RNA–Protein interactions for RNA: ENST00000497305.1

SHOC2-207, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 1 (best)

Gene SHOC2, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-207ENST00000497305 S1PR4O95977 384 aa9.77□□□□□ -0.85
SHOC2-207ENST00000497305 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
SHOC2-207ENST00000497305 TRIM47Q96LD4 638 aa9.77□□□□□ -0.85
SHOC2-207ENST00000497305 PDE4AP27815 886 aa9.76□□□□□ -0.85
SHOC2-207ENST00000497305 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
SHOC2-207ENST00000497305 ATP13A2Q9NQ11 1180 aa9.75□□□□□ -0.85
SHOC2-207ENST00000497305 ECM2O94769 699 aaPredicted RBP9.73□□□□□ -0.85
SHOC2-207ENST00000497305 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
SHOC2-207ENST00000497305 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
SHOC2-207ENST00000497305 TATDN2Q93075 761 aa9.73□□□□□ -0.85
SHOC2-207ENST00000497305 KRTAP9-6A0A140TA67 174 aa9.72□□□□□ -0.85
SHOC2-207ENST00000497305 BLOC1S3Q6QNY0 202 aa9.72□□□□□ -0.85
SHOC2-207ENST00000497305 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
SHOC2-207ENST00000497305 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.86
SHOC2-207ENST00000497305 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
SHOC2-207ENST00000497305 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
SHOC2-207ENST00000497305 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
SHOC2-207ENST00000497305 NECTIN2Q92692 538 aa9.68□□□□□ -0.86
SHOC2-207ENST00000497305 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
SHOC2-207ENST00000497305 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
SHOC2-207ENST00000497305 PRSS12P56730 875 aa9.67□□□□□ -0.86
SHOC2-207ENST00000497305 MFSD10Q14728 455 aa9.66□□□□□ -0.86
SHOC2-207ENST00000497305 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
SHOC2-207ENST00000497305 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
SHOC2-207ENST00000497305 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
SHOC2-207ENST00000497305 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
SHOC2-207ENST00000497305 KRTAP1-3Q8IUG1 177 aa9.64□□□□□ -0.87
SHOC2-207ENST00000497305 IRF7Q92985 503 aa9.64□□□□□ -0.87
SHOC2-207ENST00000497305 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
SHOC2-207ENST00000497305 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
SHOC2-207ENST00000497305 DDX12PQ92771 950 aa9.62□□□□□ -0.87
SHOC2-207ENST00000497305 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
SHOC2-207ENST00000497305 MAP3K7O43318 606 aa9.61□□□□□ -0.87
SHOC2-207ENST00000497305 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
SHOC2-207ENST00000497305 SLF2Q8IX21 1173 aa9.61□□□□□ -0.87
SHOC2-207ENST00000497305 TMEM151AQ8N4L1 468 aa9.59□□□□□ -0.87
SHOC2-207ENST00000497305 VEGFBP49765 207 aa9.58□□□□□ -0.88
SHOC2-207ENST00000497305 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
SHOC2-207ENST00000497305 PSMG3-AS1Q96PY0 264 aa9.58□□□□□ -0.88
SHOC2-207ENST00000497305 ADH1BP00325 375 aa9.57□□□□□ -0.88
SHOC2-207ENST00000497305 GDF11O95390 407 aa9.56□□□□□ -0.88
SHOC2-207ENST00000497305 NPAS3Q8IXF0 933 aa9.56□□□□□ -0.88
SHOC2-207ENST00000497305 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
SHOC2-207ENST00000497305 H3BM21 787 aa9.55□□□□□ -0.88
SHOC2-207ENST00000497305 SMPD1P17405 629 aa9.55□□□□□ -0.88
SHOC2-207ENST00000497305 NBR1Q14596 966 aa9.55□□□□□ -0.88
SHOC2-207ENST00000497305 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
SHOC2-207ENST00000497305 RASSF7Q02833 373 aa9.54□□□□□ -0.88
SHOC2-207ENST00000497305 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
SHOC2-207ENST00000497305 RPIAP49247 311 aa9.52□□□□□ -0.89
SHOC2-207ENST00000497305 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
SHOC2-207ENST00000497305 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
SHOC2-207ENST00000497305 DPYSL4O14531 572 aa9.51□□□□□ -0.89
SHOC2-207ENST00000497305 PKD2Q13563 968 aa9.49□□□□□ -0.89
SHOC2-207ENST00000497305 CERKQ8TCT0 537 aa9.49□□□□□ -0.89
SHOC2-207ENST00000497305 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
SHOC2-207ENST00000497305 GPAT2Q6NUI2 795 aa9.44□□□□□ -0.9
SHOC2-207ENST00000497305 CD2BP2O95400 341 aaKnown RBP9.43□□□□□ -0.9
SHOC2-207ENST00000497305 J3QL48 77 aa9.42□□□□□ -0.9
SHOC2-207ENST00000497305 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
SHOC2-207ENST00000497305 HPS1Q92902 700 aa9.42□□□□□ -0.9
SHOC2-207ENST00000497305 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
SHOC2-207ENST00000497305 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
SHOC2-207ENST00000497305 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
SHOC2-207ENST00000497305 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
SHOC2-207ENST00000497305 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
SHOC2-207ENST00000497305 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
SHOC2-207ENST00000497305 IGHA1P01876 353 aa9.38□□□□□ -0.91
SHOC2-207ENST00000497305 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
SHOC2-207ENST00000497305 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
SHOC2-207ENST00000497305 LCE3BQ5TA77 95 aa9.36□□□□□ -0.91
SHOC2-207ENST00000497305 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
SHOC2-207ENST00000497305 WNT7AO00755 349 aa9.35□□□□□ -0.91
SHOC2-207ENST00000497305 NR1I2O75469 434 aa9.35□□□□□ -0.91
SHOC2-207ENST00000497305 DNMT3AQ9Y6K1 912 aaPredicted RBP9.35□□□□□ -0.91
SHOC2-207ENST00000497305 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
SHOC2-207ENST00000497305 VSIG8P0DPA2 414 aa9.34□□□□□ -0.91
SHOC2-207ENST00000497305 EYA1Q99502 592 aa9.34□□□□□ -0.91
SHOC2-207ENST00000497305 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
SHOC2-207ENST00000497305 ADAM23O75077 832 aa9.32□□□□□ -0.92
SHOC2-207ENST00000497305 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
SHOC2-207ENST00000497305 BMP1P13497 986 aa9.31□□□□□ -0.92
SHOC2-207ENST00000497305 PADI6Q6TGC4 694 aa9.31□□□□□ -0.92
SHOC2-207ENST00000497305 SPSB2Q99619 263 aa9.31□□□□□ -0.92
SHOC2-207ENST00000497305 CFHP08603 1231 aa9.3□□□□□ -0.92
SHOC2-207ENST00000497305 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
SHOC2-207ENST00000497305 MRGPRX2Q96LB1 330 aa9.3□□□□□ -0.92
SHOC2-207ENST00000497305 ADAMTS8Q9UP79 889 aa9.29□□□□□ -0.92
SHOC2-207ENST00000497305 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
SHOC2-207ENST00000497305 PDIA6Q15084 440 aa9.28□□□□□ -0.92
SHOC2-207ENST00000497305 KRTAP9-9Q9BYP9 154 aa9.28□□□□□ -0.92
SHOC2-207ENST00000497305 KRTAP9-4Q9BYQ2 154 aa9.28□□□□□ -0.92
SHOC2-207ENST00000497305 KRTAP4-12Q9BQ66 201 aa9.27□□□□□ -0.93
SHOC2-207ENST00000497305 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
SHOC2-207ENST00000497305 FOXK2Q01167 660 aa9.23□□□□□ -0.93
SHOC2-207ENST00000497305 KRTAP4-8A0A0G2JLE6 195 aa9.22□□□□□ -0.93
SHOC2-207ENST00000497305 PUS10Q3MIT2 529 aaKnown RBP9.21□□□□□ -0.94
SHOC2-207ENST00000497305 Q8N3U1 123 aa9.21□□□□□ -0.94
SHOC2-207ENST00000497305 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
SHOC2-207ENST00000497305 SLC10A3P09131 477 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms