RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 MLH3Q9UHC1 1453 aa7.94□□□□□ -1.14
RUNX1-217ENST00000494829 NPM1P06748 294 aaKnown RBP eCLIP7.94□□□□□ -1.14
RUNX1-217ENST00000494829 TSPOAP1O95153 1857 aa7.94□□□□□ -1.14
RUNX1-217ENST00000494829 PER1O15534 1290 aaPredicted RBP7.93□□□□□ -1.14
RUNX1-217ENST00000494829 GGT6Q6P531 493 aa7.93□□□□□ -1.14
RUNX1-217ENST00000494829 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
RUNX1-217ENST00000494829 MYOM1P52179 1685 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 ABCC3O15438 1527 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 IRX6P78412 446 aaPredicted RBP7.92□□□□□ -1.14
RUNX1-217ENST00000494829 FKBP8Q14318 412 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 SYNMO15061 1565 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 CFAP74Q9C0B2 1584 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 DIP2BQ9P265 1576 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 CFAP70Q5T0N1 1121 aa7.92□□□□□ -1.14
RUNX1-217ENST00000494829 KIF1BO60333 1816 aa7.91□□□□□ -1.14
RUNX1-217ENST00000494829 CAMSAP1Q5T5Y3 1602 aa7.91□□□□□ -1.14
RUNX1-217ENST00000494829 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
RUNX1-217ENST00000494829 NUTM2DQ5VT03 806 aaPredicted RBP7.9□□□□□ -1.14
RUNX1-217ENST00000494829 MYO5BQ9ULV0 1848 aa7.9□□□□□ -1.14
RUNX1-217ENST00000494829 NEO1Q92859 1461 aa7.9□□□□□ -1.14
RUNX1-217ENST00000494829 PPLO60437 1756 aa7.9□□□□□ -1.15
RUNX1-217ENST00000494829 NOS1P29475 1434 aa7.89□□□□□ -1.15
RUNX1-217ENST00000494829 ARID4BQ4LE39 1312 aaPredicted RBP7.89□□□□□ -1.15
RUNX1-217ENST00000494829 PNISRQ8TF01 805 aaKnown RBP7.89□□□□□ -1.15
RUNX1-217ENST00000494829 NRXN1Q9ULB1 1477 aa7.89□□□□□ -1.15
RUNX1-217ENST00000494829 KANK1Q14678 1352 aa7.89□□□□□ -1.15
RUNX1-217ENST00000494829 MYCNP04198 464 aaPredicted RBP7.89□□□□□ -1.15
RUNX1-217ENST00000494829 PANK3Q9H999 370 aa7.89□□□□□ -1.15
RUNX1-217ENST00000494829 PIK3C2BO00750 1634 aa7.88□□□□□ -1.15
RUNX1-217ENST00000494829 GLI2P10070 1586 aa7.88□□□□□ -1.15
RUNX1-217ENST00000494829 PARD3Q8TEW0 1356 aa7.88□□□□□ -1.15
RUNX1-217ENST00000494829 FAM69CQ0P6D2 419 aa7.88□□□□□ -1.15
RUNX1-217ENST00000494829 CC2D1BQ5T0F9 858 aaKnown RBP7.88□□□□□ -1.15
RUNX1-217ENST00000494829 NEURL4Q96JN8 1562 aa7.88□□□□□ -1.15
RUNX1-217ENST00000494829 MYOM2P54296 1465 aa7.87□□□□□ -1.15
RUNX1-217ENST00000494829 KIF13AQ9H1H9 1805 aa7.87□□□□□ -1.15
RUNX1-217ENST00000494829 KIAA1210Q9ULL0 1709 aa7.87□□□□□ -1.15
RUNX1-217ENST00000494829 SCAF11Q99590 1463 aaKnown RBP7.87□□□□□ -1.15
RUNX1-217ENST00000494829 ADGRB1O14514 1584 aa7.86□□□□□ -1.15
RUNX1-217ENST00000494829 ERVK-7P63135 1459 aa7.86□□□□□ -1.15
RUNX1-217ENST00000494829 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
RUNX1-217ENST00000494829 LRPPRCP42704 1394 aaKnown RBP7.86□□□□□ -1.15
RUNX1-217ENST00000494829 WASHC2CQ9Y4E1 1318 aa7.86□□□□□ -1.15
RUNX1-217ENST00000494829 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
RUNX1-217ENST00000494829 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
RUNX1-217ENST00000494829 ZBED9Q6R2W3 1325 aa7.85□□□□□ -1.15
RUNX1-217ENST00000494829 PIK3C2GO75747 1445 aa7.85□□□□□ -1.15
RUNX1-217ENST00000494829 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
RUNX1-217ENST00000494829 ZC3H13Q5T200 1668 aaKnown RBP7.85□□□□□ -1.15
RUNX1-217ENST00000494829 ASXL1Q8IXJ9 1541 aa7.84□□□□□ -1.15
RUNX1-217ENST00000494829 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
RUNX1-217ENST00000494829 MYBBP1AQ9BQG0 1328 aaKnown RBP7.84□□□□□ -1.15
RUNX1-217ENST00000494829 IDI1Q13907 227 aa7.84□□□□□ -1.15
RUNX1-217ENST00000494829 AMER1Q5JTC6 1135 aaPredicted RBP7.84□□□□□ -1.15
RUNX1-217ENST00000494829 MYO3AQ8NEV4 1616 aa7.83□□□□□ -1.16
RUNX1-217ENST00000494829 ZMYM4Q5VZL5 1548 aa7.83□□□□□ -1.16
RUNX1-217ENST00000494829 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
RUNX1-217ENST00000494829 TMF1P82094 1093 aa7.83□□□□□ -1.16
RUNX1-217ENST00000494829 TRAK1Q9UPV9 953 aa7.82□□□□□ -1.16
RUNX1-217ENST00000494829 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
RUNX1-217ENST00000494829 TMEM131LA2VDJ0 1609 aa7.82□□□□□ -1.16
RUNX1-217ENST00000494829 QRICH2Q9H0J4 1663 aa7.82□□□□□ -1.16
RUNX1-217ENST00000494829 TMC1Q8TDI8 760 aa7.82□□□□□ -1.16
RUNX1-217ENST00000494829 TSHZ2Q9NRE2 1034 aa7.82□□□□□ -1.16
RUNX1-217ENST00000494829 KDM5AP29375 1690 aaKnown RBP7.82□□□□□ -1.16
RUNX1-217ENST00000494829 BRD4O60885 1362 aaPredicted RBP7.81□□□□□ -1.16
RUNX1-217ENST00000494829 CLTCQ00610 1675 aaKnown RBP7.81□□□□□ -1.16
RUNX1-217ENST00000494829 ARHGEF28Q8N1W1 1705 aaKnown RBP7.81□□□□□ -1.16
RUNX1-217ENST00000494829 KTN1Q86UP2 1357 aaKnown RBP7.81□□□□□ -1.16
RUNX1-217ENST00000494829 C14orf93Q9H972 538 aaKnown RBP7.8□□□□□ -1.16
RUNX1-217ENST00000494829 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
RUNX1-217ENST00000494829 RALBP1Q15311 655 aa7.8□□□□□ -1.16
RUNX1-217ENST00000494829 TULP4Q9NRJ4 1543 aa7.8□□□□□ -1.16
RUNX1-217ENST00000494829 ARHGAP31Q2M1Z3 1444 aa7.8□□□□□ -1.16
RUNX1-217ENST00000494829 CDCA7LQ96GN5 454 aa7.79□□□□□ -1.16
RUNX1-217ENST00000494829 MLECQ14165 292 aa7.79□□□□□ -1.16
RUNX1-217ENST00000494829 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
RUNX1-217ENST00000494829 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
RUNX1-217ENST00000494829 NLRP13Q86W25 1043 aa7.78□□□□□ -1.16
RUNX1-217ENST00000494829 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
RUNX1-217ENST00000494829 BLMP54132 1417 aaPredicted RBP7.77□□□□□ -1.17
RUNX1-217ENST00000494829 SAFB2Q14151 953 aaKnown RBP eCLIP7.77□□□□□ -1.17
RUNX1-217ENST00000494829 ADAMTS8Q9UP79 889 aa7.77□□□□□ -1.17
RUNX1-217ENST00000494829 PTPRMP28827 1452 aa7.77□□□□□ -1.17
RUNX1-217ENST00000494829 CENPJQ9HC77 1338 aaPredicted RBP7.76□□□□□ -1.17
RUNX1-217ENST00000494829 SETD1AO15047 1707 aaKnown RBP7.76□□□□□ -1.17
RUNX1-217ENST00000494829 NUDCQ9Y266 331 aa7.76□□□□□ -1.17
RUNX1-217ENST00000494829 REREQ9P2R6 1566 aa7.76□□□□□ -1.17
RUNX1-217ENST00000494829 PLEKHH1Q9ULM0 1364 aa7.76□□□□□ -1.17
RUNX1-217ENST00000494829 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 STAC3Q96MF2 364 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 STK26Q9P289 416 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 ARHGEF40Q8TER5 1519 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 NRXN3Q9Y4C0 1643 aa7.75□□□□□ -1.17
RUNX1-217ENST00000494829 EIF3AQ14152 1382 aaKnown RBP7.75□□□□□ -1.17
RUNX1-217ENST00000494829 SHPRHQ149N8 1683 aa7.74□□□□□ -1.17
RUNX1-217ENST00000494829 AGLP35573 1532 aa7.74□□□□□ -1.17
RUNX1-217ENST00000494829 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
RUNX1-217ENST00000494829 RTN4Q9NQC3 1192 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms