RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
RAPGEF3-213ENST00000494764 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
RAPGEF3-213ENST00000494764 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.46
RAPGEF3-213ENST00000494764 ITGAEP38570 1179 aa17.88■□□□□ 0.45
RAPGEF3-213ENST00000494764 MYO5BQ9ULV0 1848 aa17.87■□□□□ 0.45
RAPGEF3-213ENST00000494764 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAPGEF3-213ENST00000494764 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
RAPGEF3-213ENST00000494764 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
RAPGEF3-213ENST00000494764 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
RAPGEF3-213ENST00000494764 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
RAPGEF3-213ENST00000494764 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
RAPGEF3-213ENST00000494764 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
RAPGEF3-213ENST00000494764 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
RAPGEF3-213ENST00000494764 MSH6P52701 1360 aa17.83■□□□□ 0.45
RAPGEF3-213ENST00000494764 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
RAPGEF3-213ENST00000494764 ZFYVE9O95405 1425 aa17.82■□□□□ 0.44
RAPGEF3-213ENST00000494764 NUP155O75694 1391 aa17.82■□□□□ 0.44
RAPGEF3-213ENST00000494764 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
RAPGEF3-213ENST00000494764 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
RAPGEF3-213ENST00000494764 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
RAPGEF3-213ENST00000494764 UNC13BO14795 1591 aa17.81■□□□□ 0.44
RAPGEF3-213ENST00000494764 C14orf37Q86TY3 774 aa17.8■□□□□ 0.44
RAPGEF3-213ENST00000494764 RGS17Q9UGC6 210 aaPredicted RBP17.8■□□□□ 0.44
RAPGEF3-213ENST00000494764 E9PCH4 1651 aa17.8■□□□□ 0.44
RAPGEF3-213ENST00000494764 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
RAPGEF3-213ENST00000494764 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
RAPGEF3-213ENST00000494764 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
RAPGEF3-213ENST00000494764 NCOA3Q9Y6Q9 1424 aa17.74■□□□□ 0.43
RAPGEF3-213ENST00000494764 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
RAPGEF3-213ENST00000494764 ATF3P18847 181 aa17.73■□□□□ 0.43
RAPGEF3-213ENST00000494764 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
RAPGEF3-213ENST00000494764 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
RAPGEF3-213ENST00000494764 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
RAPGEF3-213ENST00000494764 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
RAPGEF3-213ENST00000494764 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
RAPGEF3-213ENST00000494764 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
RAPGEF3-213ENST00000494764 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
RAPGEF3-213ENST00000494764 JCADQ9P266 1359 aa17.7■□□□□ 0.42
RAPGEF3-213ENST00000494764 DIP2AQ14689 1571 aa17.69■□□□□ 0.42
RAPGEF3-213ENST00000494764 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
RAPGEF3-213ENST00000494764 TRPM2O94759 1503 aa17.67■□□□□ 0.42
RAPGEF3-213ENST00000494764 SPHKAPQ2M3C7 1700 aa17.65■□□□□ 0.42
RAPGEF3-213ENST00000494764 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
RAPGEF3-213ENST00000494764 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
RAPGEF3-213ENST00000494764 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
RAPGEF3-213ENST00000494764 SPATA31A6Q5VVP1 1343 aa17.62■□□□□ 0.41
RAPGEF3-213ENST00000494764 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
RAPGEF3-213ENST00000494764 COL16A1Q07092 1604 aaPredicted RBP17.6■□□□□ 0.41
RAPGEF3-213ENST00000494764 KIF1BO60333 1816 aa17.58■□□□□ 0.41
RAPGEF3-213ENST00000494764 METP08581 1390 aa17.58■□□□□ 0.4
RAPGEF3-213ENST00000494764 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
RAPGEF3-213ENST00000494764 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
RAPGEF3-213ENST00000494764 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
RAPGEF3-213ENST00000494764 NAIPQ13075 1403 aa17.57■□□□□ 0.4
RAPGEF3-213ENST00000494764 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
RAPGEF3-213ENST00000494764 VGFO15240 615 aaPredicted RBP17.57■□□□□ 0.4
RAPGEF3-213ENST00000494764 NUTM2BA6NNL0 878 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF3-213ENST00000494764 NUTM2EB1AL46 878 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF3-213ENST00000494764 NUTM2AQ8IVF1 878 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF3-213ENST00000494764 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF3-213ENST00000494764 DCCP43146 1447 aa17.55■□□□□ 0.4
RAPGEF3-213ENST00000494764 CLTCL1P53675 1640 aa17.55■□□□□ 0.4
RAPGEF3-213ENST00000494764 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
RAPGEF3-213ENST00000494764 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
RAPGEF3-213ENST00000494764 XRN1Q8IZH2 1706 aaKnown RBP17.54■□□□□ 0.4
RAPGEF3-213ENST00000494764 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
RAPGEF3-213ENST00000494764 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
RAPGEF3-213ENST00000494764 LRP6O75581 1613 aa17.52■□□□□ 0.4
RAPGEF3-213ENST00000494764 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
RAPGEF3-213ENST00000494764 MST1RQ04912 1400 aa17.51■□□□□ 0.39
RAPGEF3-213ENST00000494764 RXRBP28702 533 aa17.5■□□□□ 0.39
RAPGEF3-213ENST00000494764 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
RAPGEF3-213ENST00000494764 DDX17Q92841 729 aaKnown RBP17.49■□□□□ 0.39
RAPGEF3-213ENST00000494764 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
RAPGEF3-213ENST00000494764 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
RAPGEF3-213ENST00000494764 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
RAPGEF3-213ENST00000494764 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
RAPGEF3-213ENST00000494764 AFF2P51816 1311 aa17.46■□□□□ 0.38
RAPGEF3-213ENST00000494764 FOXD1Q16676 465 aa17.45■□□□□ 0.38
RAPGEF3-213ENST00000494764 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
RAPGEF3-213ENST00000494764 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
RAPGEF3-213ENST00000494764 ORAI2Q96SN7 254 aa17.44■□□□□ 0.38
RAPGEF3-213ENST00000494764 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
RAPGEF3-213ENST00000494764 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
RAPGEF3-213ENST00000494764 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
RAPGEF3-213ENST00000494764 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
RAPGEF3-213ENST00000494764 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
RAPGEF3-213ENST00000494764 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
RAPGEF3-213ENST00000494764 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
RAPGEF3-213ENST00000494764 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
RAPGEF3-213ENST00000494764 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
RAPGEF3-213ENST00000494764 PPLO60437 1756 aa17.4■□□□□ 0.38
RAPGEF3-213ENST00000494764 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
RAPGEF3-213ENST00000494764 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
RAPGEF3-213ENST00000494764 RBM6P78332 1123 aaKnown RBP17.38■□□□□ 0.37
RAPGEF3-213ENST00000494764 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
RAPGEF3-213ENST00000494764 STK26Q9P289 416 aa17.38■□□□□ 0.37
RAPGEF3-213ENST00000494764 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
RAPGEF3-213ENST00000494764 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
RAPGEF3-213ENST00000494764 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms