RNA–Protein interactions for RNA: ENST00000495123.5

PKP4-216, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-216ENST00000495123 HRCP23327 699 aa12.84□□□□□ -0.35
PKP4-216ENST00000495123 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
PKP4-216ENST00000495123 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
PKP4-216ENST00000495123 LTKP29376 864 aa12.83□□□□□ -0.36
PKP4-216ENST00000495123 MYO5BQ9ULV0 1848 aa12.82□□□□□ -0.36
PKP4-216ENST00000495123 MED14O60244 1454 aa12.81□□□□□ -0.36
PKP4-216ENST00000495123 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
PKP4-216ENST00000495123 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
PKP4-216ENST00000495123 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
PKP4-216ENST00000495123 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
PKP4-216ENST00000495123 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
PKP4-216ENST00000495123 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
PKP4-216ENST00000495123 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
PKP4-216ENST00000495123 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
PKP4-216ENST00000495123 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
PKP4-216ENST00000495123 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
PKP4-216ENST00000495123 KIF1BO60333 1816 aa12.76□□□□□ -0.37
PKP4-216ENST00000495123 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
PKP4-216ENST00000495123 NEXMIFQ5QGS0 1516 aa12.74□□□□□ -0.37
PKP4-216ENST00000495123 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
PKP4-216ENST00000495123 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
PKP4-216ENST00000495123 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
PKP4-216ENST00000495123 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
PKP4-216ENST00000495123 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
PKP4-216ENST00000495123 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
PKP4-216ENST00000495123 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
PKP4-216ENST00000495123 BCANQ96GW7 911 aa12.71□□□□□ -0.37
PKP4-216ENST00000495123 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
PKP4-216ENST00000495123 RGL3Q3MIN7 710 aa12.7□□□□□ -0.38
PKP4-216ENST00000495123 ADAMTS13Q76LX8 1427 aa12.7□□□□□ -0.38
PKP4-216ENST00000495123 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
PKP4-216ENST00000495123 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
PKP4-216ENST00000495123 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
PKP4-216ENST00000495123 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
PKP4-216ENST00000495123 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
PKP4-216ENST00000495123 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
PKP4-216ENST00000495123 PPLO60437 1756 aa12.68□□□□□ -0.38
PKP4-216ENST00000495123 SETBP1Q9Y6X0 1596 aa12.67□□□□□ -0.38
PKP4-216ENST00000495123 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
PKP4-216ENST00000495123 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
PKP4-216ENST00000495123 CPS1P31327 1500 aa12.66□□□□□ -0.38
PKP4-216ENST00000495123 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
PKP4-216ENST00000495123 DIP2AQ14689 1571 aa12.65□□□□□ -0.38
PKP4-216ENST00000495123 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
PKP4-216ENST00000495123 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
PKP4-216ENST00000495123 KCNA6P17658 529 aa12.63□□□□□ -0.39
PKP4-216ENST00000495123 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
PKP4-216ENST00000495123 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
PKP4-216ENST00000495123 METP08581 1390 aa12.62□□□□□ -0.39
PKP4-216ENST00000495123 SIN3AQ96ST3 1273 aa12.62□□□□□ -0.39
PKP4-216ENST00000495123 MYOM2P54296 1465 aa12.61□□□□□ -0.39
PKP4-216ENST00000495123 PIK3R4Q99570 1358 aa12.61□□□□□ -0.39
PKP4-216ENST00000495123 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
PKP4-216ENST00000495123 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
PKP4-216ENST00000495123 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
PKP4-216ENST00000495123 PIK3C2GO75747 1445 aa12.61□□□□□ -0.39
PKP4-216ENST00000495123 CHD2O14647 1828 aaKnown RBP12.6□□□□□ -0.39
PKP4-216ENST00000495123 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
PKP4-216ENST00000495123 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
PKP4-216ENST00000495123 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
PKP4-216ENST00000495123 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
PKP4-216ENST00000495123 ZBTB22O15209 634 aa12.59□□□□□ -0.39
PKP4-216ENST00000495123 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
PKP4-216ENST00000495123 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
PKP4-216ENST00000495123 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
PKP4-216ENST00000495123 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
PKP4-216ENST00000495123 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
PKP4-216ENST00000495123 TMEM94Q12767 1356 aa12.57□□□□□ -0.4
PKP4-216ENST00000495123 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
PKP4-216ENST00000495123 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
PKP4-216ENST00000495123 FBXO41Q8TF61 875 aa12.57□□□□□ -0.4
PKP4-216ENST00000495123 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
PKP4-216ENST00000495123 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
PKP4-216ENST00000495123 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
PKP4-216ENST00000495123 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
PKP4-216ENST00000495123 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
PKP4-216ENST00000495123 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
PKP4-216ENST00000495123 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
PKP4-216ENST00000495123 L3MBTL2Q969R5 705 aa12.53□□□□□ -0.4
PKP4-216ENST00000495123 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
PKP4-216ENST00000495123 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.41
PKP4-216ENST00000495123 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.41
PKP4-216ENST00000495123 LAMC1P11047 1609 aa12.51□□□□□ -0.41
PKP4-216ENST00000495123 STK26Q9P289 416 aa12.51□□□□□ -0.41
PKP4-216ENST00000495123 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
PKP4-216ENST00000495123 PTCH1Q13635 1447 aa12.51□□□□□ -0.41
PKP4-216ENST00000495123 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
PKP4-216ENST00000495123 YTHDC2Q9H6S0 1430 aaKnown RBP12.5□□□□□ -0.41
PKP4-216ENST00000495123 ADGRB1O14514 1584 aa12.5□□□□□ -0.41
PKP4-216ENST00000495123 TECPR2O15040 1411 aa12.49□□□□□ -0.41
PKP4-216ENST00000495123 MSH6P52701 1360 aa12.49□□□□□ -0.41
PKP4-216ENST00000495123 TOM1O60784 492 aa12.49□□□□□ -0.41
PKP4-216ENST00000495123 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
PKP4-216ENST00000495123 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
PKP4-216ENST00000495123 PIP4K2BP78356 416 aa12.48□□□□□ -0.41
PKP4-216ENST00000495123 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
PKP4-216ENST00000495123 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
PKP4-216ENST00000495123 PLEKHH1Q9ULM0 1364 aa12.47□□□□□ -0.41
PKP4-216ENST00000495123 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
PKP4-216ENST00000495123 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms