RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
SUPT20H-222ENST00000495071 ATP10AO60312 1499 aa17.46■□□□□ 0.39
SUPT20H-222ENST00000495071 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
SUPT20H-222ENST00000495071 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
SUPT20H-222ENST00000495071 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
SUPT20H-222ENST00000495071 KIF3BO15066 747 aa17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 FAM161AQ3B820 660 aa17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 PLCH2O75038 1416 aa17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 KANK1Q14678 1352 aa17.45■□□□□ 0.38
SUPT20H-222ENST00000495071 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
SUPT20H-222ENST00000495071 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
SUPT20H-222ENST00000495071 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
SUPT20H-222ENST00000495071 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
SUPT20H-222ENST00000495071 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
SUPT20H-222ENST00000495071 BCAR3O75815 825 aa17.42■□□□□ 0.38
SUPT20H-222ENST00000495071 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
SUPT20H-222ENST00000495071 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
SUPT20H-222ENST00000495071 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
SUPT20H-222ENST00000495071 E9PSI1 815 aa17.41■□□□□ 0.38
SUPT20H-222ENST00000495071 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
SUPT20H-222ENST00000495071 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
SUPT20H-222ENST00000495071 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
SUPT20H-222ENST00000495071 SLC24A1O60721 1099 aa17.39■□□□□ 0.37
SUPT20H-222ENST00000495071 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
SUPT20H-222ENST00000495071 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
SUPT20H-222ENST00000495071 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
SUPT20H-222ENST00000495071 NFKBIBQ15653 356 aa17.37■□□□□ 0.37
SUPT20H-222ENST00000495071 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
SUPT20H-222ENST00000495071 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
SUPT20H-222ENST00000495071 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
SUPT20H-222ENST00000495071 NKTRP30414 1462 aaKnown RBP17.36■□□□□ 0.37
SUPT20H-222ENST00000495071 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
SUPT20H-222ENST00000495071 RNF17Q9BXT8 1623 aaKnown RBP17.35■□□□□ 0.37
SUPT20H-222ENST00000495071 CHD1O14646 1710 aa17.35■□□□□ 0.37
SUPT20H-222ENST00000495071 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
SUPT20H-222ENST00000495071 ADGRF5Q8IZF2 1346 aa17.35■□□□□ 0.37
SUPT20H-222ENST00000495071 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
SUPT20H-222ENST00000495071 SYNMO15061 1565 aa17.34■□□□□ 0.37
SUPT20H-222ENST00000495071 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
SUPT20H-222ENST00000495071 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
SUPT20H-222ENST00000495071 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.37
SUPT20H-222ENST00000495071 ABCC1P33527 1531 aa17.33■□□□□ 0.37
SUPT20H-222ENST00000495071 CARD14Q9BXL6 1004 aa17.33■□□□□ 0.36
SUPT20H-222ENST00000495071 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
SUPT20H-222ENST00000495071 TRPM2O94759 1503 aa17.33■□□□□ 0.36
SUPT20H-222ENST00000495071 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
SUPT20H-222ENST00000495071 PANK1Q8TE04 598 aa17.33■□□□□ 0.36
SUPT20H-222ENST00000495071 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
SUPT20H-222ENST00000495071 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
SUPT20H-222ENST00000495071 GSE1Q14687 1217 aa17.32■□□□□ 0.36
SUPT20H-222ENST00000495071 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
SUPT20H-222ENST00000495071 PTPRTO14522 1441 aa17.3■□□□□ 0.36
SUPT20H-222ENST00000495071 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
SUPT20H-222ENST00000495071 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
SUPT20H-222ENST00000495071 IGHDP01880 384 aa17.29■□□□□ 0.36
SUPT20H-222ENST00000495071 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
SUPT20H-222ENST00000495071 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
SUPT20H-222ENST00000495071 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
SUPT20H-222ENST00000495071 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
SUPT20H-222ENST00000495071 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
SUPT20H-222ENST00000495071 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
SUPT20H-222ENST00000495071 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
SUPT20H-222ENST00000495071 ZCCHC11Q5TAX3 1644 aaKnown RBP17.26■□□□□ 0.35
SUPT20H-222ENST00000495071 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 SPHKAPQ2M3C7 1700 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 ZFYVE16Q7Z3T8 1539 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
SUPT20H-222ENST00000495071 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 FANCAO15360 1455 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 NSD3Q9BZ95 1437 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 GGT6Q6P531 493 aa17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 UPF2Q9HAU5 1272 aaKnown RBP17.24■□□□□ 0.35
SUPT20H-222ENST00000495071 BECN1Q14457 450 aa17.23■□□□□ 0.35
SUPT20H-222ENST00000495071 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
SUPT20H-222ENST00000495071 CEP152O94986 1710 aa17.22■□□□□ 0.35
SUPT20H-222ENST00000495071 BRPF3Q9ULD4 1205 aa17.22■□□□□ 0.35
SUPT20H-222ENST00000495071 MTHFSP49914 203 aa17.22■□□□□ 0.35
SUPT20H-222ENST00000495071 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
SUPT20H-222ENST00000495071 ATP7AQ04656 1500 aa17.21■□□□□ 0.35
SUPT20H-222ENST00000495071 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
SUPT20H-222ENST00000495071 ADGRL1O94910 1474 aa17.21■□□□□ 0.34
SUPT20H-222ENST00000495071 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 SLKQ9H2G2 1235 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 TET3O43151 1660 aa17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 NOS1P29475 1434 aa17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
SUPT20H-222ENST00000495071 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms