RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 UBAP1LF5GYI3 381 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHF14O94880 888 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 SSTR3P32745 418 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 TMEM259Q4ZIN3 620 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 MYSM1Q5VVJ2 828 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 DPY19L2Q6NUT2 758 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 CCDC97Q96F63 343 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 POM121Q96HA1 1249 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PCDH10Q9P2E7 1040 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 BOLA1Q9Y3E2 137 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PTPRTO14522 1441 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZCCHC6Q5VYS8 1495 aaKnown RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PPRC1Q5VV67 1664 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 RAD21O60216 631 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 EVI5O60447 810 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 SRPK2P78362 688 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 RETREG2Q8NC44 543 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 UPF1Q92900 1129 aaKnown RBP eCLIP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 TRIM35Q9UPQ4 493 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 TARBP1Q13395 1621 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 ADAMTSL3P82987 1691 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 YEATS2Q9ULM3 1422 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 OATP04181 439 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 RFC5P40937 340 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 IRF5Q13568 498 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TMEM92Q6UXU6 159 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 CHRDL2Q6WN34 429 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 METTL3Q86U44 580 aaKnown RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 BEGAINQ9BUH8 593 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 OCEL1Q9H607 264 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZNF777Q9ULD5 760 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 USTQ9Y2C2 406 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 MAGI1Q96QZ7 1491 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TOPBP1Q92547 1522 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TDRD9Q8NDG6 1382 aaKnown RBP4.15□□□□□ -1.74
CKS1BP2-201ENST00000497342 CEP170Q5SW79 1584 aa4.15□□□□□ -1.74
CKS1BP2-201ENST00000497342 CLK2P49760 499 aaKnown RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 KCNA1Q09470 495 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 ASTLQ6HA08 431 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 POTEAQ6S8J7 498 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 PROCA1Q8NCQ7 364 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 PXYLP1Q8TE99 480 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 AMOTL2Q9Y2J4 779 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 BRD1O95696 1058 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 FBXO31Q5XUX0 539 aaPredicted RBP4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 MTMR14Q8NCE2 650 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 DDX12PQ92771 950 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 FBXW7Q969H0 707 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 SPTLC1O15269 473 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 MDM2Q00987 491 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 TMCO4Q5TGY1 634 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 L3MBTL3Q96JM7 780 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 CDHR5Q9HBB8 845 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 SNRKQ9NRH2 765 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 ZNF330Q9Y3S2 320 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 ADGRG1Q9Y653 693 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 MROH2BQ7Z745 1585 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 GLI2P10070 1586 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 MFAP1P55081 439 aaKnown RBP4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 SLAIN1Q8ND83 568 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 JPH4Q96JJ6 628 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 PCDHGA10Q9Y5H3 936 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 KIF21BO75037 1637 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 GPR37L1O60883 481 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 TYW1BQ6NUM6 668 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 PBXIP1Q96AQ6 731 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 RBM33Q96EV2 1170 aaKnown RBP4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 TBC1D2Q9BYX2 928 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 STRCQ7RTU9 1775 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 ABCC8Q09428 1581 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ADCY10Q96PN6 1610 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ATMINO43313 823 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 LILRB3O75022 631 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 CD46P15529 392 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ATN1P54259 1190 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 PRPF38BQ5VTL8 546 aaKnown RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 LIMD1Q9UGP4 676 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 MTMR7Q9Y216 660 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 TEX14Q8IWB6 1497 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 SHROOM2Q13796 1616 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 CFAP70Q5T0N1 1121 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 RSBN1LQ6PCB5 846 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 WWC1Q8IX03 1113 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GLMNQ92990 594 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GJD4Q96KN9 370 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GNEQ9Y223 722 aaKnown RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GRIN2BQ13224 1484 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 MADDQ8WXG6 1647 aa4.09□□□□□ -1.76
CKS1BP2-201ENST00000497342 SETD1AO15047 1707 aaKnown RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 GALR2O43603 387 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 FOSBP53539 338 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PIP4K2BP78356 416 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 RIC3Q7Z5B4 369 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 SPIRE2Q8WWL2 714 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRG4Q92954 1404 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 GZF1Q9H116 711 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRM3Q9NNZ6 103 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 IGSF5Q9NSI5 407 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms