RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 ARHGEF5Q12774 1597 aa9.48□□□□□ -0.89
PNKD-208ENST00000494954 EIF2AK4Q9P2K8 1649 aaKnown RBP9.48□□□□□ -0.89
PNKD-208ENST00000494954 ZNF644Q9H582 1327 aaPredicted RBP9.47□□□□□ -0.89
PNKD-208ENST00000494954 COL16A1Q07092 1604 aaPredicted RBP9.46□□□□□ -0.89
PNKD-208ENST00000494954 MROH1Q8NDA8 1641 aa9.46□□□□□ -0.89
PNKD-208ENST00000494954 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.9
PNKD-208ENST00000494954 LRP6O75581 1613 aa9.45□□□□□ -0.9
PNKD-208ENST00000494954 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
PNKD-208ENST00000494954 SLAIN2Q9P270 581 aa9.45□□□□□ -0.9
PNKD-208ENST00000494954 EID1Q9Y6B2 187 aa9.45□□□□□ -0.9
PNKD-208ENST00000494954 EHBP1L1Q8N3D4 1523 aa9.45□□□□□ -0.9
PNKD-208ENST00000494954 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
PNKD-208ENST00000494954 MTUS2Q5JR59 1369 aa9.44□□□□□ -0.9
PNKD-208ENST00000494954 AHDC1Q5TGY3 1603 aaPredicted RBP9.44□□□□□ -0.9
PNKD-208ENST00000494954 ZBTB22O15209 634 aa9.43□□□□□ -0.9
PNKD-208ENST00000494954 MSH6P52701 1360 aa9.42□□□□□ -0.9
PNKD-208ENST00000494954 RXRBP28702 533 aa9.42□□□□□ -0.9
PNKD-208ENST00000494954 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
PNKD-208ENST00000494954 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
PNKD-208ENST00000494954 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
PNKD-208ENST00000494954 EFCAB6Q5THR3 1501 aa9.4□□□□□ -0.91
PNKD-208ENST00000494954 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 TSPY4P0CV99 314 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 TSPY10P0CW01 314 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
PNKD-208ENST00000494954 PHLPP1O60346 1717 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 DCCP43146 1447 aa9.39□□□□□ -0.91
PNKD-208ENST00000494954 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
PNKD-208ENST00000494954 NOS1P29475 1434 aa9.38□□□□□ -0.91
PNKD-208ENST00000494954 ERBINQ96RT1 1412 aa9.38□□□□□ -0.91
PNKD-208ENST00000494954 PIK3R4Q99570 1358 aa9.37□□□□□ -0.91
PNKD-208ENST00000494954 DUOX2Q9NRD8 1548 aa9.37□□□□□ -0.91
PNKD-208ENST00000494954 RGS12O14924 1447 aa9.37□□□□□ -0.91
PNKD-208ENST00000494954 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
PNKD-208ENST00000494954 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
PNKD-208ENST00000494954 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
PNKD-208ENST00000494954 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
PNKD-208ENST00000494954 PIK3C2BO00750 1634 aa9.35□□□□□ -0.91
PNKD-208ENST00000494954 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
PNKD-208ENST00000494954 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
PNKD-208ENST00000494954 SLC52A1Q9NWF4 448 aa9.35□□□□□ -0.91
PNKD-208ENST00000494954 TBX22Q9Y458 520 aa9.35□□□□□ -0.91
PNKD-208ENST00000494954 IDI1Q13907 227 aa9.34□□□□□ -0.91
PNKD-208ENST00000494954 ADGRB3O60242 1522 aa9.34□□□□□ -0.91
PNKD-208ENST00000494954 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
PNKD-208ENST00000494954 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
PNKD-208ENST00000494954 RPRD2Q5VT52 1461 aaKnown RBP9.33□□□□□ -0.92
PNKD-208ENST00000494954 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
PNKD-208ENST00000494954 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
PNKD-208ENST00000494954 AFF2P51816 1311 aa9.31□□□□□ -0.92
PNKD-208ENST00000494954 MEX3CQ5U5Q3 659 aaKnown RBP9.31□□□□□ -0.92
PNKD-208ENST00000494954 BRINP3Q76B58 766 aa9.31□□□□□ -0.92
PNKD-208ENST00000494954 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
PNKD-208ENST00000494954 EP400Q96L91 3159 aa9.31□□□□□ -0.92
PNKD-208ENST00000494954 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
PNKD-208ENST00000494954 MYOM3Q5VTT5 1437 aa9.31□□□□□ -0.92
PNKD-208ENST00000494954 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
PNKD-208ENST00000494954 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
PNKD-208ENST00000494954 CEP152O94986 1710 aa9.29□□□□□ -0.92
PNKD-208ENST00000494954 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
PNKD-208ENST00000494954 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
PNKD-208ENST00000494954 LRP5O75197 1615 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 LAMC1P11047 1609 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 KANK1Q14678 1352 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 KIF15Q9NS87 1388 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 ASXL1Q8IXJ9 1541 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
PNKD-208ENST00000494954 QTRT2Q9H974 415 aaKnown RBP9.28□□□□□ -0.92
PNKD-208ENST00000494954 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
PNKD-208ENST00000494954 PNPLA6Q8IY17 1366 aa9.27□□□□□ -0.93
PNKD-208ENST00000494954 ATF3P18847 181 aa9.27□□□□□ -0.93
PNKD-208ENST00000494954 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.93
PNKD-208ENST00000494954 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.26□□□□□ -0.93
PNKD-208ENST00000494954 MST1RQ04912 1400 aa9.26□□□□□ -0.93
PNKD-208ENST00000494954 PTCH1Q13635 1447 aa9.26□□□□□ -0.93
PNKD-208ENST00000494954 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
PNKD-208ENST00000494954 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
PNKD-208ENST00000494954 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
PNKD-208ENST00000494954 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
PNKD-208ENST00000494954 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
PNKD-208ENST00000494954 ATRNO75882 1429 aa9.25□□□□□ -0.93
PNKD-208ENST00000494954 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
PNKD-208ENST00000494954 RIMS2Q9UQ26 1411 aa9.24□□□□□ -0.93
PNKD-208ENST00000494954 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
PNKD-208ENST00000494954 TRPC5Q9UL62 973 aaPredicted RBP9.23□□□□□ -0.93
PNKD-208ENST00000494954 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
PNKD-208ENST00000494954 ABCC5O15440 1437 aa9.22□□□□□ -0.93
PNKD-208ENST00000494954 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
PNKD-208ENST00000494954 TRPM2O94759 1503 aa9.22□□□□□ -0.93
PNKD-208ENST00000494954 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
PNKD-208ENST00000494954 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
PNKD-208ENST00000494954 ADGRL3Q9HAR2 1447 aa9.21□□□□□ -0.94
PNKD-208ENST00000494954 XRN1Q8IZH2 1706 aaKnown RBP9.2□□□□□ -0.94
PNKD-208ENST00000494954 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
PNKD-208ENST00000494954 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
PNKD-208ENST00000494954 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
PNKD-208ENST00000494954 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
PNKD-208ENST00000494954 PTPRUQ92729 1446 aa9.2□□□□□ -0.94
PNKD-208ENST00000494954 ADGRL2O95490 1459 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms