RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 IDI1Q13907 227 aa17.12■□□□□ 0.33
HPS1-213ENST00000497527 USP47Q96K76 1375 aa17.12■□□□□ 0.33
HPS1-213ENST00000497527 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
HPS1-213ENST00000497527 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
HPS1-213ENST00000497527 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
HPS1-213ENST00000497527 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
HPS1-213ENST00000497527 TNRQ92752 1358 aa17.09■□□□□ 0.33
HPS1-213ENST00000497527 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
HPS1-213ENST00000497527 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
HPS1-213ENST00000497527 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
HPS1-213ENST00000497527 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
HPS1-213ENST00000497527 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
HPS1-213ENST00000497527 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
HPS1-213ENST00000497527 PIK3C2GO75747 1445 aa17.05■□□□□ 0.32
HPS1-213ENST00000497527 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
HPS1-213ENST00000497527 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
HPS1-213ENST00000497527 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
HPS1-213ENST00000497527 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
HPS1-213ENST00000497527 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
HPS1-213ENST00000497527 SCAF11Q99590 1463 aaKnown RBP17.03■□□□□ 0.32
HPS1-213ENST00000497527 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
HPS1-213ENST00000497527 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.32
HPS1-213ENST00000497527 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
HPS1-213ENST00000497527 ABCF1Q8NE71 845 aaKnown RBP eCLIP17■□□□□ 0.31
HPS1-213ENST00000497527 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
HPS1-213ENST00000497527 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
HPS1-213ENST00000497527 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
HPS1-213ENST00000497527 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
HPS1-213ENST00000497527 RIMS2Q9UQ26 1411 aa16.98■□□□□ 0.31
HPS1-213ENST00000497527 ST20-MTHFSA0A0A6YYL1 179 aa16.96■□□□□ 0.31
HPS1-213ENST00000497527 CFAP70Q5T0N1 1121 aa16.96■□□□□ 0.31
HPS1-213ENST00000497527 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
HPS1-213ENST00000497527 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
HPS1-213ENST00000497527 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
HPS1-213ENST00000497527 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
HPS1-213ENST00000497527 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
HPS1-213ENST00000497527 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
HPS1-213ENST00000497527 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
HPS1-213ENST00000497527 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
HPS1-213ENST00000497527 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
HPS1-213ENST00000497527 SLIT1O75093 1534 aa16.91■□□□□ 0.3
HPS1-213ENST00000497527 TMF1P82094 1093 aa16.91■□□□□ 0.3
HPS1-213ENST00000497527 SETD1AO15047 1707 aaKnown RBP16.9■□□□□ 0.3
HPS1-213ENST00000497527 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
HPS1-213ENST00000497527 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
HPS1-213ENST00000497527 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.3
HPS1-213ENST00000497527 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
HPS1-213ENST00000497527 ARHGAP23Q9P227 1491 aa16.89■□□□□ 0.29
HPS1-213ENST00000497527 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
HPS1-213ENST00000497527 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
HPS1-213ENST00000497527 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
HPS1-213ENST00000497527 TESK2Q96S53 571 aa16.87■□□□□ 0.29
HPS1-213ENST00000497527 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
HPS1-213ENST00000497527 NRXN3Q9Y4C0 1643 aa16.87■□□□□ 0.29
HPS1-213ENST00000497527 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
HPS1-213ENST00000497527 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
HPS1-213ENST00000497527 PTPRMP28827 1452 aa16.86■□□□□ 0.29
HPS1-213ENST00000497527 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
HPS1-213ENST00000497527 CENPJQ9HC77 1338 aaPredicted RBP16.85■□□□□ 0.29
HPS1-213ENST00000497527 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
HPS1-213ENST00000497527 ANP32CO43423 234 aa16.84■□□□□ 0.29
HPS1-213ENST00000497527 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
HPS1-213ENST00000497527 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
HPS1-213ENST00000497527 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
HPS1-213ENST00000497527 MIER1Q8N108 512 aa16.83■□□□□ 0.28
HPS1-213ENST00000497527 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
HPS1-213ENST00000497527 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
HPS1-213ENST00000497527 TRAK1Q9UPV9 953 aa16.82■□□□□ 0.28
HPS1-213ENST00000497527 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
HPS1-213ENST00000497527 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
HPS1-213ENST00000497527 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
HPS1-213ENST00000497527 BCANQ96GW7 911 aa16.79■□□□□ 0.28
HPS1-213ENST00000497527 ABCC11Q96J66 1382 aa16.77■□□□□ 0.28
HPS1-213ENST00000497527 CPS1P31327 1500 aa16.76■□□□□ 0.27
HPS1-213ENST00000497527 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
HPS1-213ENST00000497527 TECPR2O15040 1411 aa16.76■□□□□ 0.27
HPS1-213ENST00000497527 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
HPS1-213ENST00000497527 MYOM1P52179 1685 aa16.75■□□□□ 0.27
HPS1-213ENST00000497527 MED14O60244 1454 aa16.75■□□□□ 0.27
HPS1-213ENST00000497527 LTKP29376 864 aa16.75■□□□□ 0.27
HPS1-213ENST00000497527 SIRT1Q96EB6 747 aa16.75■□□□□ 0.27
HPS1-213ENST00000497527 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
HPS1-213ENST00000497527 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
HPS1-213ENST00000497527 ANKLE2Q86XL3 938 aa16.74■□□□□ 0.27
HPS1-213ENST00000497527 POGKQ9P215 609 aa16.74■□□□□ 0.27
HPS1-213ENST00000497527 STK26Q9P289 416 aa16.74■□□□□ 0.27
HPS1-213ENST00000497527 FAM135BQ49AJ0 1406 aa16.73■□□□□ 0.27
HPS1-213ENST00000497527 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
HPS1-213ENST00000497527 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
HPS1-213ENST00000497527 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
HPS1-213ENST00000497527 METP08581 1390 aa16.71■□□□□ 0.27
HPS1-213ENST00000497527 TULP4Q9NRJ4 1543 aa16.7■□□□□ 0.26
HPS1-213ENST00000497527 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
HPS1-213ENST00000497527 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
HPS1-213ENST00000497527 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
HPS1-213ENST00000497527 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
HPS1-213ENST00000497527 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
HPS1-213ENST00000497527 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
HPS1-213ENST00000497527 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
HPS1-213ENST00000497527 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms