RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
RNF220-217ENST00000496262 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
RNF220-217ENST00000496262 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
RNF220-217ENST00000496262 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
RNF220-217ENST00000496262 KCNA6P17658 529 aa16.67■□□□□ 0.26
RNF220-217ENST00000496262 PROSER2Q86WR7 435 aaPredicted RBP16.67■□□□□ 0.26
RNF220-217ENST00000496262 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
RNF220-217ENST00000496262 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
RNF220-217ENST00000496262 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
RNF220-217ENST00000496262 E9PCH4 1651 aa16.65■□□□□ 0.26
RNF220-217ENST00000496262 NUP155O75694 1391 aa16.64■□□□□ 0.26
RNF220-217ENST00000496262 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
RNF220-217ENST00000496262 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
RNF220-217ENST00000496262 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
RNF220-217ENST00000496262 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
RNF220-217ENST00000496262 NWD1Q149M9 1564 aa16.62■□□□□ 0.25
RNF220-217ENST00000496262 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
RNF220-217ENST00000496262 HDGFP51858 240 aaKnown RBP16.61■□□□□ 0.25
RNF220-217ENST00000496262 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
RNF220-217ENST00000496262 MSH6P52701 1360 aa16.58■□□□□ 0.24
RNF220-217ENST00000496262 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
RNF220-217ENST00000496262 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
RNF220-217ENST00000496262 C14orf37Q86TY3 774 aa16.57■□□□□ 0.24
RNF220-217ENST00000496262 ADAMTS13Q76LX8 1427 aa16.54■□□□□ 0.24
RNF220-217ENST00000496262 TBX22Q9Y458 520 aa16.54■□□□□ 0.24
RNF220-217ENST00000496262 SLAIN2Q9P270 581 aa16.53■□□□□ 0.24
RNF220-217ENST00000496262 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
RNF220-217ENST00000496262 ZNF326Q5BKZ1 582 aaKnown RBP16.52■□□□□ 0.24
RNF220-217ENST00000496262 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
RNF220-217ENST00000496262 RRBP1Q9P2E9 1410 aaKnown RBP16.5■□□□□ 0.23
RNF220-217ENST00000496262 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
RNF220-217ENST00000496262 TRPM2O94759 1503 aa16.49■□□□□ 0.23
RNF220-217ENST00000496262 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
RNF220-217ENST00000496262 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
RNF220-217ENST00000496262 NAIPQ13075 1403 aa16.47■□□□□ 0.23
RNF220-217ENST00000496262 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
RNF220-217ENST00000496262 PTPRUQ92729 1446 aa16.46■□□□□ 0.23
RNF220-217ENST00000496262 ATF3P18847 181 aa16.46■□□□□ 0.23
RNF220-217ENST00000496262 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
RNF220-217ENST00000496262 PIK3R4Q99570 1358 aa16.46■□□□□ 0.23
RNF220-217ENST00000496262 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
RNF220-217ENST00000496262 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
RNF220-217ENST00000496262 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
RNF220-217ENST00000496262 NRXN3Q9Y4C0 1643 aa16.44■□□□□ 0.22
RNF220-217ENST00000496262 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.43■□□□□ 0.22
RNF220-217ENST00000496262 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
RNF220-217ENST00000496262 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
RNF220-217ENST00000496262 JCADQ9P266 1359 aa16.42■□□□□ 0.22
RNF220-217ENST00000496262 METP08581 1390 aa16.41■□□□□ 0.22
RNF220-217ENST00000496262 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
RNF220-217ENST00000496262 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
RNF220-217ENST00000496262 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
RNF220-217ENST00000496262 NEXMIFQ5QGS0 1516 aa16.4■□□□□ 0.22
RNF220-217ENST00000496262 HFM1A2PYH4 1435 aa16.39■□□□□ 0.21
RNF220-217ENST00000496262 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
RNF220-217ENST00000496262 HRCP23327 699 aa16.37■□□□□ 0.21
RNF220-217ENST00000496262 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
RNF220-217ENST00000496262 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
RNF220-217ENST00000496262 KIF1BO60333 1816 aa16.36■□□□□ 0.21
RNF220-217ENST00000496262 AHDC1Q5TGY3 1603 aaPredicted RBP16.36■□□□□ 0.21
RNF220-217ENST00000496262 LRP6O75581 1613 aa16.35■□□□□ 0.21
RNF220-217ENST00000496262 FOXD1Q16676 465 aa16.35■□□□□ 0.21
RNF220-217ENST00000496262 DCCP43146 1447 aa16.35■□□□□ 0.21
RNF220-217ENST00000496262 MST1RQ04912 1400 aa16.34■□□□□ 0.21
RNF220-217ENST00000496262 ASXL1Q8IXJ9 1541 aa16.34■□□□□ 0.21
RNF220-217ENST00000496262 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
RNF220-217ENST00000496262 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
RNF220-217ENST00000496262 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
RNF220-217ENST00000496262 SPATA31A6Q5VVP1 1343 aa16.33■□□□□ 0.2
RNF220-217ENST00000496262 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
RNF220-217ENST00000496262 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
RNF220-217ENST00000496262 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
RNF220-217ENST00000496262 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
RNF220-217ENST00000496262 SETD1AO15047 1707 aaKnown RBP16.29■□□□□ 0.2
RNF220-217ENST00000496262 SHPRHQ149N8 1683 aa16.29■□□□□ 0.2
RNF220-217ENST00000496262 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
RNF220-217ENST00000496262 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
RNF220-217ENST00000496262 PTCH1Q13635 1447 aa16.27■□□□□ 0.19
RNF220-217ENST00000496262 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
RNF220-217ENST00000496262 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
RNF220-217ENST00000496262 NHSL1Q5SYE7 1610 aa16.26■□□□□ 0.19
RNF220-217ENST00000496262 PPLO60437 1756 aa16.26■□□□□ 0.19
RNF220-217ENST00000496262 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
RNF220-217ENST00000496262 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
RNF220-217ENST00000496262 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
RNF220-217ENST00000496262 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
RNF220-217ENST00000496262 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
RNF220-217ENST00000496262 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
RNF220-217ENST00000496262 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
RNF220-217ENST00000496262 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
RNF220-217ENST00000496262 AFF2P51816 1311 aa16.21■□□□□ 0.19
RNF220-217ENST00000496262 C8orf37Q96NL8 207 aa16.21■□□□□ 0.19
RNF220-217ENST00000496262 STK26Q9P289 416 aa16.21■□□□□ 0.19
RNF220-217ENST00000496262 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
RNF220-217ENST00000496262 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
RNF220-217ENST00000496262 RXRBP28702 533 aa16.18■□□□□ 0.18
RNF220-217ENST00000496262 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
RNF220-217ENST00000496262 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
RNF220-217ENST00000496262 TMEM132EQ6IEE7 984 aa16.17■□□□□ 0.18
RNF220-217ENST00000496262 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms