RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 PPLO60437 1756 aa23.82■■□□□ 1.4
LMNA-216ENST00000496738 MYOM2P54296 1465 aa23.81■■□□□ 1.4
LMNA-216ENST00000496738 C3P01024 1663 aa23.81■■□□□ 1.4
LMNA-216ENST00000496738 STAG3Q9UJ98 1225 aa23.81■■□□□ 1.4
LMNA-216ENST00000496738 USP47Q96K76 1375 aa23.81■■□□□ 1.4
LMNA-216ENST00000496738 TNRQ92752 1358 aa23.8■■□□□ 1.4
LMNA-216ENST00000496738 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
LMNA-216ENST00000496738 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
LMNA-216ENST00000496738 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
LMNA-216ENST00000496738 STAC3Q96MF2 364 aa23.77■■□□□ 1.4
LMNA-216ENST00000496738 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
LMNA-216ENST00000496738 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
LMNA-216ENST00000496738 NRXN1Q9ULB1 1477 aa23.74■■□□□ 1.39
LMNA-216ENST00000496738 A2ML1A8K2U0 1454 aa23.73■■□□□ 1.39
LMNA-216ENST00000496738 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
LMNA-216ENST00000496738 ADAMTSL3P82987 1691 aa23.72■■□□□ 1.39
LMNA-216ENST00000496738 PIK3C2GO75747 1445 aa23.7■■□□□ 1.38
LMNA-216ENST00000496738 LAMC1P11047 1609 aa23.7■■□□□ 1.38
LMNA-216ENST00000496738 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
LMNA-216ENST00000496738 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
LMNA-216ENST00000496738 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
LMNA-216ENST00000496738 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
LMNA-216ENST00000496738 KIAA1210Q9ULL0 1709 aa23.68■■□□□ 1.38
LMNA-216ENST00000496738 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
LMNA-216ENST00000496738 RIMS2Q9UQ26 1411 aa23.65■■□□□ 1.38
LMNA-216ENST00000496738 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
LMNA-216ENST00000496738 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
LMNA-216ENST00000496738 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
LMNA-216ENST00000496738 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
LMNA-216ENST00000496738 ZFYVE9O95405 1425 aa23.62■■□□□ 1.37
LMNA-216ENST00000496738 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
LMNA-216ENST00000496738 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
LMNA-216ENST00000496738 SCAF11Q99590 1463 aaKnown RBP23.6■■□□□ 1.37
LMNA-216ENST00000496738 CCDC7Q96M83 1385 aa23.6■■□□□ 1.37
LMNA-216ENST00000496738 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
LMNA-216ENST00000496738 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
LMNA-216ENST00000496738 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
LMNA-216ENST00000496738 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
LMNA-216ENST00000496738 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
LMNA-216ENST00000496738 TMEM2Q9UHN6 1383 aa23.56■■□□□ 1.36
LMNA-216ENST00000496738 POLR1AO95602 1720 aaPredicted RBP23.56■■□□□ 1.36
LMNA-216ENST00000496738 MIER1Q8N108 512 aa23.53■■□□□ 1.36
LMNA-216ENST00000496738 TRAK1Q9UPV9 953 aa23.53■■□□□ 1.36
LMNA-216ENST00000496738 PTPRMP28827 1452 aa23.53■■□□□ 1.36
LMNA-216ENST00000496738 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.365e-9■□□□□ 8
LMNA-216ENST00000496738 TESK2Q96S53 571 aa23.52■■□□□ 1.36
LMNA-216ENST00000496738 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
LMNA-216ENST00000496738 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
LMNA-216ENST00000496738 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
LMNA-216ENST00000496738 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
LMNA-216ENST00000496738 BCANQ96GW7 911 aa23.5■■□□□ 1.35
LMNA-216ENST00000496738 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
LMNA-216ENST00000496738 LTKP29376 864 aa23.49■■□□□ 1.35
LMNA-216ENST00000496738 HDGFP51858 240 aaKnown RBP23.49■■□□□ 1.35
LMNA-216ENST00000496738 STK26Q9P289 416 aa23.49■■□□□ 1.35
LMNA-216ENST00000496738 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
LMNA-216ENST00000496738 TXNDC2Q86VQ3 553 aa23.47■■□□□ 1.35
LMNA-216ENST00000496738 THEMISQ8N1K5 641 aaPredicted RBP23.47■■□□□ 1.35
LMNA-216ENST00000496738 SLIT1O75093 1534 aa23.45■■□□□ 1.34
LMNA-216ENST00000496738 TMF1P82094 1093 aa23.44■■□□□ 1.34
LMNA-216ENST00000496738 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
LMNA-216ENST00000496738 ARHGAP23Q9P227 1491 aa23.44■■□□□ 1.34
LMNA-216ENST00000496738 SETD1AO15047 1707 aaKnown RBP23.44■■□□□ 1.34
LMNA-216ENST00000496738 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
LMNA-216ENST00000496738 CENPJQ9HC77 1338 aaPredicted RBP23.42■■□□□ 1.34
LMNA-216ENST00000496738 ZNF142P52746 1687 aaPredicted RBP23.42■■□□□ 1.34
LMNA-216ENST00000496738 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
LMNA-216ENST00000496738 QRICH2Q9H0J4 1663 aa23.4■■□□□ 1.34
LMNA-216ENST00000496738 SAFB2Q14151 953 aaKnown RBP eCLIP23.4■■□□□ 1.34
LMNA-216ENST00000496738 METP08581 1390 aa23.4■■□□□ 1.34
LMNA-216ENST00000496738 PLEKHG1Q9ULL1 1385 aa23.4■■□□□ 1.34
LMNA-216ENST00000496738 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
LMNA-216ENST00000496738 ADAMTS13Q76LX8 1427 aa23.37■■□□□ 1.33
LMNA-216ENST00000496738 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
LMNA-216ENST00000496738 KDM4FA0A1W2PPD8 638 aa23.36■■□□□ 1.33
LMNA-216ENST00000496738 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
LMNA-216ENST00000496738 PRKCSHP14314 528 aaPredicted RBP23.33■■□□□ 1.33
LMNA-216ENST00000496738 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
LMNA-216ENST00000496738 ANP32CO43423 234 aa23.32■■□□□ 1.32
LMNA-216ENST00000496738 POGKQ9P215 609 aa23.32■■□□□ 1.32
LMNA-216ENST00000496738 CNGB1Q14028 1251 aaPredicted RBP23.31■■□□□ 1.32
LMNA-216ENST00000496738 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
LMNA-216ENST00000496738 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
LMNA-216ENST00000496738 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
LMNA-216ENST00000496738 MINK1Q8N4C8 1332 aaPredicted RBP23.28■■□□□ 1.32
LMNA-216ENST00000496738 CDCA8Q53HL2 280 aa23.28■■□□□ 1.32
LMNA-216ENST00000496738 PLEKHH1Q9ULM0 1364 aa23.28■■□□□ 1.32
LMNA-216ENST00000496738 MED14O60244 1454 aa23.28■■□□□ 1.32
LMNA-216ENST00000496738 ABCC11Q96J66 1382 aa23.27■■□□□ 1.31
LMNA-216ENST00000496738 TULP4Q9NRJ4 1543 aa23.26■■□□□ 1.31
LMNA-216ENST00000496738 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
LMNA-216ENST00000496738 MYOM1P52179 1685 aa23.24■■□□□ 1.31
LMNA-216ENST00000496738 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
LMNA-216ENST00000496738 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
LMNA-216ENST00000496738 KNDC1Q76NI1 1749 aa23.23■■□□□ 1.31
LMNA-216ENST00000496738 PANK3Q9H999 370 aa23.23■■□□□ 1.31
LMNA-216ENST00000496738 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
LMNA-216ENST00000496738 EVC2Q86UK5 1308 aa23.22■■□□□ 1.31
LMNA-216ENST00000496738 DIP2AQ14689 1571 aa23.22■■□□□ 1.31
LMNA-216ENST00000496738 NCKAP5LQ9HCH0 1330 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms