL3-221ENST00000497703 USP46P62068 366 aa14.2□□□□□ -0.14
GARNL3-221ENST00000497703 ZFRQ96KR1 1074 aaKnown RBP14.2□□□□□ -0.14
GARNL3-221ENST00000497703 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
GARNL3-221ENST00000497703 GCGRP47871 477 aa14.18□□□□□ -0.14
GARNL3-221ENST00000497703 RIC3Q7Z5B4 369 aa14.18□□□□□ -0.14
GARNL3-221ENST00000497703 FLIIQ13045 1269 aa14.17□□□□□ -0.14
GARNL3-221ENST00000497703 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
GARNL3-221ENST00000497703 PROCA1Q8NCQ7 364 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-221ENST00000497703 ANKK1Q8NFD2 765 aa14.15□□□□□ -0.14
GARNL3-221ENST00000497703 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-221ENST00000497703 GJA5P36382 358 aa14.14□□□□□ -0.15
GARNL3-221ENST00000497703 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
GARNL3-221ENST00000497703 SLC10A3P09131 477 aa14.13□□□□□ -0.15
GARNL3-221ENST00000497703 SPTLC1O15269 473 aa14.12□□□□□ -0.15
GARNL3-221ENST00000497703 CFHP08603 1231 aa14.12□□□□□ -0.15
GARNL3-221ENST00000497703 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
GARNL3-221ENST00000497703 HRO43593 1189 aa14.11□□□□□ -0.15
GARNL3-221ENST00000497703 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
GARNL3-221ENST00000497703 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
GARNL3-221ENST00000497703 PRR14Q9BWN1 585 aa14.11□□□□□ -0.15
GARNL3-221ENST00000497703 TUSC1Q2TAM9 212 aa14.1□□□□□ -0.15
GARNL3-221ENST00000497703 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
GARNL3-221ENST00000497703 LIMD1Q9UGP4 676 aa14.09□□□□□ -0.15
GARNL3-221ENST00000497703 HOXA2O43364 376 aa14.08□□□□□ -0.16
GARNL3-221ENST00000497703 NUTM2BA6NNL0 878 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-221ENST00000497703 NUTM2EB1AL46 878 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-221ENST00000497703 NDUFV2P19404 249 aa14.07□□□□□ -0.16
GARNL3-221ENST00000497703 NUTM2DQ5VT03 806 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-221ENST00000497703 NUTM2AQ8IVF1 878 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-221ENST00000497703 FDX1P10109 184 aa14.06□□□□□ -0.16
GARNL3-221ENST00000497703 PPP4CP60510 307 aa14.06□□□□□ -0.16
GARNL3-221ENST00000497703 WNT2BQ93097 391 aa14.06□□□□□ -0.16
GARNL3-221ENST00000497703 SOWAHBA6NEL2 793 aa14.04□□□□□ -0.16
GARNL3-221ENST00000497703 FUT2Q10981 343 aa14.04□□□□□ -0.16
GARNL3-221ENST00000497703 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
GARNL3-221ENST00000497703 ATP6V1AP38606 617 aa14.03□□□□□ -0.16
GARNL3-221ENST00000497703 PRPF38BQ5VTL8 546 aaKnown RBP14.03□□□□□ -0.16
GARNL3-221ENST00000497703 ZBTB3Q9H5J0 574 aa14.03□□□□□ -0.16
GARNL3-221ENST00000497703 RFC5P40937 340 aa14.02□□□□□ -0.17
GARNL3-221ENST00000497703 PPP2R2DQ66LE6 453 aa14.01□□□□□ -0.17
GARNL3-221ENST00000497703 TSR3Q9UJK0 312 aaKnown RBP14.01□□□□□ -0.17
GARNL3-221ENST00000497703 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
GARNL3-221ENST00000497703 BANK1Q8NDB2 785 aa13.99□□□□□ -0.17
GARNL3-221ENST00000497703 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
GARNL3-221ENST00000497703 LILRB3O75022 631 aa13.98□□□□□ -0.17
GARNL3-221ENST00000497703 BCAMP50895 628 aa13.98□□□□□ -0.17
GARNL3-221ENST00000497703 ZMYND15Q9H091 742 aa13.98□□□□□ -0.17
GARNL3-221ENST00000497703 PCDHB15Q9Y5E8 787 aa13.98□□□□□ -0.17
GARNL3-221ENST00000497703 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
GARNL3-221ENST00000497703 MTMR2Q13614 643 aa13.97□□□□□ -0.17
GARNL3-221ENST00000497703 QPCTQ16769 361 aa13.97□□□□□ -0.17
GARNL3-221ENST00000497703 KRTAP3-3Q9BYR6 98 aa13.97□□□□□ -0.17
GARNL3-221ENST00000497703 KRTAP3-2Q9BYR7 98 aa13.97□□□□□ -0.17
GARNL3-221ENST00000497703 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
GARNL3-221ENST00000497703 C6orf229H3BNL8 230 aa13.96□□□□□ -0.17
GARNL3-221ENST00000497703 APBB1O00213 710 aa13.96□□□□□ -0.17
GARNL3-221ENST00000497703 MCM6Q14566 821 aa13.96□□□□□ -0.17
GARNL3-221ENST00000497703 HRCP23327 699 aa13.95□□□□□ -0.18
GARNL3-221ENST00000497703 GUCA2AQ02747 115 aa13.95□□□□□ -0.18
GARNL3-221ENST00000497703 Q3C1V9 767 aa13.95□□□□□ -0.18
GARNL3-221ENST00000497703 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
GARNL3-221ENST00000497703 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
GARNL3-221ENST00000497703 RAD21O60216 631 aa13.93□□□□□ -0.18
GARNL3-221ENST00000497703 AP1G2O75843 785 aa13.93□□□□□ -0.18
GARNL3-221ENST00000497703 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms