RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
PRPF3-207ENST00000496202 RIMS2Q9UQ26 1411 aa14.11□□□□□ -0.15
PRPF3-207ENST00000496202 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
PRPF3-207ENST00000496202 TXNDC2Q86VQ3 553 aa14.1□□□□□ -0.15
PRPF3-207ENST00000496202 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
PRPF3-207ENST00000496202 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRPF3-207ENST00000496202 NEURL4Q96JN8 1562 aa14.08□□□□□ -0.16
PRPF3-207ENST00000496202 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
PRPF3-207ENST00000496202 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
PRPF3-207ENST00000496202 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
PRPF3-207ENST00000496202 BCANQ96GW7 911 aa14.07□□□□□ -0.16
PRPF3-207ENST00000496202 LTKP29376 864 aa14.06□□□□□ -0.16
PRPF3-207ENST00000496202 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
PRPF3-207ENST00000496202 SPATA31E1Q6ZUB1 1445 aa14.06□□□□□ -0.16
PRPF3-207ENST00000496202 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
PRPF3-207ENST00000496202 PPLO60437 1756 aa14.05□□□□□ -0.16
PRPF3-207ENST00000496202 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
PRPF3-207ENST00000496202 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
PRPF3-207ENST00000496202 MED14O60244 1454 aa14.05□□□□□ -0.16
PRPF3-207ENST00000496202 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
PRPF3-207ENST00000496202 IFT172Q9UG01 1749 aa14.02□□□□□ -0.16
PRPF3-207ENST00000496202 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
PRPF3-207ENST00000496202 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
PRPF3-207ENST00000496202 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
PRPF3-207ENST00000496202 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
PRPF3-207ENST00000496202 SETBP1Q9Y6X0 1596 aa13.98□□□□□ -0.17
PRPF3-207ENST00000496202 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
PRPF3-207ENST00000496202 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
PRPF3-207ENST00000496202 MYOM2P54296 1465 aa13.98□□□□□ -0.17
PRPF3-207ENST00000496202 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
PRPF3-207ENST00000496202 SLC26A8Q96RN1 970 aa13.97□□□□□ -0.17
PRPF3-207ENST00000496202 CLSPNQ9HAW4 1339 aa13.96□□□□□ -0.17
PRPF3-207ENST00000496202 TONSLQ96HA7 1378 aa13.96□□□□□ -0.18
PRPF3-207ENST00000496202 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
PRPF3-207ENST00000496202 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
PRPF3-207ENST00000496202 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
PRPF3-207ENST00000496202 ADGRF5Q8IZF2 1346 aa13.94□□□□□ -0.18
PRPF3-207ENST00000496202 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
PRPF3-207ENST00000496202 ZNF335Q9H4Z2 1342 aaPredicted RBP13.93□□□□□ -0.18
PRPF3-207ENST00000496202 TBX22Q9Y458 520 aa13.93□□□□□ -0.18
PRPF3-207ENST00000496202 LAMC1P11047 1609 aa13.93□□□□□ -0.18
PRPF3-207ENST00000496202 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
PRPF3-207ENST00000496202 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
PRPF3-207ENST00000496202 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
PRPF3-207ENST00000496202 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
PRPF3-207ENST00000496202 NRXN1Q9ULB1 1477 aa13.91□□□□□ -0.18
PRPF3-207ENST00000496202 CPS1P31327 1500 aa13.9□□□□□ -0.18
PRPF3-207ENST00000496202 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
PRPF3-207ENST00000496202 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
PRPF3-207ENST00000496202 NWD1Q149M9 1564 aa13.89□□□□□ -0.19
PRPF3-207ENST00000496202 KCNA6P17658 529 aa13.89□□□□□ -0.19
PRPF3-207ENST00000496202 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
PRPF3-207ENST00000496202 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
PRPF3-207ENST00000496202 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
PRPF3-207ENST00000496202 METP08581 1390 aa13.87□□□□□ -0.19
PRPF3-207ENST00000496202 PRAG1Q86YV5 1406 aa13.87□□□□□ -0.19
PRPF3-207ENST00000496202 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
PRPF3-207ENST00000496202 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
PRPF3-207ENST00000496202 XRN1Q8IZH2 1706 aaKnown RBP13.86□□□□□ -0.19
PRPF3-207ENST00000496202 KIAA1210Q9ULL0 1709 aa13.86□□□□□ -0.19
PRPF3-207ENST00000496202 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
PRPF3-207ENST00000496202 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
PRPF3-207ENST00000496202 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
PRPF3-207ENST00000496202 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-207ENST00000496202 ASXL1Q8IXJ9 1541 aa13.84□□□□□ -0.19
PRPF3-207ENST00000496202 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
PRPF3-207ENST00000496202 STK26Q9P289 416 aa13.83□□□□□ -0.2
PRPF3-207ENST00000496202 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
PRPF3-207ENST00000496202 LRRC7Q96NW7 1537 aa13.83□□□□□ -0.2
PRPF3-207ENST00000496202 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.2
PRPF3-207ENST00000496202 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
PRPF3-207ENST00000496202 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
PRPF3-207ENST00000496202 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
PRPF3-207ENST00000496202 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
PRPF3-207ENST00000496202 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
PRPF3-207ENST00000496202 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
PRPF3-207ENST00000496202 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
PRPF3-207ENST00000496202 IQSEC2Q5JU85 1478 aa13.8□□□□□ -0.2
PRPF3-207ENST00000496202 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
PRPF3-207ENST00000496202 XIRP1Q702N8 1843 aaKnown RBP13.79□□□□□ -0.2
PRPF3-207ENST00000496202 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
PRPF3-207ENST00000496202 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
PRPF3-207ENST00000496202 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
PRPF3-207ENST00000496202 TECPR2O15040 1411 aa13.78□□□□□ -0.2
PRPF3-207ENST00000496202 MSH6P52701 1360 aa13.77□□□□□ -0.21
PRPF3-207ENST00000496202 NBPF8Q3BBV2 869 aa13.77□□□□□ -0.21
PRPF3-207ENST00000496202 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
PRPF3-207ENST00000496202 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
PRPF3-207ENST00000496202 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
PRPF3-207ENST00000496202 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
PRPF3-207ENST00000496202 NBPF1Q3BBV0 1214 aa13.76□□□□□ -0.21
PRPF3-207ENST00000496202 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
PRPF3-207ENST00000496202 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
PRPF3-207ENST00000496202 POGKQ9P215 609 aa13.75□□□□□ -0.21
PRPF3-207ENST00000496202 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
PRPF3-207ENST00000496202 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
PRPF3-207ENST00000496202 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
PRPF3-207ENST00000496202 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
PRPF3-207ENST00000496202 CARD11Q9BXL7 1154 aa13.73□□□□□ -0.21
PRPF3-207ENST00000496202 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms